STK39, chr2:168810530-169104651 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35421756 chr2:169114387 STK39 [+9736bp] C - 13 T vs. C 0.167 (C) 0.417 (C) >1 (-) 0 (-) >0.05
rs1850437 chr2:169116027 STK39 [+11376bp] C - 13 A vs. T 0.167 (A) 0.417 (A) <1 (-) 0 (-) >0.05
rs4668037 chr2:169019755 STK39 C - 13 A vs. G 0.142 (G) 0.425 (A) <1 (-) 8 (-) >0.05
rs2138751 chr2:169117706 STK39 [+13055bp] C - 13 A vs. C 0.183 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs1980184 chr2:169004577 STK39 C - 13 A vs. G 0.3 (G) 0.25 (A) <1 (-) 0 (-) >0.05
rs3820869 chr2:169011708 STK39 C - 13 A vs. G 0.275 (A) 0.258 (G) >1 (-) 6 (-) >0.05
rs3820874 chr2:169008120 STK39 C - 13 A vs. G - - >1 (-) 13 (-) >0.05
rs58675964 chr2:168958201 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs3820875 chr2:169008062 STK39 C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs932167 chr2:169065468 STK39 C - 13 A vs. C 0.25 (C) 0.492 (C) <1 (-) 10 (-) >0.05
rs6714707 chr2:169010297 STK39 C - 13 A vs. G 0.275 (A) 0.258 (G) >1 (-) 4 (-) >0.05
rs6720467 chr2:168962268 STK39 C - 13 C vs. G 0.358 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs140213358 chr2:169036750 STK39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4668032 chr2:169010968 STK39 C - 13 T vs. C 0.275 (T) 0.267 (C) >1 (-) 4 (-) >0.05
rs6714609 chr2:169010250 STK39 C - 13 A vs. G 0.275 (A) 0.258 (G) >1 (-) 4 (-) >0.05
rs144540815 chr2:169120390 STK39 [+15739bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs12472535 chr2:168960998 STK39 C - 13 A vs. G 0.017 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs6729022 chr2:168955558 STK39 C - 13 T vs. C 0.35 (C) 0.208 (C) >1 (-) 0 (-) >0.05
rs150754078 chr2:168959332 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs10186426 chr2:169012427 STK39 C - 13 C vs. G 0.267 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs4458184 chr2:169140909 STK39 [+36258bp] C - 13 A vs. C 0.15 (A) 0.4 (A) <1 (-) 0 (-) >0.05
rs112159018 chr2:168813157 STK39 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs13400831 chr2:168781939 STK39 [-28591bp] C - 13 T vs. C 0.117 (T) 0.342 (T) <1 (-) 5 (-) >0.05
rs1517330 chr2:169002552 STK39 C - 13 T vs. C 0.3 (C) 0.258 (T) <1 (-) 1 (-) >0.05
rs3820862 chr2:169014955 STK39 C - 13 A vs. G 0.483 (A) 0.317 (G) >1 (-) 0 (-) >0.05
rs149099668 chr2:168825201 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11689980 chr2:168950700 STK39 C - 13 T vs. C 0.35 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs3769406 chr2:168998267 STK39 C - 13 T vs. C 0.383 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs13012071 chr2:168945989 STK39 C - 13 A vs. G 0.433 (A) 0.492 (A) <1 (-) 0 (-) >0.05
rs10930310 chr2:169049741 STK39 C - 13 A vs. G 0.258 (A) 0.483 (A) >1 (-) 11 (-) >0.05
rs2218701 chr2:169015118 STK39 C - 13 T vs. C 0.483 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs6705543 chr2:168953440 STK39 C - 13 C vs. G 0.358 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs3820866 chr2:169011878 STK39 C - 13 T vs. C 0.267 (T) 0.258 (C) >1 (-) 8 (-) >0.05
rs3754787 chr2:168927779 STK39 C - 13 A vs. G 0.467 (A) 0.467 (G) >1 (-) 0 (-) >0.05
rs6759844 chr2:169007547 STK39 C - 13 T vs. C 0.3 (T) 0.258 (C) >1 (-) 0 (-) >0.05
rs78829428 chr2:168954941 STK39 C - 13 A vs. G - 0.092 (A) >1 (-) 0 (-) >0.05
rs66682533 chr2:168925117 STK39 C - 13 C vs. G 0.467 (C) 0.467 (C) >1 (-) 0 (-) >0.05
rs73974505 chr2:169083373 STK39 C - 12 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs16854798 chr2:169001183 STK39 C - 13 A vs. G 0.158 (G) 0.467 (G) >1 (-) 26 (-) >0.05
rs41466544 chr2:169078318 STK39 C - 13 A vs. C 0.017 (C) 0.258 (C) >1 (-) 8 (-) >0.05
rs4668030 chr2:169009051 STK39 C - 13 T vs. C 0.3 (C) 0.258 (T) <1 (-) 0 (-) >0.05
rs76132578 chr2:168809569 STK39 [-961bp] C - 8 T vs. C 0.017 (C) - <1 (-) 12 (-) >0.05
rs2271742 chr2:169078634 STK39 C - 13 T vs. G 0.017 (G) 0.267 (G) >1 (-) 9 (-) >0.05
rs3769417 chr2:168922696 STK39 C - 13 C vs. G 0.458 (C) 0.458 (G) >1 (-) 0 (-) >0.05
rs34268490 chr2:169023263 STK39 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs6720684 chr2:168962486 STK39 C - 13 T vs. C 0.233 (C) 0.275 (C) >1 (-) 13 (-) >0.05
rs16855142 chr2:169072684 STK39 C - 12 A vs. G - 0.208 (G) <1 (-) 0 (-) >0.05
rs72889640 chr2:168955312 STK39 C - 13 A vs. T 0.35 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs4473354 chr2:168958950 STK39 C - 13 T vs. G 0.233 (G) 0.275 (G) >1 (-) 12 (-) >0.05
rs1400642 chr2:169015554 STK39 C - 13 A vs. G 0.483 (A) 0.325 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]