STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6749447 chr2:169041386 STK39 C - 13 T vs. G 0.267 (G) 0.267 (T) <1 (-) 11 (-) >0.05
rs76445891 chr2:168981066 STK39 C - 13 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs28656402 chr2:169041140 STK39 C - 13 A vs. C 0.25 (C) 0.483 (C) <1 (-) 11 (-) >0.05
rs34752169 chr2:169118135 STK39 [+13484bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2063962 chr2:169042663 STK39 C - 13 A vs. G 0.267 (G) 0.267 (A) <1 (-) 10 (-) >0.05
rs7603464 chr2:168976170 STK39 C - 13 T vs. C 0.225 (C) 0.275 (C) >1 (-) 19 (-) >0.05
rs1375305 chr2:168962896 STK39 C - 13 A vs. T 0.225 (T) 0.275 (T) >1 (-) 13 (-) >0.05
rs6720689 chr2:168962501 STK39 C - 13 T vs. C 0.233 (C) 0.275 (C) >1 (-) 13 (-) >0.05
rs7584694 chr2:169087090 STK39 C - 13 T vs. C 0.025 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs144970495 chr2:169001767 STK39 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs16854955 chr2:169017405 STK39 C - 13 C vs. G 0.15 (G) 0.425 (C) <1 (-) 0 (-) >0.05
rs10170391 chr2:169009426 STK39 C - 13 A vs. C 0.3 (C) 0.258 (A) <1 (-) 0 (-) >0.05
rs12472933 chr2:169073948 STK39 C - 13 C vs. G 0.017 (C) 0.317 (C) <1 (-) 8 (-) >0.05
rs4668027 chr2:169008838 STK39 C - 13 A vs. G 0.3 (G) 0.258 (A) <1 (-) 0 (-) >0.05
rs1517342 chr2:169015673 STK39 C - 13 T vs. C 0.483 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs1375306 chr2:168962996 STK39 C - 13 C vs. G 0.225 (G) 0.275 (G) >1 (-) 13 (-) >0.05
rs10181389 chr2:168847388 STK39 C - 13 A vs. G 0.108 (G) - <1 (-) 22 (-) >0.05
rs79892518 chr2:169011684 STK39 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs4668028 chr2:169008873 STK39 C - 13 T vs. C 0.3 (T) 0.258 (C) >1 (-) 0 (-) >0.05
rs1517343 chr2:169015975 STK39 C - 13 A vs. C 0.483 (A) 0.317 (C) >1 (-) 0 (-) >0.05
rs57495486 chr2:169073343 STK39 C - 13 T vs. C - 0.317 (C) >1 (-) 8 (-) >0.05
rs883406 chr2:169044118 STK39 C - 13 T vs. G 0.258 (T) 0.483 (T) >1 (-) 7 (-) >0.05
rs111687404 chr2:169019445 STK39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4668026 chr2:169005917 STK39 C - 13 T vs. G 0.3 (G) 0.258 (T) <1 (-) 0 (-) >0.05
rs60337139 chr2:168950334 STK39 C - 13 A vs. G - 0.117 (A) >1 (-) 0 (-) >0.05
rs2166963 chr2:169000293 STK39 C - 13 A vs. G 0.158 (A) 0.467 (A) <1 (-) 26 (-) >0.05
rs10183510 chr2:168777505 STK39 [-33025bp] C - 13 A vs. G 0.117 (A) 0.35 (A) <1 (-) 9 (-) >0.05
rs6735283 chr2:169008612 STK39 C - 13 A vs. C 0.3 (C) 0.258 (A) <1 (-) 0 (-) >0.05
rs7574739 chr2:169088235 STK39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs755844 chr2:168973071 STK39 C - 13 A vs. G 0.2 (A) 0.275 (A) <1 (-) 21 (-) >0.05
rs836660 chr2:168769921 B3GALT1 [+39370bp] C - 13 T vs. C 0.117 (T) 0.342 (T) <1 (-) 12 (-) >0.05
rs140268762 chr2:169019334 STK39 C - 8 C vs. G - - <1 (-) 0 (-) >0.05
rs1448829 chr2:168924072 STK39 C - 13 T vs. C 0.425 (C) 0.3 (C) >1 (-) 23 (-) >0.05
rs74271813 chr2:169139423 STK39 [+34772bp] C - 11 A vs. G 0.008 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs1878485 chr2:169088773 STK39 C - 13 T vs. G 0.025 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs836657 chr2:168766987 B3GALT1 [+36436bp] C - 13 A vs. G 0.117 (A) 0.317 (A) <1 (-) 11 (-) >0.05
rs13415961 chr2:168839047 STK39 C - 13 A vs. G 0.1 (A) 0.05 (A) >1 (-) 17 (-) >0.05
rs836656 chr2:168766922 B3GALT1 [+36371bp] C - 13 T vs. C 0.117 (T) 0.342 (T) <1 (-) 11 (-) >0.05
rs836651 chr2:168764579 B3GALT1 [+34028bp] C - 13 T vs. C 0.25 (C) 0.417 (T) >1 (-) 11 (-) >0.05
rs836650 chr2:168761499 B3GALT1 [+30948bp] C - 13 A vs. G 0.242 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs3820867 chr2:169011797 STK39 C - 13 A vs. G 0.275 (A) 0.258 (G) >1 (-) 8 (-) >0.05
rs10190697 chr2:169089488 STK39 C - 13 A vs. T 0.433 (T) 0.025 (A) <1 (-) 0 (-) >0.05
rs78336721 chr2:168860392 STK39 C - 5 A vs. T 0.008 (A) - >1 (-) 0 (-) >0.05
rs836659 chr2:168769366 B3GALT1 [+38815bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 12 (-) >0.05
rs13397321 chr2:168833658 STK39 C - 13 T vs. C 0.1 (T) - >1 (-) 16 (-) >0.05
rs7566359 chr2:168827087 STK39 C - 13 A vs. G 0.1 (A) 0.042 (A) >1 (-) 19 (-) >0.05
rs4667551 chr2:168904622 STK39 C - 13 T vs. C 0.458 (T) 0.458 (C) >1 (-) 0 (-) >0.05
rs12470474 chr2:168782952 STK39 [-27578bp] C - 13 A vs. G 0.117 (A) 0.35 (A) <1 (-) 3 (-) >0.05
rs142334954 chr2:168847759 STK39 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs6721678 chr2:169008421 STK39 C - 13 T vs. C 0.158 (C) 0.467 (C) >1 (-) 23 (-) >0.05

Association studies for this region [+]