STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4668001 chr2:168890141 STK39 C - 13 A vs. C 0.425 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs116716436 chr2:168978281 STK39 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11894600 chr2:168784354 STK39 [-26176bp] C - 13 A vs. C 0.117 (A) 0.375 (A) <1 (-) 5 (-) >0.05
rs3754783 chr2:169004780 STK39 C - 13 A vs. G 0.158 (A) 0.467 (A) <1 (-) 23 (-) >0.05
rs6433045 chr2:169065424 STK39 C - 13 C vs. G 0.258 (C) 0.25 (G) >1 (-) 15 (-) >0.05
rs7595087 chr2:168779981 STK39 [-30549bp] C - 13 T vs. C 0.117 (T) 0.35 (T) <1 (-) 9 (-) >0.05
rs10183952 chr2:168830575 STK39 C - 13 T vs. G 0.1 (T) - >1 (-) 18 (-) >0.05
rs1982363 chr2:169005618 STK39 C - 13 A vs. C 0.158 (C) 0.467 (C) >1 (-) 24 (-) >0.05
rs17176633 chr2:168924785 STK39 C - 13 T vs. C 0.408 (C) 0.3 (C) >1 (-) 13 (-) >0.05
rs3769395 chr2:169004125 STK39 C - 13 T vs. C 0.158 (T) 0.475 (T) <1 (-) 24 (-) >0.05
rs1980185 chr2:169004743 STK39 C - 13 A vs. T 0.158 (T) 0.467 (T) >1 (-) 24 (-) >0.05
rs56841252 chr2:169076720 STK39 C - 11 A vs. C - 0.225 (C) <1 (-) 0 (-) >0.05
rs1517332 chr2:169006578 STK39 C - 13 C vs. G 0.158 (G) 0.483 (G) >1 (-) 24 (-) >0.05
rs13025138 chr2:168953557 STK39 C - 13 T vs. C 0.217 (T) 0.292 (T) <1 (-) 15 (-) >0.05
rs7585301 chr2:168938056 STK39 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1517333 chr2:169006589 STK39 C - 13 A vs. G 0.158 (A) 0.458 (A) <1 (-) 24 (-) >0.05
rs836663 chr2:168771396 STK39 [-39134bp] C - 13 C vs. G 0.117 (G) 0.333 (G) >1 (-) 9 (-) >0.05
rs10209838 chr2:168770694 STK39 [-39836bp] C - 13 T vs. G 0.117 (T) - <1 (-) 10 (-) >0.05
rs73026962 chr2:168836839 STK39 C - 13 T vs. C 0.108 (C) 0.05 (C) <1 (-) 17 (-) >0.05
rs836664 chr2:168772522 STK39 [-38008bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 10 (-) >0.05
rs13411094 chr2:168842790 STK39 C - 13 C vs. G 0.1 (C) - >1 (-) 18 (-) >0.05
rs13411544 chr2:168843231 STK39 C - 13 C vs. G 0.1 (C) - >1 (-) 18 (-) >0.05
rs6759822 chr2:169007493 STK39 C - 13 T vs. C 0.158 (T) 0.467 (T) <1 (-) 26 (-) >0.05
rs6709658 chr2:168778156 STK39 [-32374bp] C - 13 A vs. C 0.117 (C) 0.35 (C) >1 (-) 8 (-) >0.05
rs57103025 chr2:168873920 STK39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2003041 chr2:168774114 STK39 [-36416bp] C - 13 A vs. G - - <1 (-) 8 (-) >0.05
rs115001313 chr2:169029646 STK39 C - 10 A vs. C 0.025 (A) - <1 (-) 0 (-) >0.05
rs10930298 chr2:168782771 STK39 [-27759bp] C - 13 C vs. G 0.117 (G) 0.342 (G) >1 (-) 5 (-) >0.05
rs12469385 chr2:168782380 STK39 [-28150bp] C - 13 C vs. G 0.117 (G) 0.342 (G) >1 (-) 5 (-) >0.05
rs4667546 chr2:168871394 STK39 C - 13 A vs. T 0.317 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs17780260 chr2:168889270 STK39 C - 13 A vs. G 0.425 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs67604740 chr2:168781624 STK39 [-28906bp] C - 13 T vs. C 0.117 (C) 0.342 (C) >1 (-) 5 (-) >0.05
rs73971320 chr2:168995826 STK39 C - 13 T vs. C 0.15 (T) 0.183 (T) <1 (-) 25 (-) >0.05
rs10192828 chr2:168831283 STK39 C - 13 A vs. G 0.1 (G) - <1 (-) 15 (-) >0.05
rs3820877 chr2:168999019 STK39 C - 13 A vs. C 0.15 (A) 0.208 (A) <1 (-) 25 (-) >0.05
rs13410459 chr2:168780638 STK39 [-29892bp] C - 13 T vs. C 0.117 (C) 0.35 (C) >1 (-) 5 (-) >0.05
rs59651415 chr2:168780498 STK39 [-30032bp] C - 13 A vs. G 0.117 (A) 0.35 (A) <1 (-) 6 (-) >0.05
rs61083861 chr2:168780784 STK39 [-29746bp] C - 13 A vs. T 0.117 (T) 0.35 (T) >1 (-) 5 (-) >0.05
rs1829227 chr2:169084484 STK39 C - 11 A vs. G - 0.217 (G) <1 (-) 0 (-) >0.05
rs1375307 chr2:168901973 STK39 C - 13 A vs. T 0.458 (T) 0.417 (A) <1 (-) 0 (-) >0.05
rs4668011 chr2:168906315 STK39 C - 13 A vs. C 0.458 (C) 0.5 (C) <1 (-) 0 (-) >0.05
rs77522615 chr2:168763390 B3GALT1 [+32839bp] C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs139977193 chr2:169113849 STK39 [+9198bp] C - 8 A vs. T - - >1 (-) 0 (-) >0.05
rs9287890 chr2:168840576 STK39 C - 13 T vs. C 0.1 (C) - <1 (-) 18 (-) >0.05
rs59242759 chr2:168995860 STK39 C - 13 T vs. G 0.15 (T) 0.183 (T) <1 (-) 25 (-) >0.05
rs3769402 chr2:168999344 STK39 C - 13 A vs. T 0.15 (T) 0.208 (T) >1 (-) 24 (-) >0.05
rs4667552 chr2:168905440 STK39 C - 13 A vs. G 0.458 (G) 0.442 (A) <1 (-) 0 (-) >0.05
rs4668010 chr2:168905410 STK39 C - 13 T vs. C 0.458 (C) 0.45 (T) <1 (-) 0 (-) >0.05
rs11681917 chr2:168899683 STK39 C - 13 A vs. C 0.467 (C) 0.475 (A) <1 (-) 0 (-) >0.05
rs10170500 chr2:169009565 STK39 C - 13 A vs. G 0.158 (G) 0.467 (G) >1 (-) 24 (-) >0.05

Association studies for this region [+]