STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4668009 chr2:168901077 STK39 C - 13 A vs. C 0.458 (A) 0.425 (C) >1 (-) 0 (-) >0.05
rs2390625 chr2:168865141 STK39 C - 6 C vs. G - - <1 (-) 69 (-) >0.05
rs2592340 chr2:168769822 B3GALT1 [+39271bp] C - 13 A vs. G 0.117 (G) 0.325 (G) >1 (-) 11 (-) >0.05
rs143864865 chr2:169097332 STK39 C - 9 T vs. G - - >1 (-) 14 (-) >0.05
rs2615310 chr2:168769820 B3GALT1 [+39269bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 11 (-) >0.05
rs10497334 chr2:168841536 STK39 C - 13 T vs. C 0.1 (T) - >1 (-) 19 (-) >0.05
rs715878 chr2:168906641 STK39 C - 13 A vs. G 0.458 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs10803828 chr2:168788824 STK39 [-21706bp] C - 13 A vs. C 0.108 (A) 0.375 (A) <1 (-) 2 (-) >0.05
rs1375309 chr2:168870639 STK39 C - 13 A vs. G 0.467 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs4668012 chr2:168906402 STK39 C - 13 T vs. C 0.458 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs11684495 chr2:168903351 STK39 C - 13 T vs. G 0.467 (T) 0.458 (G) >1 (-) 0 (-) >0.05
rs16854770 chr2:168986767 STK39 C - 13 T vs. G 0.008 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs6728947 chr2:169059511 STK39 C - 13 C vs. G 0.383 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs13429840 chr2:168848540 STK39 C - 13 A vs. G 0.108 (A) - >1 (-) 16 (-) >0.05
rs10201836 chr2:168846526 STK39 C - 13 A vs. C 0.108 (A) - >1 (-) 17 (-) >0.05
rs2615307 chr2:168774393 STK39 [-36137bp] C - 13 T vs. C 0.117 (C) 0.35 (C) >1 (-) 7 (-) >0.05
rs10193683 chr2:168796136 STK39 [-14394bp] C - 13 A vs. G 0.108 (G) 0.408 (G) >1 (-) 10 (-) >0.05
rs1517331 chr2:169002591 STK39 C - 13 T vs. C 0.15 (C) 0.208 (C) >1 (-) 24 (-) >0.05
rs7576460 chr2:168775061 STK39 [-35469bp] C - 13 A vs. C 0.117 (A) 0.35 (A) <1 (-) 7 (-) >0.05
rs1838836 chr2:168764274 B3GALT1 [+33723bp] C - 13 A vs. G 0.233 (A) 0.417 (G) <1 (-) 0 (-) >0.05
rs13410387 chr2:168849603 STK39 C - 13 A vs. G 0.108 (G) - <1 (-) 15 (-) >0.05
rs149817186 chr2:168847349 STK39 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs72887645 chr2:168896494 STK39 C - 13 T vs. C 0.467 (T) 0.275 (C) >1 (-) 0 (-) >0.05
rs4365431 chr2:168786418 STK39 [-24112bp] C - 13 T vs. C 0.108 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs925845 chr2:169003473 STK39 C - 13 T vs. C 0.292 (T) 0.258 (C) >1 (-) 10 (-) >0.05
rs114155183 chr2:168965045 STK39 C - 9 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs62176382 chr2:169149444 STK39 [+44793bp] C - 13 C vs. G 0.025 (C) - >1 (-) 0 (-) >0.05
rs138547576 chr2:169027865 STK39 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs6730927 chr2:168827478 STK39 C - 13 T vs. C 0.1 (C) 0.3 (C) <1 (-) 31 (-) >0.05
rs16854702 chr2:168949234 STK39 C - 13 A vs. C 0.167 (C) 0.225 (C) >1 (-) 39 (-) >0.05
rs11680653 chr2:168899250 STK39 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs115993170 chr2:168955485 STK39 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs935635 chr2:168972347 STK39 C - 13 T vs. C 0.217 (T) 0.275 (T) <1 (-) 22 (-) >0.05
rs3769396 chr2:169002934 STK39 C - 13 T vs. C 0.158 (C) 0.467 (C) >1 (-) 22 (-) >0.05
rs11681973 chr2:168899808 STK39 C - 13 C vs. G 0.467 (C) 0.475 (G) >1 (-) 0 (-) >0.05
rs6745679 chr2:168861014 STK39 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs10930304 chr2:168900135 STK39 C - 13 T vs. C 0.492 (C) 0.417 (T) <1 (-) 0 (-) >0.05
rs148349083 chr2:168978855 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4667549 chr2:168898060 STK39 C - 13 A vs. C 0.467 (A) 0.417 (C) >1 (-) 0 (-) >0.05
rs2390636 chr2:168973102 STK39 C - 13 A vs. G 0.217 (G) 0.275 (G) >1 (-) 23 (-) >0.05
rs4668000 chr2:168865278 STK39 C - 13 C vs. G 0.458 (C) 0.45 (G) >1 (-) 0 (-) >0.05
rs16854567 chr2:168876118 STK39 C - 13 A vs. G 0.458 (G) 0.45 (A) <1 (-) 0 (-) >0.05
rs836658 chr2:168768897 B3GALT1 [+38346bp] C - 13 T vs. G 0.117 (T) 0.342 (T) <1 (-) 15 (-) >0.05
rs17779495 chr2:168856424 STK39 C - 13 A vs. G 0.442 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs10189877 chr2:169004355 STK39 C - 5 T vs. C - 0.242 (C) >1 (-) 0 (-) >0.05
rs908595 chr2:168999201 STK39 C - 13 T vs. C 0.275 (T) 0.467 (T) >1 (-) 12 (-) >0.05
rs1584433 chr2:168895356 STK39 C - 13 A vs. T 0.467 (T) 0.483 (A) <1 (-) 0 (-) >0.05
rs6433027 chr2:168864360 STK39 C - 13 T vs. C 0.458 (T) 0.475 (C) >1 (-) 0 (-) >0.05
rs56226629 chr2:168896584 STK39 C - 13 T vs. C 0.467 (T) 0.467 (C) >1 (-) 0 (-) >0.05
rs6715433 chr2:169085707 STK39 C - 10 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]