STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10191775 chr2:168901190 STK39 C - 13 A vs. G 0.108 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs10191673 chr2:168929246 STK39 C - 13 T vs. C 0.108 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs6433038 chr2:169026594 STK39 C - 13 A vs. G 0.275 (G) 0.208 (A) <1 (-) 0 (-) >0.05
rs6712452 chr2:169011495 STK39 C - 13 T vs. C 0.275 (C) 0.267 (T) <1 (-) 13 (-) >0.05
rs1517338 chr2:168987593 STK39 C - 13 T vs. G 0.225 (T) 0.217 (T) <1 (-) 42 (-) >0.05
rs59087209 chr2:168815659 STK39 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs10209013 chr2:168983685 STK39 C - 13 A vs. G 0.225 (G) 0.208 (G) >1 (-) 41 (-) >0.05
rs138995244 chr2:168940253 STK39 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs141238382 chr2:169139141 STK39 [+34490bp] C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs16855010 chr2:169025545 STK39 C - 8 T vs. C - 0.25 (C) >1 (-) 4 (-) >0.05
rs6718279 chr2:168833081 STK39 C - 10 A vs. G - 0.283 (A) >1 (-) 1 (-) >0.05
rs13399144 chr2:168792069 STK39 [-18461bp] C - 13 A vs. G - - >1 (-) 24 (-) >0.05
rs76678524 chr2:168817899 STK39 C - 12 A vs. C - 0.275 (C) <1 (-) 0 (-) >0.05
rs112988707 chr2:169072213 STK39 C - 12 A vs. G 0.025 (A) - <1 (-) 35 (-) >0.05
rs144857634 chr2:168968537 STK39 C - 12 T vs. C - - <1 (-) 13 (-) >0.05
rs7565986 chr2:168855387 STK39 C - 13 T vs. C 0.342 (C) 0.225 (C) <1 (-) 15 (-) >0.05
rs10180407 chr2:168900967 STK39 C - 13 T vs. C 0.108 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs16854564 chr2:168873763 STK39 C - 13 A vs. G 0.133 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs10209630 chr2:169012258 STK39 C - 13 A vs. C 0.133 (C) 0.208 (C) >1 (-) 14 (-) >0.05
rs143275535 chr2:169058559 STK39 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs113263454 chr2:168981425 STK39 C - 11 T vs. C - - <1 (-) 21 (-) >0.05
rs7600857 chr2:168993122 STK39 C - 13 A vs. G 0.3 (G) 0.233 (A) <1 (-) 12 (-) >0.05
rs142514418 chr2:169079849 STK39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4613237 chr2:168875986 STK39 C - 13 T vs. C 0.017 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs6433040 chr2:169026745 STK39 C - 13 T vs. C 0.275 (C) 0.208 (T) <1 (-) 0 (-) >0.05
rs6741771 chr2:169133031 STK39 [+28380bp] C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs6433037 chr2:169026571 STK39 C - 13 A vs. C 0.267 (C) 0.2 (A) <1 (-) 0 (-) >0.05
rs16854601 chr2:168902921 STK39 C - 13 T vs. G 0.108 (T) - >1 (-) 0 (-) >0.05
rs1517324 chr2:169096848 STK39 C - 13 C vs. G 0.308 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs17176048 chr2:168903152 STK39 C - 13 A vs. T 0.108 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs73029006 chr2:168870358 STK39 C - 13 A vs. G 0.117 (G) - <1 (-) 0 (-) >0.05
rs6433036 chr2:169026567 STK39 C - 13 A vs. C 0.267 (A) 0.2 (C) >1 (-) 0 (-) >0.05
rs116347569 chr2:168851961 STK39 C - 3 A vs. C 0.033 (C) - >1 (-) 56 (-) >0.05
rs16854412 chr2:168821780 STK39 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs149340495 chr2:169015192 STK39 C - 10 A vs. G - - >1 (-) 5 (-) >0.05
rs13419175 chr2:168987939 STK39 C - 13 A vs. C 0.225 (A) 0.208 (A) <1 (-) 41 (-) >0.05
rs3769415 chr2:168989217 STK39 C - 13 C vs. G 0.225 (G) 0.217 (G) >1 (-) 41 (-) >0.05
rs17179976 chr2:169006217 STK39 C - 10 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs16854551 chr2:168871546 STK39 C - 13 T vs. C 0.117 (T) - >1 (-) 0 (-) >0.05
rs2063964 chr2:169071120 STK39 C - 9 T vs. C 0.0 (T) 0.0 (T) <1 (-) 0 (-) >0.05
rs56285833 chr2:169151668 STK39 [+47017bp] C - 13 A vs. T 0.275 (T) 0.075 (T) >1 (-) 0 (-) >0.05
chr2:168915458 chr2:168915458 STK39 C - 7 T vs. G - - <1 (-) 14 (-) >0.05
rs6751071 chr2:168900838 STK39 C - 13 T vs. C 0.117 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs55735908 chr2:169153032 STK39 [+48381bp] C - 13 A vs. G 0.275 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs11885304 chr2:168955835 STK39 C - 12 T vs. C - - <1 (-) 10 (-) >0.05
rs7604572 chr2:168823532 STK39 C - 12 T vs. C 0.008 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs12472379 chr2:168937679 STK39 C - 13 T vs. C 0.008 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs73017376 chr2:168898167 STK39 C - 13 T vs. C 0.117 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs79762792 chr2:169031688 STK39 C - 3 A vs. G - - >1 (-) 78 (-) >0.05
rs77391674 chr2:168822415 STK39 C - 12 T vs. C 0.008 (C) 0.275 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]