STK39, chr2:168810530-169104651 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148672158 chr2:169050886 STK39 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs72876940 chr2:169057162 STK39 C - 13 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs4668056 chr2:169152469 STK39 [+47818bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs2724167 chr2:169145689 STK39 [+41038bp] C - 13 A vs. T 0.433 (A) 0.392 (A) >1 (-) 0 (-) <0.05
rs2102809 chr2:169153690 STK39 [+49039bp] C - 13 A vs. T 0.442 (A) 0.392 (A) >1 (-) 0 (-) <0.05
rs10930319 chr2:169151572 STK39 [+46921bp] C - 13 C vs. G 0.442 (C) 0.392 (C) >1 (-) 0 (-) <0.05
rs116737270 chr2:169141130 STK39 [+36479bp] C - 9 T vs. C 0.025 (C) - <1 (-) 0 (-) <0.05
rs148943514 chr2:168853338 STK39 C - 6 A vs. G - - >1 (-) 0 (-) <0.05
rs72876955 chr2:169071106 STK39 C - 13 T vs. G 0.058 (G) - >1 (-) 0 (-) <0.05
rs114129736 chr2:168858419 STK39 C - 6 T vs. C 0.008 (C) - <1 (-) 0 (-) <0.05
rs72876935 chr2:169044336 STK39 C - 13 A vs. G 0.075 (A) - <1 (-) 0 (-) <0.05
rs80048861 chr2:168914704 STK39 C - 6 C vs. G - - <1 (-) 0 (-) <0.05
rs74708459 chr2:169012923 STK39 C - 13 C vs. G 0.075 (C) - <1 (-) 0 (-) <0.05
rs72872746 chr2:168979913 STK39 C - 13 A vs. G 0.1 (A) - <1 (-) 34 (-) <0.05
rs6433046 chr2:169077854 STK39 C - 13 A vs. G 0.133 (G) 0.258 (G) <1 (-) 28 (-) <0.05
rs6738424 chr2:168978779 STK39 C - 13 A vs. G 0.408 (G) 0.367 (G) <1 (-) 8 (-) <0.05
rs1400641 chr2:169006841 STK39 C - 13 A vs. G 0.142 (G) 0.275 (G) <1 (-) 38 (-) <0.05
rs12692875 chr2:168969429 STK39 C - 13 T vs. G 0.417 (T) 0.375 (T) >1 (-) 8 (-) <0.05
rs1448827 chr2:168967639 STK39 C - 13 T vs. C 0.417 (C) 0.383 (C) <1 (-) 9 (-) <0.05
rs6710064 chr2:168971832 STK39 C - 13 A vs. G 0.417 (G) 0.383 (G) <1 (-) 8 (-) <0.05
rs2012981 chr2:168969093 STK39 C - 13 T vs. G - - >1 (-) 8 (-) <0.05
rs35103310 chr2:168965039 STK39 C - 13 T vs. C 0.417 (T) 0.375 (T) >1 (-) 9 (-) <0.05
rs6751710 chr2:168975305 STK39 C - 13 A vs. G 0.417 (A) 0.367 (A) >1 (-) 0 (-) <0.05
rs35470423 chr2:168965081 STK39 C - 13 T vs. G 0.408 (G) 0.375 (G) <1 (-) 11 (-) <0.05
rs935636 chr2:168966516 STK39 C - 13 T vs. C 0.417 (T) 0.375 (T) >1 (-) 10 (-) <0.05
rs3820861 chr2:169016450 STK39 C - 13 A vs. T 0.133 (T) 0.283 (T) <1 (-) 30 (-) <0.05
rs114221780 chr2:168952397 STK39 C - 12 T vs. C 0.008 (T) - >1 (-) 17 (-) <0.05
rs3820860 chr2:169016460 STK39 C - 13 T vs. C 0.133 (T) 0.283 (T) >1 (-) 30 (-) <0.05
rs16855122 chr2:169067946 STK39 C - 13 T vs. C 0.125 (T) 0.275 (T) >1 (-) 26 (-) <0.05
rs13034253 chr2:169067496 STK39 C - 13 A vs. C 0.125 (C) 0.275 (C) <1 (-) 26 (-) <0.05
rs71430617 chr2:169014435 STK39 C - 13 T vs. C 0.125 (C) 0.283 (C) <1 (-) 35 (-) <0.05
rs17782237 chr2:168965151 STK39 C - 13 A vs. G 0.417 (A) 0.375 (A) >1 (-) 12 (-) <0.05
rs2122081 chr2:168972174 STK39 C - 13 C vs. G 0.417 (C) 0.383 (C) >1 (-) 11 (-) <0.05
rs13022764 chr2:169023476 STK39 C - 13 A vs. G 0.133 (G) 0.283 (G) <1 (-) 30 (-) <0.05
rs13023468 chr2:169023549 STK39 C - 13 A vs. G 0.133 (A) 0.283 (A) >1 (-) 30 (-) <0.05
rs13023246 chr2:169023442 STK39 C - 13 A vs. G 0.133 (A) 0.283 (A) >1 (-) 30 (-) <0.05
rs16854951 chr2:169017369 STK39 C - 13 A vs. T 0.133 (T) 0.283 (T) <1 (-) 29 (-) <0.05
rs77278474 chr2:169017460 STK39 C - 13 A vs. G 0.117 (A) 0.275 (A) >1 (-) 29 (-) <0.05
rs3820859 chr2:169016969 STK39 C - 13 C vs. G 0.133 (C) 0.283 (C) >1 (-) 29 (-) <0.05
rs3754781 chr2:169015476 STK39 C - 13 A vs. G 0.133 (A) 0.275 (A) >1 (-) 29 (-) <0.05
rs2390642 chr2:169030137 STK39 C - 13 A vs. G - - >1 (-) 30 (-) <0.05
rs16855027 chr2:169027284 STK39 C - 13 A vs. T 0.133 (T) 0.283 (T) <1 (-) 30 (-) <0.05
rs4668025 chr2:169002278 STK39 C - 13 C vs. G 0.15 (C) 0.492 (G) >1 (-) 38 (-) <0.05
rs10497337 chr2:169027149 STK39 C - 13 A vs. G 0.133 (A) 0.283 (A) >1 (-) 30 (-) <0.05
rs12613885 chr2:169032900 STK39 C - 13 T vs. G 0.133 (T) 0.283 (T) >1 (-) 30 (-) <0.05
rs13024274 chr2:169031839 STK39 C - 13 A vs. T 0.117 (A) 0.283 (A) >1 (-) 30 (-) <0.05
rs13033632 chr2:169067176 STK39 C - 13 A vs. C - 0.275 (A) >1 (-) 29 (-) <0.05
rs3769391 chr2:169013688 STK39 C - 13 T vs. G 0.133 (T) 0.283 (T) >1 (-) 30 (-) <0.05
rs11675180 chr2:169076787 STK39 C - 13 T vs. C 0.175 (T) 0.233 (C) >1 (-) 0 (-) <0.05
rs4667555 chr2:168949897 STK39 C - 13 A vs. T 0.417 (T) 0.492 (A) <1 (-) 0 (-) <0.05

Association studies for this region [+]