STK39, chr2:168810530-169104651 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs74271810 chr2:169106699 STK39 [+2048bp] C - 12 C vs. G - 0.058 (C) <1 (-) 0 (-) >0.05
rs77089313 chr2:168924313 STK39 C - 13 T vs. G 0.117 (T) 0.158 (T) <1 (-) 20 (-) >0.05
rs141418152 chr2:169078031 STK39 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs6433022 chr2:168855600 STK39 C - 13 C vs. G 0.117 (G) 0.442 (G) >1 (-) 6 (-) >0.05
rs12478804 chr2:169012380 STK39 C - 13 A vs. G 0.367 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs13023458 chr2:169047798 STK39 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs150883225 chr2:168864335 STK39 C - 3 A vs. G - - <1 (-) 58 (-) >0.05
rs7597286 chr2:168874090 STK39 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs80039116 chr2:168873842 STK39 C - 13 A vs. T 0.017 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs16855092 chr2:169047746 STK39 C - 9 T vs. C - 0.25 (T) <1 (-) 0 (-) >0.05
rs75561378 chr2:169104870 STK39 [+219bp] C - 12 T vs. C 0.008 (T) 0.075 (T) <1 (-) 1 (-) >0.05
rs1982362 chr2:168857164 STK39 C - 13 T vs. C 0.225 (C) 0.392 (C) >1 (-) 0 (-) >0.05
rs3769422 chr2:168872254 STK39 C - 13 A vs. G - 0.258 (A) >1 (-) 0 (-) >0.05
rs3769423 chr2:168872075 STK39 C - 13 A vs. C 0.017 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs3769424 chr2:168871749 STK39 C - 13 A vs. G 0.017 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs7579964 chr2:168826850 STK39 C - 13 T vs. C 0.467 (T) 0.4 (C) >1 (-) 0 (-) >0.05
rs149975435 chr2:168818122 STK39 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs6433028 chr2:168872402 STK39 C - 13 A vs. G 0.017 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs4667996 chr2:168853556 STK39 C - 13 A vs. C 0.475 (A) 0.067 (C) >1 (-) 0 (-) >0.05
rs7582997 chr2:168855717 STK39 C - 13 T vs. G - 0.258 (G) <1 (-) 5 (-) >0.05
rs6433021 chr2:168854906 STK39 C - 13 T vs. C 0.125 (T) 0.3 (C) <1 (-) 6 (-) >0.05
rs1446504 chr2:168834069 STK39 C - 13 A vs. G 0.492 (G) 0.067 (A) <1 (-) 0 (-) >0.05
rs7605670 chr2:168893984 STK39 C - 13 A vs. G 0.017 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs77093316 chr2:168854116 STK39 C - 13 T vs. C 0.008 (T) 0.267 (T) >1 (-) 6 (-) >0.05
rs12465899 chr2:168947814 STK39 C - 12 T vs. G - 0.05 (G) <1 (-) 0 (-) >0.05
rs836652 chr2:168765036 B3GALT1 [+34485bp] C - 6 A vs. G 0.2 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs10497333 chr2:168841469 STK39 C - 12 T vs. C 0.475 (C) 0.067 (T) <1 (-) 0 (-) >0.05
rs145966430 chr2:169024241 STK39 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs35851104 chr2:169026086 STK39 C - 13 T vs. G 0.267 (T) 0.2 (G) >1 (-) 0 (-) >0.05
rs836653 chr2:168765680 B3GALT1 [+35129bp] C - 6 A vs. G 0.192 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs78922175 chr2:169100640 STK39 C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs145093454 chr2:168764963 B3GALT1 [+34412bp] C - 12 T vs. C - - >1 (-) 37 (-) >0.05
rs6721630 chr2:168853091 STK39 C - 13 T vs. C 0.467 (T) 0.367 (C) >1 (-) 0 (-) >0.05
rs77371338 chr2:168877675 STK39 C - 13 A vs. G 0.008 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs116203479 chr2:168853530 STK39 C - 10 T vs. C 0.008 (T) - >1 (-) 3 (-) >0.05
rs1961702 chr2:168831021 STK39 C - 13 A vs. T 0.475 (T) - <1 (-) 0 (-) >0.05
rs6433024 chr2:168856706 STK39 C - 13 T vs. C 0.108 (C) 0.4 (C) >1 (-) 9 (-) >0.05
rs4667997 chr2:168853757 STK39 C - 13 C vs. G 0.467 (C) 0.367 (G) >1 (-) 0 (-) >0.05
rs1947111 chr2:168772574 STK39 [-37956bp] C - 4 T vs. C 0.267 (C) 0.142 (C) <1 (-) 43 (-) >0.05
rs2390624 chr2:168832719 STK39 C - 13 A vs. T 0.467 (A) 0.342 (T) >1 (-) 0 (-) >0.05
rs1448833 chr2:168852821 STK39 C - 13 C vs. G 0.475 (C) 0.058 (G) >1 (-) 0 (-) >0.05
rs72876959 chr2:169071834 STK39 C - 10 A vs. G - - <1 (-) 45 (-) >0.05
rs13424903 chr2:168852476 STK39 C - 13 T vs. C 0.475 (C) 0.067 (T) <1 (-) 0 (-) >0.05
rs13386196 chr2:168996297 STK39 C - 9 T vs. C 0.008 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs7574351 chr2:168875155 STK39 C - 13 A vs. G 0.017 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs13385849 chr2:168995994 STK39 C - 9 T vs. C - 0.25 (T) <1 (-) 0 (-) >0.05
rs16854507 chr2:168854637 STK39 C - 13 A vs. G 0.125 (G) 0.442 (G) >1 (-) 6 (-) >0.05
rs13386296 chr2:168996255 STK39 C - 9 C vs. G 0.008 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs3754786 chr2:168995636 STK39 C - 9 A vs. G - 0.267 (G) >1 (-) 0 (-) >0.05
rs3754785 chr2:168995719 STK39 C - 9 A vs. G - 0.258 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]