STK39, chr2:168810530-169104651 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10184874 chr2:168841190 STK39 C - 13 T vs. C 0.475 (C) 0.067 (T) <1 (-) 0 (-) >0.05
rs6734516 chr2:168837207 STK39 C - 13 A vs. G 0.475 (G) 0.117 (A) <1 (-) 0 (-) >0.05
rs13429853 chr2:168841573 STK39 C - 13 A vs. C 0.475 (A) 0.067 (C) >1 (-) 0 (-) >0.05
rs4667990 chr2:168846009 STK39 C - 13 T vs. G 0.475 (G) 0.067 (T) <1 (-) 0 (-) >0.05
rs1448830 chr2:168845558 STK39 C - 13 A vs. C 0.475 (C) 0.067 (A) <1 (-) 0 (-) >0.05
rs116239781 chr2:169088313 STK39 C - 3 A vs. G 0.058 (G) - >1 (-) 57 (-) >0.05
rs10188180 chr2:168842103 STK39 C - 13 T vs. C 0.475 (C) 0.067 (T) <1 (-) 0 (-) >0.05
rs10199275 chr2:168840089 STK39 C - 13 C vs. G 0.475 (G) 0.1 (C) <1 (-) 0 (-) >0.05
rs4667988 chr2:168840605 STK39 C - 13 A vs. G 0.475 (A) 0.125 (G) >1 (-) 0 (-) >0.05
rs150857085 chr2:169124755 STK39 [+20104bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs66592911 chr2:168834532 STK39 C - 13 T vs. G 0.125 (T) 0.45 (T) <1 (-) 16 (-) >0.05
rs149800455 chr2:168837018 STK39 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs13417858 chr2:168844604 STK39 C - 13 T vs. C 0.483 (C) - <1 (-) 0 (-) >0.05
rs80199186 chr2:168925998 STK39 C - 10 T vs. C - 0.125 (T) <1 (-) 0 (-) >0.05
rs2029074 chr2:168838264 STK39 C - 13 A vs. G 0.475 (G) 0.117 (A) <1 (-) 0 (-) >0.05
rs13432443 chr2:168841611 STK39 C - 13 A vs. G 0.475 (A) 0.05 (G) >1 (-) 0 (-) >0.05
rs3769413 chr2:168989270 STK39 C - 12 T vs. C 0.233 (T) 0.442 (T) >1 (-) 29 (-) >0.05
rs4613238 chr2:169071578 STK39 C - 13 T vs. C 0.308 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs7425023 chr2:169075658 STK39 C - 13 T vs. C 0.308 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs57177742 chr2:168882944 STK39 C - 13 A vs. G 0.017 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs17177084 chr2:168932418 STK39 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs74901086 chr2:168897535 STK39 C - 13 T vs. C 0.017 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs4667991 chr2:168847278 STK39 C - 13 T vs. C 0.483 (C) 0.067 (T) <1 (-) 0 (-) >0.05
rs75190850 chr2:168874179 STK39 C - 13 A vs. G - 0.158 (A) >1 (-) 0 (-) >0.05
rs4667989 chr2:168842510 STK39 C - 13 T vs. C 0.467 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs72887693 chr2:168941994 STK39 C - 5 T vs. C 0.008 (C) - <1 (-) 25 (-) >0.05
rs4667994 chr2:168848588 STK39 C - 13 A vs. G 0.475 (A) 0.067 (G) >1 (-) 0 (-) >0.05
rs74877263 chr2:168821551 STK39 C - 8 T vs. C 0.008 (T) - >1 (-) 30 (-) >0.05
rs61097286 chr2:168826266 STK39 C - 13 T vs. C - 0.267 (C) <1 (-) 15 (-) >0.05
rs59726340 chr2:168827329 STK39 C - 13 T vs. C - - <1 (-) 14 (-) >0.05
rs6710235 chr2:168914079 STK39 C - 13 T vs. C 0.1 (T) 0.117 (T) <1 (-) 22 (-) >0.05
rs12614314 chr2:168883676 STK39 C - 13 T vs. G 0.217 (G) 0.375 (G) >1 (-) 0 (-) >0.05
rs137913637 chr2:168829449 STK39 C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs16854583 chr2:168888556 STK39 C - 13 A vs. C 0.225 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs58056335 chr2:168849832 STK39 C - 13 T vs. G 0.35 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs57290981 chr2:168923638 STK39 C - 13 A vs. G 0.017 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs146536171 chr2:169138949 STK39 [+34298bp] C - 6 A vs. G - - <1 (-) 24 (-) >0.05
rs74844071 chr2:168933900 STK39 C - 13 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs11681460 chr2:168877096 STK39 C - 13 A vs. G 0.233 (G) 0.442 (G) 1 (-) 0 (-) >0.05
rs72887646 chr2:168896604 STK39 C - 13 T vs. C 0.108 (T) - <1 (-) 0 (-) >0.05
rs116321783 chr2:168867172 STK39 C - 8 T vs. C 0.017 (C) - <1 (-) 12 (-) >0.05

Association studies for this region [+]