TAP2, chr6:32789610-32806557 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
Meta_image?name=rs9276627

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141143174 chr6:32787509 TAP2 [-2101bp] C - 7 T vs. C - - >1 (-) 30 (-) >0.05
rs2621420 chr6:32740761 HLA-DQB2 [+9450bp] C - 12 T vs. C 0.408 (T) 0.225 (T) <1 (-) 19 (-) >0.05
rs7760779 chr6:32746464 HLA-DQB2 [+15153bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs115736014 chr6:32799817 TAP2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs9276613 chr6:32743192 HLA-DQB2 [+11881bp] C - 12 C vs. G 0.35 (C) 0.242 (C) <1 (-) 10 (-) >0.05
rs9276614 chr6:32743193 HLA-DQB2 [+11882bp] C - 12 A vs. G 0.367 (A) 0.242 (A) <1 (-) 10 (-) >0.05
rs13203578 chr6:32752540 HLA-DQB2 [+21229bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs13219960 chr6:32752641 HLA-DQB2 [+21330bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs113816721 chr6:32853466 PSMB9 [+26104bp] C - 8 T vs. C - - <1 (-) 3 (-) >0.05
rs114588428 chr6:32833627 PSMB9 [+6265bp] C - 12 T vs. C - - >1 (-) 23 (-) >0.05
rs7383287 chr6:32783086 HLA-DOB C - 12 A vs. G 0.15 (G) 0.075 (G) 1 (-) 8 (-) >0.05

Association studies for this region [+]