TMEM163, chr2:135213330-135476570 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1942041 chr2:135515492 TMEM163 [+38922bp] All: C 108,990 15 C vs. T 0.367 (C) 0.017 (T) 0.88 (0.85-0.91) 0 (0-45) 6.07e-14
Meta_image?name=rs1942041

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs16830733 chr2:135267253 TMEM163 C - 13 T vs. C 0.175 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs584175 chr2:135269464 TMEM163 C - 13 A vs. C 0.175 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs6728926 chr2:135346833 TMEM163 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs13005152 chr2:135197891 MGAT5 C - 13 T vs. G 0.15 (G) 0.458 (G) >1 (-) 10 (-) >0.05
rs3791328 chr2:135204464 MGAT5 C - 12 T vs. C - 0.117 (T) <1 (-) 21 (-) >0.05
rs144784489 chr2:135380684 TMEM163 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs116029562 chr2:135382012 TMEM163 C - 13 A vs. C 0.042 (A) - <1 (-) 7 (-) >0.05
rs574935 chr2:135239297 TMEM163 C - 12 T vs. C 0.142 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs3791310 chr2:135180923 MGAT5 C - 12 A vs. G 0.05 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs115651006 chr2:135206618 MGAT5 C - 13 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs60373617 chr2:135202095 MGAT5 C - 13 T vs. C - 0.192 (T) <1 (-) 0 (-) >0.05
rs564234 chr2:135219254 TMEM163 C - 13 A vs. G 0.133 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs140303495 chr2:135333167 TMEM163 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs2289466 chr2:135180526 MGAT5 C - 13 A vs. G 0.025 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs114609472 chr2:135292303 TMEM163 C - 7 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs140034310 chr2:135517772 TMEM163 [+41202bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs111702273 chr2:135415334 TMEM163 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs10928496 chr2:135266954 TMEM163 C - 13 A vs. T 0.158 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs34942306 chr2:135489844 TMEM163 [+13274bp] C - 12 A vs. G - - >1 (-) 48 (-) >0.05
rs72984257 chr2:135319634 TMEM163 C - 9 A vs. T - - <1 (-) 52 (-) >0.05
rs58731285 chr2:135218327 TMEM163 C - 12 T vs. C - 0.208 (T) <1 (-) 22 (-) >0.05
rs3791306 chr2:135171675 MGAT5 C - 13 T vs. C - 0.292 (T) <1 (-) 9 (-) >0.05
rs139866358 chr2:135166156 MGAT5 C - 5 A vs. G - - <1 (-) 32 (-) >0.05
rs2010917 chr2:135194856 MGAT5 C - 13 T vs. C 0.15 (C) 0.4 (C) >1 (-) 10 (-) >0.05
rs117122538 chr2:135197207 MGAT5 C - 13 T vs. G - 0.192 (T) <1 (-) 0 (-) >0.05
rs3791316 chr2:135183298 MGAT5 C - 13 T vs. C 0.15 (T) 0.458 (T) <1 (-) 13 (-) >0.05
rs13383153 chr2:135509779 TMEM163 [+33209bp] C - 12 A vs. G - - >1 (-) 18 (-) >0.05
chr2:135185375 chr2:135185375 MGAT5 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs4954151 chr2:135264750 TMEM163 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs61551361 chr2:135237689 TMEM163 C - 13 T vs. C 0.15 (C) - >1 (-) 0 (-) >0.05
rs842130 chr2:135262132 TMEM163 C - 13 T vs. C 0.142 (T) 0.283 (T) <1 (-) 0 (-) >0.05
rs6733189 chr2:135222865 TMEM163 C - 13 A vs. G 0.075 (G) 0.467 (A) >1 (-) 3 (-) >0.05
rs61475959 chr2:135185514 MGAT5 C - 13 T vs. C - 0.192 (C) >1 (-) 0 (-) >0.05
rs3791321 chr2:135188248 MGAT5 C - 13 A vs. T - 0.15 (T) <1 (-) 2 (-) >0.05
rs201742966 chr2:135260665 TMEM163 C - 13 A vs. G - - >1 (-) 2 (-) >0.05
rs75302362 chr2:135192097 MGAT5 C - 13 A vs. G - 0.183 (A) <1 (-) 0 (-) >0.05
rs116106483 chr2:135345258 TMEM163 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs11904278 chr2:135219050 TMEM163 C - 13 T vs. C 0.233 (C) 0.375 (C) >1 (-) 0 (-) >0.05
rs139979843 chr2:135206164 MGAT5 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs503755 chr2:135228060 TMEM163 C - 13 T vs. C 0.15 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs144033318 chr2:135204047 MGAT5 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs59778348 chr2:135172338 MGAT5 C - 13 T vs. C 0.075 (T) 0.15 (T) >1 (-) 31 (-) >0.05
rs79001559 chr2:135481971 TMEM163 [+5401bp] C - 9 T vs. C 0.008 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs16830943 chr2:135471415 TMEM163 C - 9 A vs. G - 0.25 (A) <1 (-) 0 (-) >0.05
rs1807374 chr2:135194734 MGAT5 C - 13 T vs. G 0.142 (T) 0.358 (T) <1 (-) 11 (-) >0.05
rs72982258 chr2:135257079 TMEM163 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2230908 chr2:135206340 MGAT5 C - 13 A vs. C 0.017 (A) - >1 (-) 0 (-) >0.05
rs3739033 chr2:135483360 TMEM163 [+6790bp] C - 9 T vs. C - 0.267 (C) >1 (-) 0 (-) >0.05
rs117648522 chr2:135439751 TMEM163 C - 9 T vs. C - 0.008 (T) >1 (-) 0 (-) >0.05
rs11895833 chr2:135293915 TMEM163 C - 11 A vs. C 0.025 (A) 0.183 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]