TMEM163, chr2:135213330-135476570 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1942041 chr2:135515492 TMEM163 [+38922bp] All: C 108,990 15 C vs. T 0.367 (C) 0.017 (T) 0.88 (0.85-0.91) 0 (0-45) 6.07e-14
Meta_image?name=rs1942041

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11898084 chr2:135428054 TMEM163 All: C 108,990 15 T vs. C 0.317 (T) 0.233 (C) 0.92 (0.89-0.95) 0 (0-42) 1.03e-06
rs606076 chr2:135294082 TMEM163 All: C 108,990 15 T vs. C 0.458 (T) 0.183 (T) 1.09 (1.05-1.12) 43 (0-69) 1.04e-06
rs7571113 chr2:135427392 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-43) 1.04e-06
rs4954158 chr2:135426618 TMEM163 All: C 108,990 15 T vs. C 0.333 (T) 0.233 (C) 0.92 (0.89-0.95) 0 (0-43) 1.07e-06
rs655472 chr2:135290221 TMEM163 All: C 108,990 15 T vs. C 0.475 (T) 0.183 (T) 1.09 (1.05-1.12) 42 (0-69) 1.14e-06
rs4954159 chr2:135426782 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-42) 1.22e-06
rs859767 chr2:135341200 TMEM163 All: C 108,990 15 G vs. A 0.308 (G) 0.492 (A) 0.92 (0.89-0.95) 0 (0-42) 1.48e-06
rs9287437 chr2:135357502 TMEM163 All: C 108,990 15 C vs. T 0.308 (C) 0.233 (T) 0.92 (0.89-0.95) 0 (0-42) 1.57e-06
rs578384 chr2:135287914 TMEM163 All: C 108,990 15 T vs. C 0.442 (T) 0.0 (T) 1.08 (1.05-1.12) 51 (11-73) 1.64e-06
rs10928510 chr2:135443940 TMEM163 All: C 108,990 15 G vs. A 0.142 (G) 0.258 (G) 0.90 (0.86-0.94) 37 (0-66) 1.69e-06
rs4954156 chr2:135395863 TMEM163 All: C 108,990 15 T vs. C 0.317 (T) 0.233 (C) 0.92 (0.89-0.95) 0 (0-43) 1.75e-06
rs7602801 chr2:135363870 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.85e-06
rs7570717 chr2:135361035 TMEM163 All: C 108,990 15 G vs. A 0.308 (G) 0.217 (A) 0.92 (0.89-0.95) 0 (0-43) 1.86e-06
rs6750788 chr2:135362981 TMEM163 All: C 108,990 15 A vs. G 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.96e-06
rs10203582 chr2:135362839 TMEM163 All: C 108,990 15 C vs. A 0.317 (C) 0.217 (A) 0.92 (0.89-0.95) 0 (0-42) 1.99e-06
rs6713834 chr2:135459432 TMEM163 All: C 108,990 15 C vs. T - - 1.11 (1.06-1.16) 39 (0-67) 2.15e-06
rs1516991 chr2:135370052 TMEM163 All: C 108,990 15 G vs. A 0.317 (G) 0.225 (A) 0.92 (0.89-0.95) 0 (0-44) 2.21e-06
rs7588102 chr2:135353842 TMEM163 All: C 108,990 15 C vs. T - - 1.09 (1.05-1.12) 0 (0-46) 2.26e-06
rs487404 chr2:135300861 TMEM163 All: C 108,990 15 A vs. G 0.433 (A) 0.2 (A) 1.08 (1.05-1.12) 47 (4-71) 2.28e-06
rs643796 chr2:135300858 TMEM163 All: C 108,990 15 A vs. G 0.433 (A) 0.192 (A) 1.08 (1.05-1.12) 47 (4-71) 2.30e-06
rs2176341 chr2:135371421 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.225 (G) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs4954154 chr2:135370656 TMEM163 All: C 108,990 15 G vs. A 0.325 (G) 0.233 (A) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs613828 chr2:135298713 TMEM163 All: C 108,990 15 G vs. T 0.458 (G) 0.183 (G) 1.08 (1.05-1.12) 48 (5-71) 2.47e-06
rs614356 chr2:135298862 TMEM163 All: C 108,990 15 T vs. C 0.458 (T) 0.183 (T) 1.08 (1.05-1.12) 48 (5-71) 2.48e-06
rs12691871 chr2:135453916 TMEM163 All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 0.90 (0.87-0.94) 39 (0-67) 2.51e-06
rs10803548 chr2:135396738 TMEM163 All: C 108,990 15 C vs. A 0.317 (C) 0.217 (A) 0.92 (0.89-0.96) 0 (0-43) 2.52e-06
rs12691872 chr2:135454032 TMEM163 All: C 108,990 15 C vs. T 0.15 (C) 0.267 (C) 0.90 (0.87-0.94) 39 (0-67) 2.62e-06
rs842357 chr2:135345059 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-42) 2.63e-06
rs11684785 chr2:135393110 TMEM163 All: C 108,990 15 G vs. A 0.317 (G) 0.233 (A) 0.92 (0.89-0.96) 0 (0-45) 2.68e-06
rs4954155 chr2:135383504 TMEM163 All: C 108,990 15 T vs. C 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-44) 2.74e-06
rs6720798 chr2:135457670 TMEM163 All: C 108,990 15 G vs. A 0.15 (G) 0.267 (G) 0.90 (0.87-0.94) 40 (0-67) 2.75e-06
rs1818614 chr2:135356351 TMEM163 All: C 108,990 15 A vs. G 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-46) 2.90e-06
rs6759065 chr2:135389197 TMEM163 All: C 108,990 15 A vs. G 0.317 (A) 0.225 (G) 0.92 (0.89-0.96) 0 (0-44) 2.90e-06
rs4954165 chr2:135458180 TMEM163 All: C 108,990 15 C vs. T 0.158 (C) 0.292 (C) 0.90 (0.87-0.94) 40 (0-67) 2.96e-06
rs10171770 chr2:135485316 TMEM163 [+8746bp] All: C 108,990 15 T vs. C 0.167 (T) 0.283 (T) 0.90 (0.87-0.94) 42 (0-69) 3.04e-06
rs13432068 chr2:135382914 TMEM163 All: C 108,990 15 G vs. A 0.317 (G) 0.217 (A) 0.92 (0.89-0.96) 0 (0-44) 3.05e-06
rs7584925 chr2:135353513 TMEM163 All: C 108,990 15 G vs. A - - 1.08 (1.05-1.12) 0 (0-40) 3.10e-06
rs948583 chr2:135483413 TMEM163 [+6843bp] All: C 108,990 15 A vs. G 0.167 (A) 0.308 (A) 0.90 (0.87-0.94) 41 (0-68) 3.19e-06
rs1818613 chr2:135356285 TMEM163 All: C 108,990 15 T vs. G - - 1.08 (1.05-1.12) 0 (0-43) 3.28e-06
rs2280219 chr2:135351764 TMEM163 All: C 108,990 15 A vs. G 0.3 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-43) 3.28e-06
rs17883869 chr2:135489179 TMEM163 [+12609bp] All: C 108,990 15 G vs. A 0.133 (G) 0.292 (G) 0.90 (0.87-0.94) 43 (0-69) 3.39e-06
rs3886740 chr2:135483960 TMEM163 [+7390bp] All: C 108,990 15 T vs. G 0.167 (T) 0.308 (T) 0.91 (0.87-0.94) 42 (0-69) 3.40e-06
rs11682346 chr2:135388261 TMEM163 All: C 108,990 15 G vs. A 0.317 (G) 0.217 (A) 0.93 (0.90-0.96) 0 (0-43) 3.90e-06
rs12691870 chr2:135453545 TMEM163 All: C 108,990 15 C vs. T 0.15 (C) 0.283 (C) 0.90 (0.87-0.94) 40 (0-67) 3.90e-06
rs6729090 chr2:135401878 TMEM163 All: C 108,990 15 G vs. A 0.317 (G) 0.233 (A) 0.93 (0.90-0.96) 0 (0-43) 3.92e-06
rs4953928 chr2:135481843 TMEM163 [+5273bp] All: C 108,990 15 G vs. A 0.167 (G) 0.292 (G) 0.91 (0.87-0.95) 43 (0-69) 4.08e-06
rs569350 chr2:135293494 TMEM163 All: C 108,990 15 G vs. A - - 0.93 (0.90-0.96) 43 (0-69) 4.21e-06
rs35599954 chr2:135392481 TMEM163 All: C 108,990 15 T vs. C 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-43) 4.24e-06
rs4953926 chr2:135472847 TMEM163 All: C 108,990 15 C vs. T 0.158 (C) 0.292 (C) 0.91 (0.87-0.94) 41 (0-68) 4.39e-06
rs10164986 chr2:135468385 TMEM163 All: C 108,990 15 C vs. T 0.15 (C) 0.292 (C) 0.91 (0.87-0.95) 40 (0-68) 4.65e-06

Association studies for this region [+]