TMEM163, chr2:135213330-135476570 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1942041 chr2:135515492 TMEM163 [+38922bp] All: C 108,990 15 C vs. T 0.367 (C) 0.017 (T) 0.88 (0.85-0.91) 0 (0-45) 6.07e-14
Meta_image?name=rs1942041

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138414158 chr2:135327769 TMEM163 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs17788003 chr2:135272705 TMEM163 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs673260 chr2:135242989 TMEM163 C - 13 A vs. G 0.142 (A) 0.35 (A) <1 (-) 0 (-) >0.05
rs78846319 chr2:135271209 TMEM163 C - 13 A vs. G - 0.15 (A) <1 (-) 0 (-) >0.05
rs474031 chr2:135243175 TMEM163 C - 13 A vs. T 0.142 (A) 0.35 (A) <1 (-) 0 (-) >0.05
rs72980091 chr2:135184944 MGAT5 C - 11 A vs. G - - >1 (-) 1 (-) >0.05
rs72851094 chr2:135217098 TMEM163 C - 13 C vs. G 0.158 (G) - >1 (-) 0 (-) >0.05
rs116737696 chr2:135269020 TMEM163 C - 13 T vs. C - 0.133 (T) <1 (-) 0 (-) >0.05
rs6712534 chr2:135191030 MGAT5 C - 8 T vs. G - 0.075 (G) >1 (-) 0 (-) >0.05
rs74555774 chr2:135271565 TMEM163 C - 7 A vs. C - - <1 (-) 0 (-) >0.05
rs12476549 chr2:135192114 MGAT5 C - 8 T vs. G - 0.058 (G) >1 (-) 0 (-) >0.05
rs55654488 chr2:135226768 TMEM163 C - 13 A vs. G 0.133 (A) - <1 (-) 0 (-) >0.05
rs59112286 chr2:135207301 MGAT5 C - 8 A vs. G - 0.042 (A) <1 (-) 0 (-) >0.05
rs57504074 chr2:135247223 TMEM163 C - 13 T vs. C 0.075 (C) 0.25 (C) >1 (-) 0 (-) >0.05
rs77901367 chr2:135194580 MGAT5 C - 8 T vs. C - 0.05 (T) <1 (-) 0 (-) >0.05
rs16830603 chr2:135181939 MGAT5 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs16830621 chr2:135206614 MGAT5 C - 8 A vs. G - 0.033 (A) <1 (-) 0 (-) >0.05
rs16830602 chr2:135181698 MGAT5 C - 11 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs642339 chr2:135240667 TMEM163 C - 13 T vs. C 0.142 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs12105166 chr2:135216275 TMEM163 C - 13 C vs. G 0.158 (G) - >1 (-) 0 (-) >0.05
rs10189431 chr2:135277383 TMEM163 C - 13 A vs. C 0.125 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs77476668 chr2:135205668 MGAT5 C - 8 T vs. C - 0.042 (T) <1 (-) 0 (-) >0.05
rs494905 chr2:135240324 TMEM163 C - 13 A vs. G 0.142 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs80311431 chr2:135268372 TMEM163 C - 13 A vs. G - 0.15 (A) <1 (-) 0 (-) >0.05
rs7588521 chr2:135178756 MGAT5 C - 13 A vs. G 0.15 (G) 0.458 (G) >1 (-) 9 (-) >0.05
rs72980068 chr2:135173474 MGAT5 C - 13 A vs. G 0.067 (A) - >1 (-) 19 (-) >0.05
rs146849842 chr2:135509944 TMEM163 [+33374bp] C - 8 T vs. C - - <1 (-) 42 (-) >0.05
rs76602360 chr2:135199781 MGAT5 C - 13 A vs. G 0.067 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs140344621 chr2:135234726 TMEM163 C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs77912149 chr2:135295179 TMEM163 C - 5 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs12614292 chr2:135280476 TMEM163 C - 13 A vs. G 0.117 (A) 0.175 (A) >1 (-) 0 (-) >0.05
rs16830706 chr2:135254283 TMEM163 C - 13 T vs. G - 0.125 (T) <1 (-) 0 (-) >0.05
rs148233694 chr2:135333056 TMEM163 C - 9 T vs. C - - >1 (-) 42 (-) >0.05
rs2290483 chr2:135210390 MGAT5 C - 13 A vs. G 0.042 (G) 0.358 (A) >1 (-) 0 (-) >0.05
rs78145896 chr2:135482492 TMEM163 [+5922bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs74860353 chr2:135253269 TMEM163 C - 13 T vs. C - 0.15 (T) <1 (-) 0 (-) >0.05
rs7841 chr2:135211861 MGAT5 C - 13 T vs. C 0.125 (T) - <1 (-) 0 (-) >0.05
rs62170207 chr2:135184380 MGAT5 C - 13 T vs. C 0.075 (T) - >1 (-) 24 (-) >0.05
rs9917190 chr2:135163943 MGAT5 C - 13 T vs. C 0.408 (T) 0.467 (T) <1 (-) 0 (-) >0.05
rs6430516 chr2:135218605 TMEM163 C - 13 A vs. G 0.075 (G) 0.467 (A) >1 (-) 4 (-) >0.05
rs62168961 chr2:135219638 TMEM163 C - 13 A vs. G 0.033 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs144441891 chr2:135344078 TMEM163 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs56892882 chr2:135197670 MGAT5 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs1041938 chr2:135211544 MGAT5 C - 13 A vs. T 0.033 (T) 0.492 (A) <1 (-) 0 (-) >0.05
rs140853725 chr2:135191817 MGAT5 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs72980078 chr2:135176869 MGAT5 C - 13 A vs. G 0.067 (A) - >1 (-) 24 (-) >0.05
rs77624029 chr2:135252047 TMEM163 C - 13 T vs. G - 0.167 (G) >1 (-) 0 (-) >0.05
rs2924943 chr2:135300482 TMEM163 C - 13 A vs. G 0.25 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs140214238 chr2:135181506 MGAT5 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs6730241 chr2:135285736 TMEM163 C - 12 T vs. C - 0.242 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]