TMEM163, chr2:135213330-135476570 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1942041 chr2:135515492 TMEM163 [+38922bp] All: C 108,990 15 C vs. T 0.367 (C) 0.017 (T) 0.88 (0.85-0.91) 0 (0-45) 6.07e-14
Meta_image?name=rs1942041

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs883917 chr2:135437534 TMEM163 All: C 102,085 14 T vs. C 0.15 (T) 0.033 (T) 0.90 (0.86-0.94) 36 (0-66) 4.84e-06
rs2212722 chr2:135484247 TMEM163 [+7677bp] All: C 108,990 15 A vs. C 0.167 (A) 0.3 (A) 0.90 (0.87-0.94) 39 (0-67) 4.91e-06
rs60597813 chr2:135480924 TMEM163 [+4354bp] All: C 108,990 15 C vs. T 0.167 (C) 0.3 (C) 0.91 (0.87-0.95) 42 (0-69) 4.96e-06
rs7565713 chr2:135477639 TMEM163 [+1069bp] All: C 108,990 15 A vs. G 0.167 (A) 0.258 (A) 0.91 (0.87-0.95) 41 (0-68) 5.02e-06
rs13399881 chr2:135484676 TMEM163 [+8106bp] All: C 108,990 15 G vs. A 0.167 (G) 0.308 (G) 0.91 (0.87-0.95) 44 (0-69) 5.15e-06
rs6430528 chr2:135395348 TMEM163 All: C 108,990 15 A vs. G 0.325 (A) 0.217 (G) 0.93 (0.90-0.96) 0 (0-43) 5.65e-06
rs512375 chr2:135285279 TMEM163 All: C 108,990 15 G vs. T 0.442 (G) 0.242 (G) 1.08 (1.04-1.11) 47 (3-71) 5.81e-06
rs4954162 chr2:135438789 TMEM163 All: C 108,990 15 A vs. G 0.142 (A) 0.008 (A) 0.90 (0.86-0.94) 22 (0-58) 6.90e-06
rs4954172 chr2:135522851 TMEM163 [+46281bp] All: C 108,990 15 C vs. T - - 1.11 (1.06-1.16) 28 (0-61) 7.35e-06
rs78877892 chr2:135516504 TMEM163 [+39934bp] All: C 108,990 15 G vs. A 0.142 (G) - 0.90 (0.86-0.95) 27 (0-61) 9.78e-06
rs13033373 chr2:135520534 TMEM163 [+43964bp] All: C 108,990 15 C vs. T 0.142 (C) - 0.90 (0.86-0.95) 27 (0-61) 1.02e-05
rs67451942 chr2:135517106 TMEM163 [+40536bp] All: C 108,990 15 G vs. A 0.142 (G) - 0.91 (0.87-0.95) 40 (0-68) 1.05e-05
rs13424016 chr2:135406395 TMEM163 C - 13 A vs. G 0.4 (A) - <1 (-) 0 (-) <1.00e-04
rs62171377 chr2:135439752 TMEM163 All: C 108,990 15 A vs. G 0.15 (A) - 0.90 (0.87-0.95) 22 (0-58) 1.14e-05
rs16830908 chr2:135438471 TMEM163 All: C 108,990 15 A vs. G 0.15 (A) 0.033 (A) 0.91 (0.87-0.95) 23 (0-58) 1.18e-05
rs842348 chr2:135342391 TMEM163 All: C 108,990 15 G vs. T 0.283 (G) 0.483 (G) 0.93 (0.90-0.96) 0 (0-49) 1.31e-05
rs859766 chr2:135342254 TMEM163 All: C 108,990 15 T vs. C 0.283 (T) 0.483 (T) 0.93 (0.90-0.96) 0 (0-49) 1.35e-05
rs4430991 chr2:135491932 TMEM163 [+15362bp] All: C 108,990 15 T vs. C 0.125 (T) 0.017 (T) 0.91 (0.87-0.95) 28 (0-61) 1.47e-05
rs606101 chr2:135284307 TMEM163 All: C 108,990 15 A vs. G 0.442 (A) 0.0 (A) 1.08 (1.04-1.11) 52 (13-73) 1.47e-05
rs6707326 chr2:135357705 TMEM163 C - 13 A vs. G 0.408 (G) - >1 (-) 0 (-) <1.00e-04
rs842362 chr2:135341120 TMEM163 All: C 108,990 15 A vs. G 0.283 (A) 0.492 (G) 0.93 (0.90-0.96) 0 (0-51) 1.77e-05
rs62171378 chr2:135443955 TMEM163 All: C 108,990 15 G vs. A 0.142 (G) - 0.91 (0.86-0.95) 24 (0-59) 1.98e-05
rs58626212 chr2:135447055 TMEM163 All: C 108,990 15 A vs. G 0.15 (A) 0.275 (A) 0.90 (0.86-0.95) 28 (0-61) 2.16e-05
rs62171394 chr2:135476795 TMEM163 [+225bp] All: C 108,990 15 A vs. G 0.125 (A) - 0.91 (0.87-0.95) 26 (0-60) 2.53e-05
rs34252323 chr2:135486302 TMEM163 [+9732bp] All: C 108,990 15 A vs. G 0.158 (A) 0.283 (A) 0.91 (0.87-0.95) 33 (0-64) 2.87e-05
rs34947476 chr2:135486150 TMEM163 [+9580bp] All: C 108,990 15 G vs. T 0.158 (G) 0.308 (G) 0.91 (0.87-0.95) 34 (0-64) 2.90e-05
rs34405766 chr2:135486189 TMEM163 [+9619bp] All: C 108,990 15 A vs. G 0.158 (A) 0.283 (A) 0.91 (0.87-0.95) 34 (0-64) 2.93e-05
rs71417530 chr2:135448651 TMEM163 All: C 108,990 15 G vs. A 0.15 (G) - 0.91 (0.87-0.95) 26 (0-60) 3.16e-05
rs3739034 chr2:135483381 TMEM163 [+6811bp] All: C 108,990 15 C vs. T 0.158 (C) 0.283 (C) 0.91 (0.87-0.95) 33 (0-64) 3.33e-05
rs35220888 chr2:135479582 TMEM163 [+3012bp] All: C 108,990 15 A vs. G 0.15 (A) 0.017 (A) 0.91 (0.87-0.95) 30 (0-62) 3.48e-05
rs17321713 chr2:135480363 TMEM163 [+3793bp] All: C 108,990 15 T vs. C 0.167 (T) 0.017 (T) 0.91 (0.87-0.95) 30 (0-62) 3.54e-05
rs3886741 chr2:135484101 TMEM163 [+7531bp] All: C 108,990 15 A vs. G 0.15 (A) 0.283 (A) 0.91 (0.87-0.95) 34 (0-64) 3.61e-05
rs842354 chr2:135343934 TMEM163 C - 13 C vs. G 0.392 (G) 0.183 (C) >1 (-) 0 (-) <1.00e-04
rs7592128 chr2:135482870 TMEM163 [+6300bp] All: C 108,990 15 T vs. C 0.167 (T) 0.275 (T) 0.91 (0.87-0.95) 34 (0-64) 3.72e-05
rs4953923 chr2:135445946 TMEM163 All: C 108,990 15 T vs. C 0.142 (T) 0.258 (T) 0.91 (0.87-0.95) 32 (0-63) 4.22e-05
rs34314628 chr2:135455231 TMEM163 All: C 108,990 15 C vs. T - - 1.10 (1.05-1.15) 28 (0-61) 4.61e-05
rs6747587 chr2:135469514 TMEM163 All: C 108,990 15 G vs. A 0.15 (G) 0.258 (G) 0.91 (0.87-0.95) 42 (0-68) 4.62e-05
rs6749329 chr2:135474365 TMEM163 All: C 108,990 15 C vs. T 0.15 (C) 0.267 (C) 0.91 (0.87-0.95) 33 (0-64) 4.71e-05
rs4954168 chr2:135465073 TMEM163 All: C 108,990 15 T vs. C 0.15 (T) 0.267 (T) 0.91 (0.87-0.95) 32 (0-63) 4.75e-05
rs6761929 chr2:135462534 TMEM163 All: C 108,990 15 T vs. C 0.142 (T) 0.25 (T) 0.91 (0.87-0.95) 33 (0-64) 4.78e-05
rs62171396 chr2:135476859 TMEM163 [+289bp] All: C 108,990 15 T vs. C 0.15 (T) 0.267 (T) 0.91 (0.87-0.95) 31 (0-63) 4.88e-05
rs13018063 chr2:135475808 TMEM163 All: C 108,990 15 A vs. G 0.15 (A) 0.267 (A) 0.91 (0.87-0.95) 34 (0-64) 4.95e-05
rs17733977 chr2:135470056 TMEM163 All: C 108,990 15 A vs. G 0.15 (A) 0.017 (A) 0.91 (0.87-0.95) 28 (0-61) 4.95e-05
rs6747870 chr2:135469769 TMEM163 All: C 108,990 15 G vs. A 0.15 (G) 0.017 (G) 0.91 (0.87-0.95) 29 (0-62) 4.95e-05
rs4953925 chr2:135471290 TMEM163 All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 0.91 (0.87-0.95) 32 (0-64) 4.96e-05
rs842352 chr2:135343204 TMEM163 All: C 108,990 15 A vs. C - - 1.10 (1.05-1.15) 15 (0-52) 5.36e-05
rs7564273 chr2:135419794 TMEM163 All: C 108,990 15 C vs. T - - 1.10 (1.05-1.15) 0 (0-0) 7.10e-05
rs16830945 chr2:135471748 TMEM163 All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 0.91 (0.87-0.96) 29 (0-62) 7.73e-05
rs72617009 chr2:135489628 TMEM163 [+13058bp] All: C 108,990 15 A vs. G 0.117 (A) 0.458 (G) 0.90 (0.85-0.95) 0 (0-3) 8.58e-05
rs2212723 chr2:135488584 TMEM163 [+12014bp] C - 13 C vs. G 0.133 (C) 0.292 (C) <1 (-) 42 (-) <0.05

Association studies for this region [+]