TMEM163, chr2:135213330-135476570 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1942041 chr2:135515492 TMEM163 [+38922bp] All: C 108,990 15 C vs. T 0.367 (C) 0.017 (T) 0.88 (0.85-0.91) 0 (0-45) 6.07e-14
Meta_image?name=rs1942041

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs150950392 chr2:135229351 TMEM163 C - 6 A vs. G - - <1 (-) 0 (-) <0.05
rs842356 chr2:135344994 TMEM163 C - 13 A vs. G 0.142 (G) - >1 (-) 27 (-) <0.05
rs71417511 chr2:135221535 TMEM163 C - 13 C vs. G 0.033 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs625519 chr2:135239166 TMEM163 C - 13 A vs. C 0.367 (A) - <1 (-) 0 (-) <0.05
rs59216238 chr2:135306942 TMEM163 C - 12 A vs. T - - >1 (-) 0 (-) <0.05
rs116329916 chr2:135467949 TMEM163 C - 9 T vs. C 0.008 (C) - <1 (-) 0 (-) <0.05
rs113821247 chr2:135307181 TMEM163 C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs35778869 chr2:135220482 TMEM163 C - 13 A vs. G 0.033 (G) 0.075 (G) >1 (-) 0 (-) <0.05
rs72982287 chr2:135276210 TMEM163 C - 13 T vs. C - 0.2 (T) <1 (-) 0 (-) <0.05
rs34581448 chr2:135218193 TMEM163 C - 13 T vs. C 0.033 (T) 0.05 (T) <1 (-) 0 (-) <0.05
rs35815072 chr2:135235583 TMEM163 C - 13 A vs. T 0.033 (A) 0.058 (A) <1 (-) 0 (-) <0.05
rs35375510 chr2:135234858 TMEM163 C - 13 T vs. C 0.033 (T) 0.075 (T) <1 (-) 0 (-) <0.05
rs34637994 chr2:135237639 TMEM163 C - 13 A vs. G 0.033 (G) 0.1 (G) >1 (-) 0 (-) <0.05
rs547177 chr2:135215941 TMEM163 C - 13 A vs. G 0.225 (A) 0.408 (A) <1 (-) 0 (-) <0.05
rs35865359 chr2:135374595 TMEM163 C - 13 T vs. C 0.158 (T) - <1 (-) 25 (-) <0.05
rs144775709 chr2:135408894 TMEM163 C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs16830808 chr2:135325708 TMEM163 C - 12 T vs. G - 0.2 (T) <1 (-) 0 (-) <0.05
rs16830811 chr2:135328854 TMEM163 C - 12 T vs. C - 0.2 (C) >1 (-) 0 (-) <0.05
rs1108035 chr2:135444322 TMEM163 C - 13 A vs. G 0.175 (A) 0.433 (G) <1 (-) 0 (-) <0.05
rs143711639 chr2:135219022 TMEM163 C - 6 T vs. C - - <1 (-) 0 (-) <0.05
rs4954143 chr2:135165605 MGAT5 C - 13 T vs. C 0.492 (T) 0.458 (C) <1 (-) 0 (-) <0.05
rs57459454 chr2:135247971 TMEM163 C - 13 A vs. C 0.033 (A) 0.1 (A) <1 (-) 0 (-) <0.05
rs143828899 chr2:135510035 TMEM163 [+33465bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs143184943 chr2:135294690 TMEM163 C - 11 A vs. G - - >1 (-) 2 (-) <0.05
rs60570360 chr2:135295215 TMEM163 C - 11 C vs. G - - <1 (-) 2 (-) <0.05
rs71417515 chr2:135237147 TMEM163 C - 13 A vs. C - 0.1 (A) <1 (-) 0 (-) <0.05
rs72984217 chr2:135303715 TMEM163 C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs78739338 chr2:135260419 TMEM163 C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) <0.05
rs6730778 chr2:135338640 TMEM163 C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs139537479 chr2:135500833 TMEM163 [+24263bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs145727895 chr2:135324986 TMEM163 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs35187499 chr2:135219879 TMEM163 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs149714949 chr2:135427984 TMEM163 C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs79666865 chr2:135491767 TMEM163 [+15197bp] C - 12 T vs. C - - <1 (-) 7 (-) >0.05
rs141570747 chr2:135313167 TMEM163 C - 9 T vs. C - - >1 (-) 21 (-) >0.05
rs680376 chr2:135262576 TMEM163 C - 13 A vs. C 0.325 (C) 0.458 (A) >1 (-) 0 (-) >0.05
rs58396147 chr2:135304146 TMEM163 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs72984229 chr2:135305828 TMEM163 C - 12 A vs. C 0.017 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs568534 chr2:135262565 TMEM163 C - 13 T vs. C 0.333 (T) 0.458 (C) <1 (-) 0 (-) >0.05
rs6715419 chr2:135329409 TMEM163 C - 12 A vs. G 0.017 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs72984249 chr2:135312312 TMEM163 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs79785917 chr2:135519216 TMEM163 [+42646bp] C - 10 T vs. C - 0.058 (T) >1 (-) 40 (-) >0.05
rs3791324 chr2:135203150 MGAT5 C - 13 A vs. G 0.058 (A) 0.208 (A) <1 (-) 27 (-) >0.05
rs3791325 chr2:135203302 MGAT5 C - 13 A vs. G 0.058 (A) 0.2 (A) <1 (-) 27 (-) >0.05
rs150815814 chr2:135509359 TMEM163 [+32789bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs78940289 chr2:135522331 TMEM163 [+45761bp] C - 12 A vs. G 0.033 (A) - <1 (-) 40 (-) >0.05
rs535900 chr2:135202455 MGAT5 C - 13 A vs. G 0.458 (A) 0.317 (G) >1 (-) 0 (-) >0.05
rs115430077 chr2:135205052 MGAT5 C - 9 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs149231690 chr2:135516247 TMEM163 [+39677bp] C - 10 T vs. C - - <1 (-) 39 (-) >0.05
rs842350 chr2:135342710 TMEM163 C - 13 A vs. T 0.125 (T) - >1 (-) 31 (-) >0.05

Association studies for this region [+]