TMPRSS9, chr19:2389769-2426237 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10405524 chr19:2382770 TMPRSS9 [-6999bp] C - 12 T vs. C 0.342 (T) 0.375 (C) >1 (-) 0 (-) <0.05
rs10405937 chr19:2382900 TMPRSS9 [-6869bp] C - 12 C vs. G 0.342 (G) 0.375 (C) <1 (-) 0 (-) <0.05
rs12976595 chr19:2383541 TMPRSS9 [-6228bp] C - 12 T vs. C 0.35 (C) 0.375 (T) <1 (-) 0 (-) <0.05
rs4807250 chr19:2381268 TMPRSS9 [-8501bp] C - 12 A vs. G 0.367 (G) 0.375 (A) <1 (-) 0 (-) <0.05
rs12982536 chr19:2383564 TMPRSS9 [-6205bp] C - 12 A vs. G 0.35 (A) 0.383 (G) >1 (-) 0 (-) <0.05
rs7245890 chr19:2381994 TMPRSS9 [-7775bp] C - 12 T vs. C - - <1 (-) 0 (-) <0.05
rs116106797 chr19:2439164 LMNB2 C - 6 A vs. G - - >1 (-) 59 (-) <0.05
rs12463037 chr19:2380688 TMPRSS9 [-9081bp] C - 12 T vs. C 0.342 (C) 0.375 (T) <1 (-) 0 (-) <0.05
rs4417647 chr19:2378830 TMPRSS9 [-10939bp] C - 12 A vs. G 0.325 (A) - >1 (-) 0 (-) <0.05
rs10413979 chr19:2383861 TMPRSS9 [-5908bp] C - 12 A vs. C - - <1 (-) 0 (-) <0.05
rs10417197 chr19:2384067 TMPRSS9 [-5702bp] C - 12 A vs. G 0.358 (A) 0.375 (G) >1 (-) 0 (-) <0.05
rs12974906 chr19:2384104 TMPRSS9 [-5665bp] C - 12 A vs. G 0.358 (A) 0.383 (G) >1 (-) 0 (-) <0.05
rs143367040 chr19:2345099 LSM7 [+16480bp] C - 5 A vs. G - - >1 (-) 36 (-) <0.05
rs62120683 chr19:2373547 TMPRSS9 [-16222bp] C - 11 C vs. G - - >1 (-) 0 (-) <0.05
rs10404148 chr19:2382870 TMPRSS9 [-6899bp] C - 12 A vs. G 0.308 (A) 0.4 (G) >1 (-) 0 (-) <0.05
rs2033256 chr19:2382176 TMPRSS9 [-7593bp] C - 11 A vs. T 0.358 (A) 0.375 (T) >1 (-) 0 (-) <0.05
rs6510660 chr19:2372184 TMPRSS9 [-17585bp] C - 12 A vs. G 0.367 (A) 0.358 (G) >1 (-) 0 (-) <0.05
rs8102051 chr19:2370476 TMPRSS9 [-19293bp] C - 12 A vs. C 0.358 (C) 0.375 (A) <1 (-) 0 (-) <0.05
rs10423793 chr19:2381516 TMPRSS9 [-8253bp] C - 12 T vs. C 0.3 (T) 0.383 (C) >1 (-) 0 (-) <0.05
rs72987495 chr19:2366242 TMPRSS9 [-23527bp] C - 11 T vs. G 0.183 (T) 0.267 (T) >1 (-) 45 (-) <0.05
rs12610725 chr19:2343845 LSM7 [+15226bp] C - 11 T vs. C 0.108 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs7507508 chr19:2389261 TMPRSS9 [-508bp] C - 10 T vs. C - - >1 (-) 37 (-) <0.05
rs12610598 chr19:2343630 LSM7 [+15011bp] C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs12982784 chr19:2346882 LSM7 [+18263bp] C - 11 T vs. C 0.458 (T) 0.092 (T) <1 (-) 23 (-) >0.05
rs67841454 chr19:2471167 GADD45B [-4953bp] C - 10 T vs. G 0.5 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs6510661 chr19:2385278 TMPRSS9 [-4491bp] C - 12 A vs. G 0.308 (A) 0.4 (G) >1 (-) 23 (-) >0.05
rs117324377 chr19:2339975 LSM7 [+11356bp] C - 11 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs3783492 chr19:2475289 GADD45B [-831bp] C - 11 A vs. C 0.183 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs6510677 chr19:2473954 GADD45B [-2166bp] C - 11 A vs. C - - <1 (-) 0 (-) >0.05
rs8109305 chr19:2467974 GADD45B [-8146bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs2116961 chr19:2387417 TMPRSS9 [-2352bp] C - 12 T vs. C - - <1 (-) 30 (-) >0.05
rs8100050 chr19:2468954 GADD45B [-7166bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs112838075 chr19:2373511 TMPRSS9 [-16258bp] C - 9 T vs. C - - <1 (-) 15 (-) >0.05
rs76320124 chr19:2373534 TMPRSS9 [-16235bp] C - 10 T vs. C - - <1 (-) 20 (-) >0.05
rs12984135 chr19:2367458 TMPRSS9 [-22311bp] C - 12 A vs. T 0.292 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs2894565 chr19:2389044 TMPRSS9 [-725bp] C - 11 A vs. G 0.308 (G) 0.392 (A) <1 (-) 31 (-) >0.05
rs12462922 chr19:2379586 TMPRSS9 [-10183bp] C - 11 C vs. G 0.058 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs78361343 chr19:2419830 TMPRSS9 C - 9 A vs. T 0.025 (T) - <1 (-) 0 (-) >0.05
rs12608660 chr19:2389566 TMPRSS9 [-203bp] C - 11 A vs. G - - >1 (-) 22 (-) >0.05
rs8101666 chr19:2370491 TMPRSS9 [-19278bp] C - 11 A vs. C 0.1 (A) 0.267 (A) >1 (-) 3 (-) >0.05
rs62120681 chr19:2372188 TMPRSS9 [-17581bp] C - 11 A vs. T 0.033 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs2385175 chr19:2371513 TMPRSS9 [-18256bp] C - 11 T vs. C 0.1 (C) 0.317 (C) <1 (-) 6 (-) >0.05
rs12977539 chr19:2368414 TMPRSS9 [-21355bp] C - 12 A vs. G 0.292 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs7249452 chr19:2369283 TMPRSS9 [-20486bp] C - 12 C vs. G 0.283 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs4806842 chr19:2378852 TMPRSS9 [-10917bp] C - 11 A vs. G 0.1 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs4807274 chr19:2467423 GADD45B [-8697bp] C - 11 T vs. C 0.217 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs2396234 chr19:2389111 TMPRSS9 [-658bp] C - 11 T vs. C - - >1 (-) 32 (-) >0.05
rs1865123 chr19:2376583 TMPRSS9 [-13186bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs4806850 chr19:2447322 LMNB2 C - 7 C vs. G 0.142 (C) - >1 (-) 0 (-) >0.05
rs72971464 chr19:2402116 TMPRSS9 All: C 96,015 12 T vs. C 0.033 (T) - 0.93 (0.86-1.02) 12 (0-52) 0.126

Association studies for this region [+]