TMPRSS9, chr19:2389769-2426237 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79051964 chr19:2437816 LMNB2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs1865122 chr19:2376674 TMPRSS9 [-13095bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2891697 chr19:2371245 TMPRSS9 [-18524bp] C - 11 A vs. G 0.1 (A) 0.342 (A) >1 (-) 4 (-) >0.05
rs66470457 chr19:2370774 TMPRSS9 [-18995bp] C - 11 A vs. T 0.083 (A) 0.342 (A) >1 (-) 11 (-) >0.05
rs1978726 chr19:2375953 TMPRSS9 [-13816bp] C - 11 T vs. C 0.092 (C) 0.333 (C) <1 (-) 4 (-) >0.05
rs62120682 chr19:2373322 TMPRSS9 [-16447bp] C - 11 A vs. G - - >1 (-) 20 (-) >0.05
rs2894566 chr19:2389593 TMPRSS9 [-176bp] C - 10 T vs. C 0.358 (C) 0.392 (T) <1 (-) 26 (-) >0.05
rs147405167 chr19:2433751 LMNB2 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs2385177 chr19:2371580 TMPRSS9 [-18189bp] C - 11 T vs. C 0.1 (T) 0.342 (T) >1 (-) 8 (-) >0.05
rs4134441 chr19:2371649 TMPRSS9 [-18120bp] C - 11 C vs. G 0.1 (G) - <1 (-) 5 (-) >0.05
rs12610988 chr19:2392231 TMPRSS9 C - 12 T vs. G 0.342 (T) 0.367 (G) >1 (-) 43 (-) >0.05
rs148229383 chr19:2436110 LMNB2 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs11881070 chr19:2389140 TMPRSS9 [-629bp] C - 11 T vs. C - - >1 (-) 26 (-) >0.05
rs12609455 chr19:2463681 LMNB2 [+6687bp] C - 4 T vs. C 0.008 (T) 0.283 (T) >1 (-) 34 (-) >0.05
rs9676415 chr19:2391776 TMPRSS9 C - 12 C vs. G 0.35 (C) 0.367 (G) >1 (-) 43 (-) >0.05
rs1978143 chr19:2372921 TMPRSS9 [-16848bp] C - 11 C vs. G 0.1 (C) 0.342 (C) >1 (-) 7 (-) >0.05
rs9676371 chr19:2391651 TMPRSS9 C - 12 A vs. G 0.35 (G) 0.367 (A) <1 (-) 43 (-) >0.05
rs4807244 chr19:2372238 TMPRSS9 [-17531bp] C - 11 A vs. G 0.1 (A) 0.342 (A) >1 (-) 7 (-) >0.05
rs4807243 chr19:2372213 TMPRSS9 [-17556bp] C - 11 T vs. C 0.1 (C) 0.342 (C) <1 (-) 7 (-) >0.05
rs4503922 chr19:2371613 TMPRSS9 [-18156bp] C - 11 T vs. C - - <1 (-) 7 (-) >0.05
rs4806840 chr19:2372678 TMPRSS9 [-17091bp] C - 11 T vs. C 0.1 (C) 0.342 (C) <1 (-) 6 (-) >0.05
rs9676624 chr19:2391722 TMPRSS9 C - 12 T vs. G 0.342 (T) 0.367 (G) >1 (-) 43 (-) >0.05
rs10419394 chr19:2392263 TMPRSS9 C - 12 T vs. C 0.342 (T) 0.367 (C) >1 (-) 43 (-) >0.05
rs59218978 chr19:2393744 TMPRSS9 C - 12 A vs. T 0.35 (A) 0.358 (T) >1 (-) 45 (-) >0.05
rs8101012 chr19:2370605 TMPRSS9 [-19164bp] C - 11 T vs. G - - >1 (-) 9 (-) >0.05
rs8101533 chr19:2370355 TMPRSS9 [-19414bp] C - 11 T vs. C - - >1 (-) 9 (-) >0.05
rs75587362 chr19:2373276 TMPRSS9 [-16493bp] C - 11 T vs. C - - >1 (-) 8 (-) >0.05
rs113462747 chr19:2390354 TMPRSS9 C - 10 T vs. C 0.4 (T) 0.375 (C) >1 (-) 19 (-) >0.05
rs7251760 chr19:2387228 TMPRSS9 [-2541bp] C - 11 T vs. C - - >1 (-) 2 (-) >0.05
rs12232833 chr19:2394064 TMPRSS9 C - 12 C vs. G 0.35 (G) 0.367 (C) <1 (-) 45 (-) >0.05
rs10408879 chr19:2395143 TMPRSS9 C - 12 T vs. C 0.333 (C) 0.342 (T) <1 (-) 45 (-) >0.05
rs1128392 chr19:2344022 LSM7 [+15403bp] C - 5 A vs. G 0.075 (A) - >1 (-) 47 (-) >0.05
rs12982381 chr19:2469404 GADD45B [-6716bp] C - 11 T vs. C 0.158 (T) 0.242 (T) <1 (-) 0 (-) >0.05
rs61042706 chr19:2393783 TMPRSS9 C - 12 C vs. G - - >1 (-) 46 (-) >0.05
rs75183089 chr19:2346990 LSM7 [+18371bp] C - 5 A vs. C 0.042 (C) 0.158 (C) <1 (-) 14 (-) >0.05
rs148188432 chr19:2452021 LMNB2 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs10414747 chr19:2392608 TMPRSS9 C - 12 A vs. G 0.342 (A) 0.367 (G) >1 (-) 45 (-) >0.05
rs12610194 chr19:2391075 TMPRSS9 C - 11 A vs. C 0.492 (A) 0.317 (C) >1 (-) 31 (-) >0.05
rs7409191 chr19:2390591 TMPRSS9 C - 12 T vs. C - - >1 (-) 39 (-) >0.05
rs34979650 chr19:2395196 TMPRSS9 C - 12 A vs. T - - >1 (-) 43 (-) >0.05
rs10411938 chr19:2392443 TMPRSS9 C - 12 A vs. G 0.342 (G) 0.383 (A) <1 (-) 45 (-) >0.05
rs10413548 chr19:2392452 TMPRSS9 C - 12 T vs. C 0.358 (C) 0.375 (T) <1 (-) 45 (-) >0.05
rs34879276 chr19:2369997 TMPRSS9 [-19772bp] C - 12 A vs. G - 0.292 (A) >1 (-) 0 (-) >0.05
rs12975085 chr19:2368582 TMPRSS9 [-21187bp] C - 12 C vs. G 0.258 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs67845727 chr19:2369674 TMPRSS9 [-20095bp] C - 12 C vs. G 0.258 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs17763599 chr19:2369415 TMPRSS9 [-20354bp] C - 12 T vs. G 0.258 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs2396235 chr19:2389604 TMPRSS9 [-165bp] C - 10 C vs. G 0.317 (C) 0.4 (G) >1 (-) 20 (-) >0.05
rs118004394 chr19:2458346 LMNB2 [+1352bp] C - 11 A vs. C 0.017 (C) - >1 (-) 25 (-) >0.05
rs2082000 chr19:2392985 TMPRSS9 C - 12 T vs. C - - <1 (-) 44 (-) >0.05
rs2396236 chr19:2389612 TMPRSS9 [-157bp] C - 10 T vs. C - - >1 (-) 20 (-) >0.05

Association studies for this region [+]