TMPRSS9, chr19:2389769-2426237 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56392124 chr19:2463554 LMNB2 [+6560bp] C - 9 C vs. G 0.025 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs75833880 chr19:2353347 LSM7 [+24728bp] C - 8 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs148510092 chr19:2366771 TMPRSS9 [-22998bp] C - 12 T vs. C - - >1 (-) 5 (-) >0.05
rs62120707 chr19:2398224 TMPRSS9 C - 12 A vs. G - - <1 (-) 39 (-) >0.05
rs75250151 chr19:2396383 TMPRSS9 C - 12 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs12462821 chr19:2352077 LSM7 [+23458bp] C - 12 T vs. C 0.042 (T) 0.0 (T) >1 (-) 8 (-) >0.05
rs75373605 chr19:2376005 TMPRSS9 [-13764bp] C - 4 T vs. G - - <1 (-) 0 (-) >0.05
rs10424233 chr19:2353736 LSM7 [+25117bp] C - 12 A vs. G 0.042 (A) 0.008 (A) >1 (-) 8 (-) >0.05
rs3210 chr19:2341674 LSM7 [+13055bp] C - 10 C vs. G 0.167 (C) - >1 (-) 31 (-) >0.05
rs140152353 chr19:2379463 TMPRSS9 [-10306bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs8113543 chr19:2467961 GADD45B [-8159bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs149645561 chr19:2380506 TMPRSS9 [-9263bp] C - 11 C vs. G - - >1 (-) 2 (-) >0.05
rs116770326 chr19:2343010 LSM7 [+14391bp] C - 10 A vs. T 0.15 (A) - >1 (-) 31 (-) >0.05
rs145574677 chr19:2377263 TMPRSS9 [-12506bp] C - 11 A vs. G - - >1 (-) 3 (-) >0.05
rs28475301 chr19:2355357 LSM7 [+26738bp] C - 12 T vs. C 0.05 (T) 0.0 (T) >1 (-) 7 (-) >0.05
rs8106153 chr19:2343844 LSM7 [+15225bp] C - 12 A vs. G 0.033 (A) 0.0 (A) >1 (-) 7 (-) >0.05
rs62119883 chr19:2468152 GADD45B [-7968bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs7246088 chr19:2341209 LSM7 [+12590bp] C - 10 T vs. C 0.158 (C) - <1 (-) 31 (-) >0.05
rs4806846 chr19:2410484 TMPRSS9 C - 11 A vs. G 0.083 (A) 0.217 (A) <1 (-) 28 (-) >0.05
rs147148402 chr19:2380422 TMPRSS9 [-9347bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs1609752 chr19:2339958 LSM7 [+11339bp] C - 12 T vs. C 0.05 (T) 0.017 (T) >1 (-) 8 (-) >0.05
rs7245824 chr19:2341060 LSM7 [+12441bp] C - 12 T vs. C 0.05 (T) 0.0 (T) >1 (-) 8 (-) >0.05
rs1609754 chr19:2340736 LSM7 [+12117bp] C - 12 T vs. C 0.008 (T) 0.042 (T) >1 (-) 8 (-) >0.05
rs77336580 chr19:2359172 LSM7 [+30553bp] C - 10 T vs. C 0.15 (T) - >1 (-) 35 (-) >0.05
rs78266449 chr19:2437998 LMNB2 C - 12 T vs. C 0.042 (T) 0.408 (T) >1 (-) 9 (-) >0.05
rs76434007 chr19:2341488 LSM7 [+12869bp] C - 10 A vs. T 0.15 (A) - >1 (-) 33 (-) >0.05
rs62120687 chr19:2390520 TMPRSS9 C - 11 T vs. C - - >1 (-) 32 (-) >0.05
rs17852546 chr19:2344034 LSM7 [+15415bp] C - 10 A vs. C 0.158 (A) - >1 (-) 27 (-) >0.05
rs62122268 chr19:2427125 TIMM13 C - 12 T vs. C 0.217 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs79980491 chr19:2343498 LSM7 [+14879bp] C - 10 A vs. G 0.158 (A) - >1 (-) 29 (-) >0.05
rs55690659 chr19:2345820 LSM7 [+17201bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs77670399 chr19:2377985 TMPRSS9 [-11784bp] C - 11 A vs. G - 0.025 (G) <1 (-) 2 (-) >0.05
rs75433706 chr19:2379946 TMPRSS9 [-9823bp] C - 11 T vs. C 0.042 (C) 0.042 (C) <1 (-) 2 (-) >0.05
rs55792148 chr19:2463753 LMNB2 [+6759bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs73919616 chr19:2371065 TMPRSS9 [-18704bp] C - 11 T vs. C 0.008 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs2385176 chr19:2371516 TMPRSS9 [-18253bp] C - 11 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs75679340 chr19:2380212 TMPRSS9 [-9557bp] C - 11 A vs. T 0.042 (T) - <1 (-) 1 (-) >0.05
rs76697325 chr19:2380107 TMPRSS9 [-9662bp] C - 11 A vs. C 0.033 (A) 0.042 (A) >1 (-) 1 (-) >0.05
rs117206319 chr19:2378725 TMPRSS9 [-11044bp] C - 11 T vs. C 0.042 (T) 0.017 (T) >1 (-) 3 (-) >0.05
rs117518734 chr19:2451776 LMNB2 C - 11 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs75024020 chr19:2379847 TMPRSS9 [-9922bp] C - 11 T vs. C - 0.042 (C) <1 (-) 1 (-) >0.05
rs10403226 chr19:2468050 GADD45B [-8070bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs75504785 chr19:2346378 LSM7 [+17759bp] C - 10 T vs. C 0.158 (T) - >1 (-) 28 (-) >0.05
rs117916448 chr19:2368737 TMPRSS9 [-21032bp] C - 12 C vs. G 0.042 (C) - >1 (-) 2 (-) >0.05
rs7343092 chr19:2459093 LMNB2 [+2099bp] C - 11 A vs. G 0.1 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs112620940 chr19:2378105 TMPRSS9 [-11664bp] C - 11 T vs. C - - <1 (-) 3 (-) >0.05
rs72971463 chr19:2400202 TMPRSS9 All: C 99,286 13 G vs. A 0.067 (G) 0.017 (G) 0.97 (0.89-1.05) 0 (0-49) 0.400
rs112442657 chr19:2453162 LMNB2 C - 8 T vs. C 0.058 (C) - <1 (-) 0 (-) >0.05
rs75500878 chr19:2466839 GADD45B [-9281bp] C - 7 A vs. G 0.033 (G) - <1 (-) 30 (-) >0.05
rs72989465 chr19:2384293 TMPRSS9 [-5476bp] C - 11 T vs. C 0.042 (T) 0.05 (T) >1 (-) 2 (-) >0.05

Association studies for this region [+]