TUBG2, chr17:40811323-40819024 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62078394 chr17:40772967 TUBG1 [+5715bp] All: C 108,990 15 A vs. C 0.25 (A) - 1.09 (1.05-1.13) 41 (0-68) 2.72e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62078394 chr17:40772967 TUBG1 [+5715bp] All: C 108,990 15 A vs. C 0.25 (A) - 1.09 (1.05-1.13) 41 (0-68) 2.72e-06
rs12952407 chr17:40791178 TUBG2 [-20145bp] All: C 108,990 15 T vs. C 0.233 (T) 0.033 (T) 1.09 (1.05-1.13) 40 (0-67) 2.91e-06
rs11654144 chr17:40782389 TUBG1 [+15137bp] All: C 108,990 15 C vs. T - - 0.90 (0.86-0.94) 21 (0-57) 3.41e-06
rs11654121 chr17:40797461 TUBG2 [-13862bp] All: C 108,990 15 C vs. T 0.233 (C) - 1.09 (1.05-1.13) 38 (0-66) 3.57e-06
rs2090415 chr17:40793335 TUBG2 [-17988bp] All: C 108,990 15 C vs. A - - 0.92 (0.88-0.95) 38 (0-67) 3.58e-06
rs9897504 chr17:40816767 TUBG2 All: C 108,990 15 T vs. C 0.242 (T) - 1.10 (1.05-1.14) 33 (0-64) 4.08e-06
rs11653864 chr17:40782320 TUBG1 [+15068bp] All: C 108,990 15 G vs. T - - 0.92 (0.89-0.95) 39 (0-67) 4.20e-06
rs6503715 chr17:40788744 TUBG1 [+21492bp] All: C 108,990 15 C vs. T - - 0.92 (0.89-0.95) 40 (0-67) 5.42e-06
rs62078395 chr17:40789841 TUBG2 [-21482bp] All: C 108,990 15 G vs. A - - 0.92 (0.89-0.95) 40 (0-67) 5.44e-06
rs2292749 chr17:40818584 TUBG2 All: C 108,990 15 T vs. C 0.333 (T) 0.383 (T) 0.93 (0.89-0.96) 7 (0-57) 7.97e-05
rs12601457 chr17:40780847 TUBG1 [+13595bp] All: C 108,990 15 C vs. T - 0.392 (T) 1.08 (1.04-1.12) 1 (0-54) 7.98e-05
rs35635959 chr17:40772288 TUBG1 [+5036bp] All: C 108,990 15 C vs. T 0.325 (C) 0.4 (C) 0.93 (0.90-0.96) 0 (0-52) 8.04e-05
rs74322397 chr17:40768629 TUBG1 [+1377bp] All: C 108,990 15 C vs. T - - 1.07 (1.04-1.11) 0 (0-53) 9.02e-05
rs34138141 chr17:40781561 TUBG1 [+14309bp] All: C 108,990 15 T vs. G 0.325 (T) 0.2 (T) 0.93 (0.90-0.96) 0 (0-53) 9.03e-05
rs35733365 chr17:40809784 TUBG2 [-1539bp] All: C 108,990 15 C vs. T 0.333 (C) 0.392 (C) 0.93 (0.90-0.97) 0 (0-52) 1.79e-04
rs78630052 chr17:40841070 CNTNAP1 C - 7 T vs. C 0.083 (T) - <1 (-) 40 (-) <0.05
rs12938909 chr17:40787764 TUBG1 [+20512bp] C - 13 C vs. G 0.3 (G) 0.392 (G) >1 (-) 9 (-) <0.05
rs34779241 chr17:40824834 PLEKHH3 C - 13 A vs. G 0.333 (G) 0.217 (G) >1 (-) 14 (-) <0.05
rs12936169 chr17:40824823 PLEKHH3 C - 13 A vs. G 0.333 (A) 0.175 (A) <1 (-) 14 (-) <0.05
rs117787934 chr17:40769659 TUBG1 [+2407bp] C - 6 T vs. C 0.017 (T) - <1 (-) 0 (-) <0.05
rs66918837 chr17:40799633 TUBG2 [-11690bp] C - 13 A vs. G 0.333 (A) 0.4 (A) <1 (-) 12 (-) <0.05
rs71377289 chr17:40812065 TUBG2 C - 13 A vs. G - - <1 (-) 1 (-) <0.05
rs146246705 chr17:40776904 TUBG1 [+9652bp] C - 10 C vs. G - - <1 (-) 38 (-) <0.05
rs112308196 chr17:40863181 EZH1 C - 10 T vs. C - - <1 (-) 48 (-) <0.05
rs73983742 chr17:40823935 PLEKHH3 C - 4 A vs. T - - >1 (-) 33 (-) >0.05
chr17:40773343 chr17:40773343 TUBG1 [+6091bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs2277618 chr17:40822678 PLEKHH3 C - 12 T vs. C 0.125 (T) 0.408 (C) <1 (-) 32 (-) >0.05
rs149402495 chr17:40804715 TUBG2 [-6608bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs2134808 chr17:40782083 TUBG1 [+14831bp] C - 13 T vs. G 0.217 (G) - <1 (-) 22 (-) >0.05
rs142411385 chr17:40802286 TUBG2 [-9037bp] C - 6 A vs. G - - >1 (-) 19 (-) >0.05
rs72628307 chr17:40799560 TUBG2 [-11763bp] C - 12 T vs. C 0.083 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs75524028 chr17:40810228 TUBG2 [-1095bp] C - 12 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs2242461 chr17:40861424 EZH1 C - 13 A vs. G 0.375 (G) 0.442 (A) >1 (-) 5 (-) >0.05
rs1542923 chr17:40863761 EZH1 C - 13 A vs. G - - >1 (-) 6 (-) >0.05
rs1542924 chr17:40863692 EZH1 C - 13 C vs. G 0.375 (C) 0.458 (G) <1 (-) 5 (-) >0.05
rs148215732 chr17:40855261 EZH1 C - 12 T vs. C - - <1 (-) 41 (-) >0.05
rs526779 chr17:40811997 TUBG2 C - 13 T vs. G 0.442 (G) 0.358 (T) >1 (-) 0 (-) >0.05
rs12942278 chr17:40772870 TUBG1 [+5618bp] C - 13 A vs. G 0.433 (G) 0.425 (A) >1 (-) 0 (-) >0.05
rs111733143 chr17:40788047 TUBG1 [+20795bp] C - 10 A vs. C - - <1 (-) 17 (-) >0.05
rs1554227 chr17:40818451 TUBG2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
chr17:40829601 chr17:40829601 PLEKHH3 [+553bp] C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs7225109 chr17:40807170 TUBG2 [-4153bp] C - 13 A vs. G 0.425 (A) 0.417 (G) <1 (-) 0 (-) >0.05
rs3760386 chr17:40842084 CNTNAP1 C - 13 A vs. G 0.458 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs3760385 chr17:40841906 CNTNAP1 C - 13 A vs. G - - <1 (-) 9 (-) >0.05
rs7214055 chr17:40853171 EZH1 C - 5 C vs. G - 0.033 (C) >1 (-) 30 (-) >0.05
rs1553468 chr17:40849842 CNTNAP1 C - 13 A vs. G 0.417 (A) 0.475 (G) <1 (-) 0 (-) >0.05
rs11649877 chr17:40772397 TUBG1 [+5145bp] C - 13 A vs. G 0.425 (A) 0.425 (G) <1 (-) 0 (-) >0.05
rs144603251 chr17:40849405 CNTNAP1 C - 10 A vs. G - - <1 (-) 13 (-) >0.05
rs1024091 chr17:40771994 TUBG1 [+4742bp] C - 13 T vs. C 0.425 (C) 0.417 (T) >1 (-) 0 (-) >0.05
rs9911799 chr17:40767688 TUBG1 [+436bp] C - 13 T vs. C 0.425 (C) 0.425 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]