VAMP4, chr1:171669300-171711387 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10913565 chr1:171706706 VAMP4 All: C 108,990 15 G vs. A 0.133 (G) 0.142 (G) 0.91 (0.88-0.95) 0 (0-50) 5.35e-06
Meta_image?name=rs10913565

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10913565 chr1:171706706 VAMP4 All: C 108,990 15 G vs. A 0.133 (G) 0.142 (G) 0.91 (0.88-0.95) 0 (0-50) 5.35e-06
rs6678890 chr1:171694566 VAMP4 All: C 108,990 15 A vs. C 0.133 (A) 0.142 (A) 0.91 (0.88-0.95) 0 (0-53) 5.38e-06
rs55670848 chr1:171697497 VAMP4 All: C 108,990 15 T vs. C 0.133 (T) 0.167 (T) 0.91 (0.88-0.95) 0 (0-52) 5.71e-06
rs11808099 chr1:171688790 VAMP4 All: C 108,990 15 C vs. A 0.142 (C) 0.167 (C) 0.91 (0.88-0.95) 1 (0-54) 5.80e-06
rs78213404 chr1:171685491 VAMP4 All: C 108,990 15 T vs. C 0.133 (T) 0.15 (T) 0.91 (0.88-0.95) 1 (0-54) 6.45e-06
rs2298914 chr1:171710405 VAMP4 All: C 108,990 15 T vs. C 0.133 (T) 0.175 (T) 0.91 (0.88-0.95) 0 (0-51) 6.48e-06
rs12119232 chr1:171711152 VAMP4 All: C 108,990 15 C vs. A 0.142 (C) 0.167 (C) 0.91 (0.88-0.95) 0 (0-52) 6.53e-06
rs1001373 chr1:171684506 VAMP4 All: C 108,990 15 A vs. G 0.133 (A) 0.167 (A) 0.91 (0.88-0.95) 1 (0-54) 6.91e-06
rs11583920 chr1:171683611 VAMP4 All: C 108,990 15 G vs. A 0.133 (G) 0.142 (G) 0.91 (0.88-0.95) 1 (0-54) 7.00e-06
rs10913529 chr1:171679465 VAMP4 All: C 108,990 15 C vs. A 0.133 (C) 0.167 (C) 0.91 (0.88-0.95) 2 (0-55) 7.16e-06
rs12128536 chr1:171674607 VAMP4 All: C 108,990 15 C vs. T 0.133 (C) 0.158 (C) 0.91 (0.88-0.95) 3 (0-55) 7.67e-06
rs15655 chr1:171673272 VAMP4 All: C 108,990 15 A vs. C 0.133 (A) 0.133 (A) 0.91 (0.88-0.95) 3 (0-55) 8.49e-06
rs10903 chr1:171673236 VAMP4 All: C 108,990 15 A vs. G 0.133 (A) 0.158 (A) 0.91 (0.88-0.95) 3 (0-55) 8.58e-06
rs6679354 chr1:171668002 VAMP4 [-1298bp] All: C 108,990 15 C vs. T 0.133 (C) - 0.91 (0.87-0.95) 1 (0-54) 8.71e-06
rs1052676 chr1:171673054 VAMP4 All: C 108,990 15 C vs. T 0.133 (C) 0.133 (C) 0.91 (0.88-0.95) 4 (0-55) 8.73e-06
rs112293138 chr1:171714002 VAMP4 [+2615bp] All: C 108,990 15 G vs. T 0.133 (G) 0.2 (G) 0.91 (0.88-0.95) 0 (0-51) 9.07e-06
rs17649068 chr1:171713893 VAMP4 [+2506bp] All: C 108,990 15 T vs. C 0.133 (T) 0.2 (T) 0.91 (0.88-0.95) 0 (0-51) 9.30e-06
rs11803174 chr1:171674338 VAMP4 All: C 108,990 15 T vs. C 0.133 (T) 0.167 (T) 0.91 (0.87-0.95) 5 (0-56) 9.40e-06
rs10913582 chr1:171715585 VAMP4 [+4198bp] All: C 108,990 15 A vs. G 0.133 (A) 0.2 (A) 0.91 (0.88-0.95) 0 (0-50) 9.51e-06
rs10913511 chr1:171668951 VAMP4 [-349bp] All: C 108,990 15 A vs. G 0.133 (A) 0.158 (A) 0.91 (0.88-0.95) 2 (0-55) 9.65e-06
rs11801846 chr1:171674241 VAMP4 All: C 108,990 15 T vs. G 0.133 (T) 0.167 (T) 0.91 (0.87-0.95) 5 (0-56) 9.67e-06
rs11590680 chr1:171716574 VAMP4 [+5187bp] All: C 108,990 15 A vs. G 0.133 (A) 0.2 (A) 0.91 (0.88-0.95) 0 (0-49) 9.95e-06
rs10913609 chr1:171722152 VAMP4 [+10765bp] All: C 108,990 15 A vs. G - - 1.10 (1.05-1.14) 0 (0-49) 1.00e-05
rs10489251 chr1:171717534 VAMP4 [+6147bp] All: C 108,990 15 C vs. A 0.133 (C) 0.192 (C) 0.91 (0.88-0.95) 0 (0-49) 1.01e-05
rs11580522 chr1:171720978 VAMP4 [+9591bp] All: C 108,990 15 C vs. T 0.133 (C) 0.2 (C) 0.91 (0.88-0.95) 0 (0-48) 1.01e-05
rs11577073 chr1:171716724 VAMP4 [+5337bp] All: C 108,990 15 T vs. C 0.133 (T) 0.192 (T) 0.91 (0.88-0.95) 0 (0-49) 1.04e-05
rs11577197 chr1:171719798 VAMP4 [+8411bp] All: C 108,990 15 T vs. G 0.117 (T) 0.208 (T) 0.91 (0.88-0.95) 0 (0-49) 1.04e-05
rs11578699 chr1:171719769 VAMP4 [+8382bp] All: C 108,990 15 T vs. C 0.133 (T) - 0.91 (0.88-0.95) 0 (0-49) 1.04e-05
rs11578723 chr1:171719954 VAMP4 [+8567bp] All: C 108,990 15 C vs. T - - 1.10 (1.05-1.14) 0 (0-49) 1.04e-05
rs12127026 chr1:171668813 VAMP4 [-487bp] All: C 108,990 15 G vs. A 0.1 (G) 0.167 (G) 0.91 (0.88-0.95) 2 (0-55) 1.04e-05
rs11580415 chr1:171666832 VAMP4 [-2468bp] All: C 108,990 15 G vs. A 0.133 (G) 0.133 (G) 0.91 (0.88-0.95) 3 (0-55) 1.07e-05
rs11578179 chr1:171667160 VAMP4 [-2140bp] All: C 108,990 15 G vs. A - - 1.10 (1.05-1.14) 3 (0-55) 1.10e-05
rs78075821 chr1:171724645 VAMP4 [+13258bp] All: C 108,990 15 A vs. C 0.133 (A) 0.175 (A) 0.91 (0.88-0.95) 0 (0-50) 1.20e-05
rs10913587 chr1:171717417 VAMP4 [+6030bp] All: C 108,990 15 C vs. T - - 1.10 (1.05-1.14) 0 (0-47) 1.24e-05
rs74530574 chr1:171714200 VAMP4 [+2813bp] All: C 108,990 15 A vs. G 0.125 (A) 0.183 (A) 0.91 (0.88-0.95) 0 (0-51) 1.28e-05
rs2421911 chr1:171728983 VAMP4 [+17596bp] All: C 108,990 15 G vs. A - - 1.09 (1.05-1.14) 0 (0-52) 1.48e-05
rs142821193 chr1:171663510 VAMP4 [-5790bp] All: C 108,990 15 T vs. C - - 1.10 (1.05-1.14) 41 (0-68) 1.53e-05
rs11579698 chr1:171666922 VAMP4 [-2378bp] All: C 108,990 15 T vs. C 0.133 (T) 0.133 (T) 0.91 (0.88-0.95) 0 (0-53) 1.94e-05
rs113462425 chr1:171663674 VAMP4 [-5626bp] All: C 108,990 15 A vs. G - - 1.10 (1.05-1.15) 6 (0-57) 1.95e-05
rs9662853 chr1:171652731 VAMP4 [-16569bp] All: C 108,990 15 G vs. A 0.125 (G) 0.133 (G) 0.92 (0.88-0.95) 14 (0-52) 2.41e-05
rs11799420 chr1:171652978 VAMP4 [-16322bp] All: C 108,990 15 C vs. T 0.133 (C) 0.133 (C) 0.92 (0.88-0.95) 14 (0-52) 2.44e-05
rs10913559 chr1:171701487 VAMP4 All: C 108,990 15 T vs. C 0.242 (T) 0.35 (T) 0.93 (0.90-0.96) 35 (0-65) 2.54e-05
rs9661596 chr1:171652664 VAMP4 [-16636bp] All: C 108,990 15 A vs. G 0.133 (A) 0.133 (A) 0.92 (0.88-0.96) 16 (0-53) 2.69e-05
rs11811780 chr1:171652759 VAMP4 [-16541bp] All: C 108,990 15 G vs. A 0.133 (G) 0.133 (G) 0.92 (0.88-0.95) 14 (0-52) 2.73e-05
rs9662174 chr1:171652144 VAMP4 [-17156bp] All: C 108,990 15 T vs. C 0.133 (T) 0.133 (T) 0.92 (0.88-0.96) 16 (0-54) 2.73e-05
rs6659874 chr1:171654180 VAMP4 [-15120bp] All: C 108,990 15 A vs. C 0.133 (A) 0.133 (A) 0.92 (0.88-0.96) 17 (0-54) 2.77e-05
rs6701553 chr1:171654456 VAMP4 [-14844bp] All: C 108,990 15 A vs. G 0.133 (A) 0.117 (A) 0.92 (0.88-0.96) 17 (0-54) 2.77e-05
rs11576221 chr1:171653696 VAMP4 [-15604bp] All: C 108,990 15 G vs. A 0.133 (G) 0.133 (G) 0.92 (0.88-0.96) 15 (0-53) 2.79e-05
rs6688018 chr1:171650545 VAMP4 [-18755bp] All: C 108,990 15 G vs. A - - 1.09 (1.05-1.14) 17 (0-54) 2.81e-05
rs6667559 chr1:171653957 VAMP4 [-15343bp] All: C 108,990 15 C vs. T 0.133 (C) 0.133 (C) 0.92 (0.88-0.96) 17 (0-54) 2.82e-05

Association studies for this region [+]