VAMP4, chr1:171669300-171711387 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10913565 chr1:171706706 VAMP4 All: C 108,990 15 G vs. A 0.133 (G) 0.142 (G) 0.91 (0.88-0.95) 0 (0-50) 5.35e-06
Meta_image?name=rs10913565

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146206654 chr1:171655687 VAMP4 [-13613bp] C - 12 A vs. T - - <1 (-) 15 (-) <0.05
rs9659578 chr1:171656124 VAMP4 [-13176bp] C - 12 A vs. G 0.25 (G) 0.342 (G) >1 (-) 34 (-) <0.05
rs12064907 chr1:171664500 VAMP4 [-4800bp] C - 12 A vs. G - - >1 (-) 19 (-) <0.05
rs7552245 chr1:171656531 VAMP4 [-12769bp] C - 12 A vs. C 0.125 (A) 0.1 (A) <1 (-) 7 (-) <0.05
rs12126566 chr1:171729930 VAMP4 [+18543bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12061843 chr1:171655685 VAMP4 [-13615bp] C - 12 A vs. T - - <1 (-) 41 (-) <0.05
rs150226763 chr1:171661230 VAMP4 [-8070bp] C - 12 T vs. C - - >1 (-) 9 (-) <0.05
rs111739198 chr1:171655857 VAMP4 [-13443bp] C - 12 A vs. G - - <1 (-) 16 (-) <0.05
rs12119553 chr1:171657943 VAMP4 [-11357bp] C - 12 T vs. C 0.108 (T) - <1 (-) 11 (-) <0.05
rs77145826 chr1:171623841 MYOC [+2018bp] C - 13 A vs. G 0.042 (G) - <1 (-) 56 (-) <0.05
rs12032340 chr1:171735198 METTL13 [-15590bp] C - 12 A vs. C 0.192 (C) 0.4 (C) >1 (-) 34 (-) <0.05
rs7514706 chr1:171656695 VAMP4 [-12605bp] C - 12 T vs. G 0.125 (G) - >1 (-) 7 (-) <0.05
rs201436474 chr1:171660760 VAMP4 [-8540bp] C - 12 C vs. G - - >1 (-) 18 (-) <0.05
rs2014613 chr1:171648037 VAMP4 [-21263bp] C - 13 T vs. C 0.092 (T) 0.117 (T) <1 (-) 26 (-) <0.05
rs7514701 chr1:171656676 VAMP4 [-12624bp] C - 12 A vs. T 0.083 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs12406473 chr1:171739295 METTL13 [-11493bp] C - 13 A vs. G 0.108 (G) 0.183 (G) >1 (-) 14 (-) >0.05
rs2636177 chr1:171648923 VAMP4 [-20377bp] C - 13 T vs. C 0.467 (C) 0.342 (T) >1 (-) 15 (-) >0.05
rs116281126 chr1:171689545 VAMP4 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs114549212 chr1:171643255 MYOC [+21432bp] C - 10 T vs. G 0.025 (T) - >1 (-) 0 (-) >0.05
rs7543682 chr1:171656678 VAMP4 [-12622bp] C - 12 A vs. G 0.083 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs6703259 chr1:171640660 MYOC [+18837bp] C - 13 A vs. G - - >1 (-) 25 (-) >0.05
rs114163042 chr1:171633581 MYOC [+11758bp] C - 13 A vs. G 0.033 (A) - >1 (-) 16 (-) >0.05
rs941942 chr1:171744722 METTL13 [-6066bp] C - 13 A vs. G 0.225 (A) 0.433 (A) <1 (-) 29 (-) >0.05
rs10489248 chr1:171645589 VAMP4 [-23711bp] C - 13 T vs. C 0.092 (C) 0.117 (C) >1 (-) 22 (-) >0.05
rs10913458 chr1:171642318 MYOC [+20495bp] C - 13 A vs. G 0.083 (G) 0.058 (G) >1 (-) 20 (-) >0.05
rs7551037 chr1:171735909 METTL13 [-14879bp] C - 13 T vs. C - - <1 (-) 32 (-) >0.05
rs2220556 chr1:171625677 MYOC [+3854bp] C - 13 T vs. G 0.083 (T) - >1 (-) 0 (-) >0.05
rs72717882 chr1:171630557 MYOC [+8734bp] C - 13 A vs. G 0.033 (A) - >1 (-) 14 (-) >0.05
rs150424205 chr1:171659173 VAMP4 [-10127bp] C - 12 A vs. G - - >1 (-) 20 (-) >0.05
rs56167663 chr1:171741759 METTL13 [-9029bp] C - 13 A vs. G 0.142 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs55705095 chr1:171737711 METTL13 [-13077bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs7528057 chr1:171661851 VAMP4 [-7449bp] C - 12 A vs. G - - >1 (-) 9 (-) >0.05
rs6692136 chr1:171737948 METTL13 [-12840bp] C - 13 A vs. G 0.192 (G) 0.4 (G) >1 (-) 33 (-) >0.05
rs10798634 chr1:171738346 METTL13 [-12442bp] C - 13 T vs. C 0.192 (T) 0.4 (T) <1 (-) 32 (-) >0.05
rs7542116 chr1:171735666 METTL13 [-15122bp] C - 13 A vs. G 0.192 (A) 0.4 (A) <1 (-) 32 (-) >0.05
rs11803889 chr1:171743575 METTL13 [-7213bp] C - 13 A vs. G 0.142 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs6425405 chr1:171734714 METTL13 [-16074bp] C - 13 T vs. G 0.192 (T) 0.4 (T) <1 (-) 32 (-) >0.05
rs12145593 chr1:171642524 MYOC [+20701bp] C - 13 A vs. G 0.058 (G) 0.092 (G) >1 (-) 22 (-) >0.05
rs12028128 chr1:171735205 METTL13 [-15583bp] C - 13 A vs. G 0.192 (A) 0.4 (A) <1 (-) 33 (-) >0.05
rs60956160 chr1:171741801 METTL13 [-8987bp] C - 13 A vs. C 0.217 (A) 0.433 (A) <1 (-) 28 (-) >0.05
rs60554980 chr1:171641490 MYOC [+19667bp] C - 13 A vs. C 0.067 (C) 0.108 (C) >1 (-) 27 (-) >0.05
rs12145527 chr1:171641745 MYOC [+19922bp] C - 13 T vs. C 0.067 (C) 0.108 (C) >1 (-) 27 (-) >0.05
rs116725158 chr1:171649089 VAMP4 [-20211bp] C - 12 T vs. C 0.033 (T) - <1 (-) 4 (-) >0.05
rs1027192 chr1:171636005 MYOC [+14182bp] C - 12 A vs. G 0.067 (A) 0.217 (A) <1 (-) 28 (-) >0.05
rs10798636 chr1:171743865 METTL13 [-6923bp] C - 13 A vs. G 0.225 (G) 0.442 (G) >1 (-) 22 (-) >0.05
rs11799961 chr1:171641019 MYOC [+19196bp] C - 13 A vs. C 0.058 (A) 0.1 (A) <1 (-) 22 (-) >0.05
rs12120828 chr1:171717696 VAMP4 [+6309bp] C - 13 A vs. T 0.125 (T) - <1 (-) 0 (-) >0.05
rs11799938 chr1:171640888 MYOC [+19065bp] C - 13 A vs. C 0.058 (A) 0.1 (A) <1 (-) 24 (-) >0.05
rs1894664 chr1:171628764 MYOC [+6941bp] C - 13 A vs. G - - >1 (-) 34 (-) >0.05
rs10913455 chr1:171641956 MYOC [+20133bp] C - 13 C vs. G 0.067 (C) 0.108 (C) <1 (-) 22 (-) >0.05

Association studies for this region [+]