VAMP4, chr1:171669300-171711387 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10913565 chr1:171706706 VAMP4 All: C 108,990 15 G vs. A 0.133 (G) 0.142 (G) 0.91 (0.88-0.95) 0 (0-50) 5.35e-06
Meta_image?name=rs10913565

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12144998 chr1:171701309 VAMP4 C - 11 T vs. C - - >1 (-) 23 (-) >0.05
rs61807082 chr1:171693485 VAMP4 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs12566700 chr1:171747180 METTL13 [-3608bp] C - 13 T vs. C 0.175 (C) 0.492 (C) >1 (-) 19 (-) >0.05
rs12127345 chr1:171736087 METTL13 [-14701bp] C - 11 A vs. C - - <1 (-) 24 (-) >0.05
rs10913482 chr1:171652583 VAMP4 [-16717bp] C - 12 T vs. C 0.117 (T) 0.208 (T) <1 (-) 3 (-) >0.05
rs114099765 chr1:171690351 VAMP4 C - 12 T vs. C 0.025 (C) - >1 (-) 14 (-) >0.05
rs78756423 chr1:171713877 VAMP4 [+2490bp] C - 7 A vs. G 0.008 (A) - >1 (-) 45 (-) >0.05
rs138972020 chr1:171714788 VAMP4 [+3401bp] C - 4 T vs. C - - >1 (-) 63 (-) >0.05
rs149957719 chr1:171744565 METTL13 [-6223bp] C - 12 A vs. G - - >1 (-) 18 (-) >0.05
rs6670534 chr1:171691290 VAMP4 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs61807084 chr1:171729298 VAMP4 [+17911bp] C - 12 A vs. G 0.05 (G) - <1 (-) 32 (-) >0.05
rs72717889 chr1:171656294 VAMP4 [-13006bp] C - 12 A vs. G 0.083 (A) - >1 (-) 0 (-) >0.05
rs144736558 chr1:171672288 VAMP4 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs147599919 chr1:171656933 VAMP4 [-12367bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs114993143 chr1:171731427 METTL13 [-19361bp] C - 3 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs12095503 chr1:171653329 VAMP4 [-15971bp] C - 13 T vs. C 0.117 (T) 0.208 (T) <1 (-) 20 (-) >0.05
rs6670549 chr1:171691340 VAMP4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs235922 chr1:171624145 MYOC [+2322bp] C - 13 A vs. C 0.45 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs72717895 chr1:171674248 VAMP4 C - 13 T vs. C 0.083 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs12034114 chr1:171675820 VAMP4 C - 13 T vs. C 0.083 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs10200871 chr1:171664271 VAMP4 [-5029bp] C - 13 T vs. C - - >1 (-) 34 (-) >0.05
rs114595164 chr1:171736386 METTL13 [-14402bp] C - 6 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs7543786 chr1:171636394 MYOC [+14571bp] C - 13 A vs. G 0.083 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs74626332 chr1:171670237 VAMP4 C - 13 T vs. C 0.083 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs72717887 chr1:171651874 VAMP4 [-17426bp] C - 13 T vs. C 0.117 (C) 0.192 (C) >1 (-) 19 (-) >0.05
rs73045827 chr1:171730547 VAMP4 [+19160bp] C - 13 T vs. C 0.033 (C) - >1 (-) 0 (-) >0.05
rs12035719 chr1:171622749 MYOC [+926bp] C - 13 C vs. G 0.117 (C) 0.15 (C) >1 (-) 0 (-) >0.05
chr1:171663957 chr1:171663957 VAMP4 [-5343bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs2232809 chr1:171750181 METTL13 [-607bp] C - 13 A vs. C 0.408 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs77805928 chr1:171633446 MYOC [+11623bp] C - 12 T vs. C - 0.217 (T) >1 (-) 7 (-) >0.05
rs34627492 chr1:171693996 VAMP4 C - 13 T vs. G 0.217 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs6659266 chr1:171686832 VAMP4 C - 13 A vs. T 0.083 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs114550823 chr1:171685888 VAMP4 C - 7 T vs. C 0.008 (T) - <1 (-) 37 (-) >0.05
rs12029218 chr1:171651364 VAMP4 [-17936bp] C - 13 A vs. C 0.083 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs236898 chr1:171674229 VAMP4 C - 13 A vs. C 0.2 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs72717900 chr1:171690238 VAMP4 C - 13 T vs. C 0.083 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs12024335 chr1:171666062 VAMP4 [-3238bp] C - 13 C vs. G 0.083 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs236894 chr1:171669823 VAMP4 C - 13 A vs. G 0.208 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs6695031 chr1:171674615 VAMP4 C - 13 T vs. C 0.117 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs57300412 chr1:171705182 VAMP4 C - 13 A vs. G 0.083 (A) - <1 (-) 0 (-) >0.05
rs16843227 chr1:171704957 VAMP4 C - 13 C vs. G 0.075 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs12567851 chr1:171698911 VAMP4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
chr1:171664346 chr1:171664346 VAMP4 [-4954bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs62046907 chr1:171664325 VAMP4 [-4975bp] All: C 108,990 15 T vs. C 0.083 (T) 0.108 (T) 1.01 (0.97-1.06) 0 (0-39) 0.696
rs7554793 chr1:171680912 VAMP4 C - 13 A vs. T 0.117 (T) 0.192 (T) >1 (-) 3 (-) >0.05
rs236897 chr1:171673941 VAMP4 C - 13 C vs. G 0.217 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs12089083 chr1:171702158 VAMP4 C - 13 A vs. G 0.117 (G) 0.192 (G) >1 (-) 6 (-) >0.05
rs145447719 chr1:171660434 VAMP4 [-8866bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2232819 chr1:171755182 METTL13 C - 12 A vs. G 0.217 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs58081399 chr1:171689527 VAMP4 C - 13 C vs. G 0.117 (C) 0.192 (C) <1 (-) 3 (-) >0.05

Association studies for this region [+]