VKORC1, chr16:31102163-31107301 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs14235 chr16:31121793 BCKDK All: C 120,238 21 A vs. G 0.45 (A) 0.092 (G) 1.10 (1.07-1.14) 31 (0-59) 3.63e-12
Meta_image?name=rs14235

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9929899 chr16:31062701 STX4 [+8405bp] All: C 108,990 15 A vs. C 0.442 (A) 0.083 (C) 1.09 (1.05-1.12) 15 (0-52) 3.84e-07
rs11647284 chr16:31077335 ZNF668 All: C 108,990 15 A vs. G 0.275 (A) 0.075 (A) 0.92 (0.89-0.95) 10 (0-48) 3.99e-07
rs56314408 chr16:31117389 BCKDK [-39bp] All: C 108,990 15 T vs. C 0.442 (T) 0.083 (C) 1.09 (1.05-1.12) 30 (0-62) 4.00e-07
rs1108431 chr16:31054607 STX4 [+311bp] All: C 108,990 15 T vs. C 0.267 (T) 0.083 (T) 0.92 (0.89-0.95) 11 (0-49) 4.10e-07
rs2303222 chr16:31085470 ZNF668 All: C 108,990 15 C vs. T 0.442 (C) 0.058 (T) 1.09 (1.05-1.12) 16 (0-53) 4.32e-07
rs28814987 chr16:31081460 ZNF668 All: C 108,990 15 C vs. T - - 1.09 (1.05-1.13) 12 (0-50) 4.42e-07
rs73530203 chr16:31099859 PRSS53 All: C 108,990 15 A vs. G 0.283 (A) 0.1 (A) 0.92 (0.89-0.95) 12 (0-50) 4.68e-07
rs11642003 chr16:31068391 ZNF668 [-3773bp] All: C 108,990 15 G vs. A - - 1.11 (1.06-1.15) 14 (0-52) 1.72e-06
rs11642303 chr16:31068392 ZNF668 [-3772bp] All: C 108,990 15 C vs. A - - 1.11 (1.06-1.15) 14 (0-52) 1.72e-06
rs7294 chr16:31102321 VKORC1 All: C 101,866 13 T vs. C 0.283 (T) 0.092 (T) 0.92 (0.89-0.96) 19 (0-57) 5.54e-06
rs1060506 chr16:31133449 KAT8 All: C 108,990 15 T vs. C 0.2 (T) 0.092 (T) 0.92 (0.89-0.96) 31 (0-63) 1.34e-05
rs11865499 chr16:31132250 KAT8 All: C 108,990 15 G vs. A 0.2 (G) 0.092 (G) 0.92 (0.89-0.96) 31 (0-63) 1.37e-05
rs59735493 chr16:31133100 KAT8 All: C 108,990 15 A vs. G 0.2 (A) 0.092 (A) 0.92 (0.89-0.96) 31 (0-63) 1.37e-05
rs28725459 chr16:31132662 KAT8 All: C 108,990 15 G vs. A - - 1.08 (1.04-1.12) 30 (0-62) 1.55e-05
rs1549299 chr16:31154146 PRSS36 All: C 108,990 15 G vs. A 0.208 (G) 0.067 (G) 0.92 (0.89-0.96) 34 (0-65) 1.81e-05
rs11864839 chr16:31095251 ZNF646 C - 13 C vs. G 0.283 (C) 0.092 (C) <1 (-) 25 (-) <1.00e-04
rs7199949 chr16:31096164 PRSS53 C - 13 C vs. G 0.283 (C) 0.05 (C) <1 (-) 19 (-) <1.00e-04
rs55766044 chr16:31117698 BCKDK All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 26 (0-60) 3.32e-05
rs889555 chr16:31122571 BCKDK All: C 108,990 15 T vs. C 0.2 (T) 0.092 (T) 0.93 (0.89-0.96) 26 (0-60) 3.39e-05
rs35713203 chr16:31090407 ZNF646 C - 13 C vs. G 0.283 (C) 0.092 (C) <1 (-) 14 (-) <1.00e-04
rs59061704 chr16:31062704 STX4 [+8408bp] C - 13 C vs. G 0.283 (C) 0.05 (C) <1 (-) 12 (-) <1.00e-04
rs61320757 chr16:31134059 KAT8 All: C 108,990 15 G vs. A - - 1.08 (1.04-1.12) 25 (0-60) 4.11e-05
rs2884738 chr16:31126321 KAT8 [-754bp] All: C 108,990 15 C vs. A - - 1.08 (1.04-1.12) 26 (0-60) 4.18e-05
rs2884737 chr16:31105554 VKORC1 C - 13 A vs. C 0.267 (C) - <1 (-) 0 (-) <1.00e-04
rs55667375 chr16:31155458 PRSS36 All: C 108,990 15 T vs. C 0.208 (T) 0.075 (T) 0.92 (0.89-0.96) 30 (0-62) 6.23e-05
rs78924645 chr16:31154358 PRSS36 All: C 108,990 15 A vs. G 0.208 (A) 0.058 (A) 0.93 (0.89-0.96) 32 (0-63) 1.38e-04
rs9923231 chr16:31107689 VKORC1 [+388bp] C - 13 T vs. C 0.442 (T) 0.083 (C) >1 (-) 0 (-) <0.05
rs2288004 chr16:31054040 STX4 C - 13 C vs. G 0.425 (C) 0.083 (G) >1 (-) 0 (-) <0.05
rs4889530 chr16:31065918 ZNF668 [-6246bp] C - 13 A vs. T 0.442 (A) 0.075 (T) >1 (-) 0 (-) <0.05
rs8050894 chr16:31104509 VKORC1 C - 13 C vs. G 0.442 (G) 0.092 (C) <1 (-) 0 (-) <0.05
rs11642535 chr16:31126688 KAT8 [-387bp] C - 13 A vs. C - - <1 (-) 7 (-) >0.05
rs62057089 chr16:31114904 BCKDK [-2524bp] C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs78522165 chr16:31090094 ZNF646 C - 11 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs72785511 chr16:31059325 STX4 [+5029bp] C - 12 T vs. C 0.075 (C) - >1 (-) 7 (-) >0.05
rs79912852 chr16:31154345 PRSS36 C - 11 A vs. G 0.125 (A) - <1 (-) 20 (-) >0.05
rs117451918 chr16:31133793 KAT8 C - 7 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs112766425 chr16:31149755 PRSS36 [-491bp] C - 12 A vs. G 0.042 (G) - >1 (-) 23 (-) >0.05
rs141391022 chr16:31149130 PRSS36 [-1116bp] C - 10 A vs. T - - >1 (-) 43 (-) >0.05
rs147208188 chr16:31145037 PRSS8 C - 10 A vs. G - - <1 (-) 43 (-) >0.05
rs72785547 chr16:31119554 BCKDK C - 13 A vs. G 0.342 (A) - <1 (-) 3 (-) >0.05
rs72785546 chr16:31119462 BCKDK C - 13 A vs. G 0.35 (A) - <1 (-) 5 (-) >0.05
rs56404782 chr16:31126535 KAT8 [-540bp] C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs8054249 chr16:31068761 ZNF668 [-3403bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs113495233 chr16:31066799 ZNF668 [-5365bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs56388508 chr16:31132510 KAT8 C - 13 T vs. C 0.35 (T) - <1 (-) 5 (-) >0.05
rs72785553 chr16:31138445 KAT8 C - 13 A vs. G 0.35 (A) - <1 (-) 6 (-) >0.05
rs17880887 chr16:31110501 VKORC1 [+3200bp] C - 13 T vs. G - - <1 (-) 12 (-) >0.05
rs17855606 chr16:31142271 KAT8 C - 13 A vs. G 0.35 (G) - >1 (-) 1 (-) >0.05
rs6565214 chr16:31059639 STX4 [+5343bp] C - 13 T vs. C - - >1 (-) 50 (-) >0.05
rs148529966 chr16:31056825 STX4 [+2529bp] C - 13 T vs. C - - >1 (-) 30 (-) >0.05

Association studies for this region [+]