YIPF1, chr1:54317392-54356407 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10489461 chr1:54289020 NDC1 All: C 108,990 15 T vs. C 0.058 (T) - 1.11 (1.06-1.16) 0 (0-29) 2.82e-05
Meta_image?name=rs10489461

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10489461 chr1:54289020 NDC1 All: C 108,990 15 T vs. C 0.058 (T) - 1.11 (1.06-1.16) 0 (0-29) 2.82e-05
rs111578074 chr1:54283836 NDC1 All: C 108,990 15 A vs. G 0.067 (A) 0.058 (A) 1.10 (1.05-1.15) 0 (-) 4.33e-05
rs115784208 chr1:54282323 NDC1 All: C 108,990 15 C vs. A 0.075 (C) 0.058 (C) 1.09 (1.05-1.14) 0 (0-6) 6.90e-05
rs72662323 chr1:54284551 NDC1 All: C 108,990 15 C vs. T 0.075 (C) 0.058 (C) 1.09 (1.05-1.14) 0 (0-9) 7.17e-05
rs4926614 chr1:54285530 NDC1 All: C 108,990 15 T vs. G 0.075 (T) 0.058 (T) 1.09 (1.05-1.14) 0 (0-9) 7.38e-05
rs12566280 chr1:54286313 NDC1 All: C 108,990 15 G vs. A 0.075 (G) 0.058 (G) 1.09 (1.05-1.14) 0 (0-9) 7.39e-05
rs60684032 chr1:54289826 NDC1 All: C 108,990 15 T vs. C 0.075 (T) 0.058 (T) 1.09 (1.05-1.14) 0 (0-10) 7.81e-05
rs12089209 chr1:54284814 NDC1 All: C 108,990 15 T vs. C 0.133 (T) 0.067 (T) 1.08 (1.04-1.13) 0 (0-42) 8.18e-05
rs1181152 chr1:54281836 NDC1 All: C 108,990 15 A vs. G - - 0.93 (0.89-0.96) 0 (0-44) 8.24e-05
rs1181187 chr1:54290398 NDC1 All: C 108,990 15 C vs. T 0.133 (C) 0.067 (C) 1.08 (1.04-1.13) 0 (0-41) 8.28e-05
rs1181147 chr1:54269087 NDC1 All: C 108,990 15 A vs. G 0.133 (A) 0.067 (A) 1.08 (1.04-1.12) 0 (0-45) 8.79e-05
rs1181153 chr1:54279837 NDC1 All: C 108,990 15 C vs. T - - 0.93 (0.89-0.96) 0 (0-45) 9.10e-05
rs1181190 chr1:54286763 NDC1 C - 13 C vs. G 0.108 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs41305860 chr1:54301458 NDC1 All: C 108,990 15 T vs. G 0.067 (T) 0.058 (T) 1.10 (1.05-1.16) 0 (0-17) 1.44e-04
rs1181174 chr1:54295292 NDC1 C - 13 T vs. C 0.133 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs1181148 chr1:54268873 NDC1 C - 13 C vs. G 0.133 (G) 0.058 (G) <1 (-) 0 (-) <0.05
rs12562843 chr1:54275152 NDC1 C - 13 C vs. G 0.075 (C) - >1 (-) 0 (-) <0.05
rs12564079 chr1:54290619 NDC1 C - 13 C vs. G 0.067 (C) 0.067 (C) >1 (-) 0 (-) <0.05
rs1181185 chr1:54292601 NDC1 C - 13 A vs. G 0.125 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs111324333 chr1:54291100 NDC1 C - 13 A vs. C - 0.067 (A) >1 (-) 0 (-) <0.05
rs1181154 chr1:54278286 NDC1 C - 13 A vs. T 0.125 (A) 0.042 (A) >1 (-) 0 (-) <0.05
rs35655487 chr1:54278471 NDC1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs112350581 chr1:54302624 NDC1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs4927041 chr1:54299440 NDC1 C - 13 A vs. G 0.125 (A) 0.067 (A) >1 (-) 0 (-) <0.05
rs113016399 chr1:54302323 NDC1 C - 13 T vs. C 0.067 (T) 0.05 (T) >1 (-) 0 (-) <0.05
rs2064457 chr1:54299674 NDC1 C - 13 A vs. G 0.125 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs72662332 chr1:54295139 NDC1 C - 13 C vs. G 0.067 (G) 0.058 (G) <1 (-) 0 (-) <0.05
rs4927040 chr1:54294766 NDC1 C - 13 A vs. G 0.067 (A) 0.05 (A) >1 (-) 0 (-) <0.05
rs55673156 chr1:54302824 NDC1 C - 13 T vs. C 0.067 (T) 0.058 (T) >1 (-) 0 (-) <0.05
rs72662336 chr1:54298297 NDC1 C - 13 T vs. C 0.058 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs59156571 chr1:54298716 NDC1 C - 13 C vs. G 0.067 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs34640823 chr1:54300430 NDC1 C - 13 A vs. C 0.308 (A) 0.242 (A) >1 (-) 0 (-) <0.05
rs17388535 chr1:54308972 NDC1 [+4439bp] C - 13 A vs. T 0.042 (T) - <1 (-) 0 (-) <0.05
rs140591470 chr1:54366234 DIO1 C - 4 A vs. G - - >1 (-) 0 (-) <0.05
rs17536501 chr1:54271830 NDC1 C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) <0.05
rs144999424 chr1:54365194 DIO1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs17388570 chr1:54311234 YIPF1 [-6158bp] C - 13 T vs. C 0.058 (T) 0.05 (T) >1 (-) 6 (-) <0.05
rs150382209 chr1:54312060 YIPF1 [-5332bp] C - 13 T vs. C - - >1 (-) 6 (-) <0.05
rs12033572 chr1:54369674 DIO1 C - 13 C vs. G 0.058 (C) 0.033 (C) >1 (-) 31 (-) <0.05
rs10888811 chr1:54337886 YIPF1 C - 13 A vs. G 0.492 (A) 0.142 (G) <1 (-) 11 (-) <0.05
rs7515148 chr1:54369261 DIO1 C - 13 T vs. C - - >1 (-) 31 (-) <0.05
rs115448697 chr1:54342517 YIPF1 C - 13 T vs. C 0.05 (C) - <1 (-) 23 (-) <0.05
rs4927043 chr1:54366599 DIO1 C - 13 A vs. G 0.042 (A) 0.0 (A) >1 (-) 22 (-) >0.05
rs146980201 chr1:54391040 HSPB11 C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs114350854 chr1:54379366 DIO1 [+2607bp] C - 7 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs1181096 chr1:54326301 YIPF1 C - 13 A vs. C 0.367 (A) 0.35 (C) <1 (-) 0 (-) >0.05
rs1181097 chr1:54326490 YIPF1 C - 13 A vs. T 0.367 (A) 0.35 (T) <1 (-) 0 (-) >0.05
rs11206229 chr1:54324579 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 0 (-) >0.05
rs144885969 chr1:54377136 DIO1 [+377bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs79143828 chr1:54311653 YIPF1 [-5739bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]