ZYG11A, chr1:53308183-53360670 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242327 chr1:53399073 SCP2 C - 12 A vs. G 0.108 (A) 0.008 (A) >1 (-) 5 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242327 chr1:53399073 SCP2 C - 12 A vs. G 0.108 (A) 0.008 (A) >1 (-) 5 (-) <0.05
rs537822 chr1:53342954 ZYG11A C - 13 T vs. C 0.108 (C) 0.175 (C) <1 (-) 0 (-) <0.05
rs528411 chr1:53277580 ZYG11B C - 13 A vs. G 0.058 (A) 0.125 (A) >1 (-) 2 (-) <0.05
rs10788945 chr1:53323492 ZYG11A C - 13 A vs. C 0.092 (C) 0.133 (C) <1 (-) 14 (-) <0.05
rs112456632 chr1:53312964 ZYG11A C - 9 T vs. C - - >1 (-) 0 (-) <0.05
rs111252162 chr1:53340832 ZYG11A C - 9 A vs. G - - <1 (-) 0 (-) <0.05
rs143406913 chr1:53299593 ZYG11B [+6579bp] C - 5 A vs. C - - >1 (-) 0 (-) <0.05
rs145784476 chr1:53261875 ZYG11B C - 11 A vs. T - - >1 (-) 0 (-) <0.05
rs116429142 chr1:53405481 SCP2 C - 3 A vs. G 0.042 (G) - <1 (-) 0 (-) <0.05
rs141754551 chr1:53265676 ZYG11B C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs7524175 chr1:53320485 ZYG11A C - 11 C vs. G - - <1 (-) 0 (-) <0.05
rs115446447 chr1:53273763 ZYG11B C - 5 A vs. G - - >1 (-) 0 (-) <0.05
rs138850299 chr1:53323958 ZYG11A C - 11 A vs. C - - >1 (-) 0 (-) <0.05
rs115538788 chr1:53272704 ZYG11B C - 11 A vs. C - - >1 (-) 0 (-) <0.05
rs61744306 chr1:53326421 ZYG11A C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs141473055 chr1:53327244 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs147556638 chr1:53329153 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs147862590 chr1:53329908 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs78829384 chr1:53352035 ZYG11A C - 5 T vs. C - - <1 (-) 30 (-) <0.05
rs147177369 chr1:53332430 ZYG11A C - 11 T vs. G - - >1 (-) 0 (-) >0.05
rs77879994 chr1:53309844 ZYG11A C - 11 A vs. T - - >1 (-) 0 (-) >0.05
rs149273936 chr1:53310171 ZYG11A C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs116779030 chr1:53344103 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs76822490 chr1:53344826 ZYG11A C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs60442198 chr1:53315940 ZYG11A C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs79250149 chr1:53315814 ZYG11A C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs112013548 chr1:53345847 ZYG11A C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs113977177 chr1:53337238 ZYG11A C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs112213522 chr1:53316861 ZYG11A C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs150175951 chr1:53351644 ZYG11A C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs78190981 chr1:53302558 ZYG11A [-5625bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs487453 chr1:53271225 ZYG11B C - 13 T vs. C 0.367 (C) 0.3 (T) <1 (-) 0 (-) >0.05
rs7548519 chr1:53294473 ZYG11B [+1459bp] C - 13 A vs. G 0.392 (A) 0.283 (G) >1 (-) 0 (-) >0.05
rs11206043 chr1:53402552 SCP2 C - 12 T vs. C 0.3 (C) 0.267 (T) <1 (-) 1 (-) >0.05
rs521288 chr1:53273958 ZYG11B C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7417821 chr1:53295117 ZYG11B [+2103bp] C - 13 A vs. G 0.375 (A) 0.283 (G) >1 (-) 0 (-) >0.05
rs479581 chr1:53278517 ZYG11B C - 13 C vs. G - 0.35 (G) >1 (-) 0 (-) >0.05
rs1242331 chr1:53392908 SCP2 C - 13 A vs. G 0.292 (A) - >1 (-) 0 (-) >0.05
rs1672917 chr1:53291550 ZYG11B C - 13 A vs. G 0.358 (A) - >1 (-) 0 (-) >0.05
rs475969 chr1:53292607 ZYG11B C - 13 A vs. T 0.317 (T) 0.342 (A) <1 (-) 0 (-) >0.05
rs551720 chr1:53297142 ZYG11B [+4128bp] C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs497535 chr1:53284677 ZYG11B C - 13 A vs. G 0.367 (G) 0.008 (A) <1 (-) 0 (-) >0.05
rs564640 chr1:53285187 ZYG11B C - 13 T vs. C 0.358 (C) 0.008 (T) <1 (-) 5 (-) >0.05
rs551435 chr1:53260537 ZYG11B C - 13 T vs. G 0.375 (T) 0.008 (G) >1 (-) 0 (-) >0.05
rs1749907 chr1:53259658 ZYG11B C - 13 T vs. C 0.375 (T) 0.008 (C) >1 (-) 0 (-) >0.05
rs554760 chr1:53266749 ZYG11B C - 13 A vs. G 0.375 (A) 0.008 (G) >1 (-) 0 (-) >0.05
rs7548389 chr1:53404211 SCP2 C - 13 T vs. C 0.35 (C) 0.042 (T) <1 (-) 0 (-) >0.05
rs2477741 chr1:53265278 ZYG11B C - 13 A vs. G 0.375 (G) 0.008 (A) <1 (-) 0 (-) >0.05
rs2448792 chr1:53268313 ZYG11B C - 13 T vs. C 0.375 (C) 0.0 (T) <1 (-) 0 (-) >0.05
rs4351588 chr1:53263826 ZYG11B C - 13 A vs. T 0.308 (T) 0.342 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.