ZYG11A, chr1:53308183-53360670 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242327 chr1:53399073 SCP2 C - 12 A vs. G 0.108 (A) 0.008 (A) >1 (-) 5 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78682257 chr1:53409094 SCP2 C - 9 T vs. C - - >1 (-) 19 (-) >0.05
rs7528967 chr1:53304747 ZYG11A [-3436bp] C - 13 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs2275758 chr1:53377125 ECHDC2 C - 13 A vs. G 0.025 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs6666902 chr1:53409444 SCP2 C - 12 T vs. C - - >1 (-) 16 (-) >0.05
rs3820268 chr1:53380515 ECHDC2 C - 13 C vs. G 0.025 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs114329901 chr1:53395909 SCP2 C - 12 A vs. G - - <1 (-) 17 (-) >0.05
rs74482100 chr1:53383320 ECHDC2 C - 13 T vs. C 0.025 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs115828273 chr1:53375516 ECHDC2 C - 12 A vs. G - - >1 (-) 16 (-) >0.05
rs12731800 chr1:53286967 ZYG11B C - 13 A vs. G 0.067 (G) 0.042 (G) <1 (-) 0 (-) >0.05
chr1:53378967 chr1:53378967 ECHDC2 C - 4 A vs. G - - <1 (-) 60 (-) >0.05
rs12747778 chr1:53302842 ZYG11A [-5341bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs77789053 chr1:53269701 ZYG11B C - 13 T vs. C 0.067 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs36049921 chr1:53270228 ZYG11B C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs56158723 chr1:53270528 ZYG11B C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs71654975 chr1:53271802 ZYG11B C - 13 A vs. G 0.067 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs144341764 chr1:53363700 ECHDC2 C - 12 A vs. G - - >1 (-) 16 (-) >0.05
rs12076197 chr1:53409573 SCP2 C - 7 C vs. G - - >1 (-) 28 (-) >0.05
rs146285200 chr1:53344529 ZYG11A C - 12 T vs. C - - <1 (-) 15 (-) >0.05
rs79906090 chr1:53396076 SCP2 C - 13 T vs. C - 0.217 (T) >1 (-) 0 (-) >0.05
rs61671409 chr1:53396324 SCP2 C - 13 A vs. G 0.025 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs61199247 chr1:53396558 SCP2 C - 13 T vs. C 0.025 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs17107484 chr1:53410388 SCP2 C - 13 A vs. G 0.025 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs76971537 chr1:53406768 SCP2 C - 13 T vs. C 0.025 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs60813156 chr1:53402536 SCP2 C - 13 A vs. C 0.025 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs74728094 chr1:53406738 SCP2 C - 13 T vs. C 0.025 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs115802509 chr1:53405698 SCP2 C - 13 T vs. C 0.025 (T) 0.217 (T) >1 (-) 0 (-) >0.05
rs11584094 chr1:53305616 ZYG11A [-2567bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs75591330 chr1:53313035 ZYG11A C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs149105987 chr1:53409722 SCP2 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs146681934 chr1:53409019 SCP2 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs3753756 chr1:53380922 ECHDC2 C - 10 T vs. G - 0.292 (G) >1 (-) 38 (-) >0.05
rs111258468 chr1:53400625 SCP2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs116363395 chr1:53265381 ZYG11B C - 8 T vs. C 0.042 (T) - <1 (-) 50 (-) >0.05
rs114672523 chr1:53374976 ECHDC2 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs80057615 chr1:53345187 ZYG11A C - 12 A vs. G - - >1 (-) 22 (-) >0.05
rs147821352 chr1:53410566 SCP2 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs17107438 chr1:53309807 ZYG11A C - 13 A vs. G 0.067 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs111953571 chr1:53369342 ECHDC2 C - 12 T vs. C - - >1 (-) 15 (-) >0.05
rs111523744 chr1:53405288 SCP2 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs140993476 chr1:53396189 SCP2 C - 13 A vs. T - - >1 (-) 30 (-) >0.05
rs78566762 chr1:53384662 ECHDC2 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs79320888 chr1:53332741 ZYG11A C - 5 T vs. C - 0.092 (T) >1 (-) 58 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.