Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (Ashkenazi) C UKPDSBB CL 268 (33%) 178 (57%) 60 (12) - - - 70 (9) - 9,631

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72909244 chr18:44712130 IER3IP1 [+9385bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-45) 7.62e-05
rs10520715 chr18:44713275 IER3IP1 [+10530bp] C vs. A All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-45) 8.35e-05
rs72909248 chr18:44713737 IER3IP1 [+10992bp] C vs. A All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-46) 8.19e-05
rs11877644 chr18:44719611 IER3IP1 [+16866bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-45) 8.08e-05
rs10468987 chr18:44720241 IER3IP1 [+17496bp] G vs. T All: C 15 108,990 0.108 (G) 0.158 (G) 1.10 (1.05-1.16) 0 (0-45) 8.04e-05
rs11874862 chr18:44721752 IER3IP1 [+19007bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-46) 8.16e-05
rs11877745 chr18:44721892 IER3IP1 [+19147bp] A vs. C All: C 15 108,990 0.108 (A) 0.158 (A) 1.11 (1.05-1.16) 0 (0-48) 6.94e-05
rs11875558 chr18:44722179 IER3IP1 [+19434bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-47) 8.85e-05
rs60859098 chr18:44722979 IER3IP1 [+20234bp] G vs. A All: C 15 108,990 0.108 (G) 0.158 (G) 1.10 (1.05-1.16) 0 (0-46) 8.19e-05
rs72909271 chr18:44724846 SKOR2 [-21447bp] T vs. G All: C 15 108,990 0.1 (T) 0.158 (T) 1.10 (1.05-1.16) 0 (0-46) 8.43e-05
rs11082565 chr18:44725768 SKOR2 [-20525bp] A vs. G All: C 15 108,990 0.108 (A) 0.158 (A) 1.11 (1.05-1.17) 0 (0-42) 7.86e-05
rs12326980 chr18:44726171 SKOR2 [-20122bp] G vs. A All: C 15 108,990 0.108 (G) 0.158 (G) 1.11 (1.05-1.16) 0 (0-46) 6.04e-05
rs12327400 chr18:44727998 SKOR2 [-18295bp] A vs. G All: C 15 108,990 0.108 (A) 0.158 (A) 1.11 (1.05-1.16) 0 (0-45) 5.07e-05
rs17784795 chr18:44728744 SKOR2 [-17549bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.10 (1.05-1.16) 0 (0-47) 9.88e-05
rs11873315 chr18:44730823 SKOR2 [-15470bp] G vs. A All: C 15 108,990 0.108 (G) 0.158 (G) 1.11 (1.05-1.16) 0 (0-47) 6.52e-05
rs11082566 chr18:44731076 SKOR2 [-15217bp] T vs. C All: C 15 108,990 0.117 (T) 0.158 (T) 1.11 (1.05-1.16) 0 (0-47) 5.20e-05
rs17784867 chr18:44732687 SKOR2 [-13606bp] C vs. T All: C 15 108,990 0.108 (C) 0.158 (C) 1.11 (1.05-1.16) 0 (0-47) 6.63e-05
rs76984555 chr18:46367492 CTIF A vs. G All: C 14 105,041 0.033 (A) 0.417 (A) 0.86 (0.79-0.93) 0 (0-46) 8.73e-05
rs16950052 chr18:46382353 CTIF C vs. T All: C 14 105,041 0.058 (C) 0.425 (C) 0.87 (0.81-0.93) 0 (0-51) 7.45e-05
rs141070920 chr18:46389511 CTIF G vs. A All: C 14 105,041 - - 1.20 (1.10-1.31) 14 (0-53) 4.60e-05
rs75368394 chr18:50301737 DCC C vs. A All: C 15 108,990 0.108 (C) - 1.13 (1.07-1.20) 4 (0-56) 2.57e-05
rs113902371 chr18:50301765 DCC C vs. T All: C 15 108,990 0.108 (C) - 1.13 (1.07-1.20) 4 (0-56) 2.59e-05
rs9954223 chr18:50301788 DCC G vs. A All: C 15 108,990 0.108 (G) - 1.11 (1.06-1.17) 0 (0-51) 6.68e-05
rs9954366 chr18:50301832 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.06-1.17) 0 (0-50) 7.27e-05
rs9954387 chr18:50301888 DCC T vs. C All: C 15 108,990 0.108 (T) - 1.11 (1.06-1.17) 0 (0-51) 7.27e-05
rs9956954 chr18:50302147 DCC T vs. C All: C 15 108,990 0.108 (T) - 1.11 (1.06-1.17) 0 (0-49) 6.88e-05
rs9946240 chr18:50302221 DCC C vs. T All: C 15 108,990 0.108 (C) 0.033 (C) 1.11 (1.05-1.17) 0 (0-51) 7.47e-05
rs9957066 chr18:50302280 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-51) 7.42e-05
rs28720976 chr18:50302448 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-51) 7.76e-05
rs28710315 chr18:50302476 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-50) 8.23e-05
rs9947544 chr18:50334201 DCC A vs. G All: C 15 108,990 0.108 (A) - 1.11 (1.05-1.17) 13 (0-51) 1.00e-04
rs112373415 chr18:50335927 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 14 (0-52) 9.62e-05
rs4330004 chr18:50337632 DCC A vs. G All: C 15 108,990 0.108 (A) - 1.11 (1.05-1.17) 13 (0-51) 9.15e-05
rs1431735 chr18:50337688 DCC A vs. G All: C 15 108,990 0.108 (A) 0.017 (A) 1.11 (1.05-1.17) 14 (0-52) 8.80e-05
rs9964103 chr18:50339432 DCC T vs. G All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 13 (0-51) 1.14e-04
rs11082949 chr18:50340987 DCC G vs. A All: C 15 108,990 0.1 (G) 0.167 (G) 1.11 (1.05-1.16) 12 (0-50) 1.35e-04
rs112315835 chr18:50344725 DCC T vs. C All: C 15 108,990 0.108 (T) 0.167 (T) 1.11 (1.05-1.17) 12 (0-50) 1.26e-04
rs16955568 chr18:50345028 DCC A vs. C All: C 15 108,990 0.108 (A) 0.167 (A) 1.11 (1.05-1.17) 11 (0-49) 9.72e-05
rs9304433 chr18:50345783 DCC T vs. G All: C 15 108,990 0.108 (T) 0.167 (T) 1.12 (1.06-1.19) 22 (0-58) 7.94e-05
rs62091919 chr18:67950442 SOCS6 [-5695bp] G vs. T All: C 15 108,990 0.167 (G) 0.117 (G) 1.09 (1.04-1.14) 0 (0-38) 7.23e-05
rs7242186 chr18:67981861 SOCS6 G vs. A All: C 15 108,990 0.225 (G) 0.092 (G) 1.07 (1.04-1.11) 0 (0-28) 1.31e-04
rs7244655 chr18:67986087 SOCS6 G vs. A All: C 15 108,990 - - 0.93 (0.89-0.96) 0 (0-43) 4.76e-05
rs72967810 chr18:72031638 C18orf63 [+5216bp] C vs. A All: C 15 108,990 0.192 (C) 0.025 (C) 1.11 (1.06-1.17) 2 (0-55) 7.83e-05
rs75277584 chr18:72031845 C18orf63 [+5423bp] C vs. T All: C 15 108,990 - - 0.90 (0.85-0.95) 0 (0-53) 5.90e-05
rs139883368 chr18:72031982 C18orf63 [+5560bp] A vs. C All: C 15 108,990 - - 0.90 (0.85-0.95) 0 (0-53) 5.93e-05
rs72967819 chr18:72033573 C18orf63 [+7151bp] A vs. G All: C 15 108,990 0.167 (A) 0.05 (A) 1.11 (1.05-1.16) 0 (0-53) 5.52e-05
rs2096948 chr18:72041185 C18orf63 [+14763bp] C vs. T All: C 15 108,990 0.117 (C) 0.033 (C) 1.10 (1.05-1.16) 9 (0-46) 1.42e-04
rs12458543 chr18:72042407 C18orf63 [+15985bp] C vs. T All: C 15 108,990 0.1 (C) 0.033 (C) 1.12 (1.06-1.19) 0 (0-53) 8.95e-05
rs4534977 chr19:1952090 CSNK1G2 G vs. A All: C 14 103,235 0.442 (G) 0.342 (A) 1.03 (0.99-1.06) 0 (0-54) 0.109
rs11084921 chr19:1952280 CSNK1G2 T vs. C All: C 14 103,235 0.442 (T) 0.342 (C) 1.03 (0.99-1.06) 0 (0-55) 0.111