Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (HIHG) C UKPDSBB CL 574 (37%) 619 (65%) 57 (12) - - - 69 (10) - 9,723

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62155733 chr2:102370764 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.5 (T) 1.08 (1.04-1.11) 25 (0-60) 1.47e-05
rs71415327 chr2:102377069 MAP4K4 G vs. A All: C 15 108,990 0.392 (G) 0.483 (G) 1.08 (1.04-1.11) 27 (0-61) 1.45e-05
rs12476714 chr2:102378374 MAP4K4 G vs. A All: C 15 108,990 0.375 (G) 0.492 (G) 1.08 (1.04-1.11) 28 (0-61) 1.47e-05
rs13019379 chr2:102378535 MAP4K4 C vs. A All: C 15 108,990 0.392 (C) 0.492 (C) 1.08 (1.04-1.11) 29 (0-62) 1.50e-05
rs2068397 chr2:102378744 MAP4K4 A vs. C All: C 15 108,990 0.392 (A) 0.5 (A) 1.08 (1.04-1.11) 26 (0-60) 1.46e-05
rs4595997 chr2:102382499 MAP4K4 A vs. G All: C 15 108,990 0.375 (A) 0.483 (A) 1.08 (1.04-1.11) 27 (0-61) 1.10e-05
rs7569169 chr2:102389681 MAP4K4 G vs. A All: C 15 108,990 0.367 (G) 0.492 (G) 1.08 (1.04-1.11) 28 (0-61) 1.06e-05
rs35429183 chr2:102409288 MAP4K4 A vs. G All: C 15 108,990 0.383 (A) 0.492 (A) 1.08 (1.04-1.11) 22 (0-58) 1.05e-05
rs34043159 chr2:102413116 MAP4K4 C vs. T All: C 15 108,990 0.383 (C) 0.5 (C) 1.08 (1.04-1.12) 19 (0-55) 6.22e-06
rs6543097 chr2:102421721 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.5 (T) 1.08 (1.04-1.11) 28 (0-61) 1.10e-05
rs6732726 chr2:102421978 MAP4K4 C vs. T All: C 15 108,990 0.383 (C) 0.492 (C) 1.08 (1.04-1.11) 28 (0-61) 1.10e-05
rs11686650 chr2:102426591 MAP4K4 T vs. G All: C 15 108,990 0.392 (T) 0.492 (T) 1.08 (1.04-1.11) 21 (0-57) 1.65e-05
rs7564764 chr2:102427022 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.492 (T) 1.08 (1.04-1.11) 28 (0-61) 1.25e-05
rs13019066 chr2:102436119 MAP4K4 G vs. A All: C 15 108,990 0.392 (G) 0.483 (G) 1.08 (1.04-1.11) 26 (0-60) 1.01e-05
rs12469922 chr2:102437513 MAP4K4 G vs. A All: C 15 108,990 0.375 (G) 0.4 (A) 1.08 (1.04-1.12) 27 (0-61) 7.26e-06
rs2286240 chr2:102440166 MAP4K4 A vs. G All: C 15 108,990 0.383 (A) 0.492 (A) 1.08 (1.04-1.11) 27 (0-61) 1.09e-05
rs62305152 chr2:113371406 CHCHD5 [+24554bp] A vs. G All: C 15 108,990 - - 1.17 (1.10-1.25) 53 (16-74) 2.52e-06
rs75971673 chr2:126193505 intergenic G vs. A All: C 15 108,990 0.017 (G) 0.067 (G) 1.31 (1.12-1.53) 0 (0-50) 7.91e-04
rs111967545 chr2:126256749 intergenic G vs. A All: C 15 108,990 0.017 (G) 0.05 (G) 1.35 (1.15-1.58) 0 (0-52) 2.07e-04
rs76638943 chr2:126272031 intergenic G vs. A All: C 15 108,990 0.008 (G) 0.092 (G) 1.37 (1.17-1.61) 0 (0-53) 8.87e-05
rs60032637 chr2:126279884 intergenic A vs. G All: C 15 108,990 0.017 (A) 0.067 (A) 1.48 (1.22-1.78) 12 (0-50) 5.45e-05
rs61710256 chr2:126279937 intergenic C vs. A All: C 15 108,990 0.017 (C) 0.067 (C) 1.38 (1.18-1.62) 1 (0-54) 6.32e-05
rs118167691 chr2:126280137 intergenic A vs. G All: C 15 108,990 - 0.067 (G) 0.68 (0.56-0.82) 12 (0-50) 5.24e-05
rs114598144 chr2:126288330 intergenic A vs. G All: C 15 108,990 0.017 (A) - 1.39 (1.18-1.62) 2 (0-55) 5.49e-05
rs77508358 chr2:126296415 intergenic A vs. G All: C 15 108,990 0.017 (A) - 1.37 (1.17-1.61) 3 (0-55) 9.84e-05
rs11895856 chr2:126301495 intergenic T vs. C All: C 15 108,990 0.017 (T) 0.042 (T) 1.45 (1.22-1.72) 0 (0-51) 2.06e-05
rs78157643 chr2:126313781 intergenic T vs. G All: C 15 108,990 0.017 (T) 0.05 (T) 1.39 (1.18-1.63) 6 (0-57) 6.58e-05
rs76857553 chr2:126314058 intergenic G vs. A All: C 15 108,990 0.017 (G) - 1.39 (1.18-1.63) 6 (0-57) 6.54e-05
rs113602434 chr2:126314349 intergenic T vs. C All: C 15 108,990 0.025 (T) 0.05 (T) 1.39 (1.18-1.63) 6 (0-57) 6.49e-05
rs11902379 chr2:126316417 intergenic G vs. A All: C 15 108,990 - - 0.72 (0.61-0.85) 6 (0-57) 6.06e-05
rs111478744 chr2:126320083 intergenic A vs. G All: C 15 108,990 0.008 (A) 0.05 (A) 1.41 (1.20-1.67) 4 (0-56) 4.28e-05
rs113651137 chr2:126323022 intergenic C vs. A All: C 15 108,990 - 0.008 (A) 0.68 (0.58-0.81) 0 (0-53) 1.54e-05
rs62166632 chr2:134839924 MGAT5 [-37630bp] A vs. G All: C 15 108,990 0.158 (A) 0.275 (A) 1.10 (1.05-1.15) 0 (0-29) 4.07e-05
rs9287434 chr2:134853516 MGAT5 [-24038bp] G vs. A All: C 15 108,990 0.167 (G) 0.275 (G) 1.09 (1.04-1.14) 27 (0-60) 2.73e-04
rs74405316 chr2:134993498 MGAT5 T vs. C All: C 15 108,990 0.075 (T) - 0.88 (0.81-0.96) 15 (0-53) 0.003
rs111337576 chr2:135004470 MGAT5 G vs. A All: C 15 108,990 0.058 (G) - 0.87 (0.80-0.95) 12 (0-50) 0.002
rs606101 chr2:135284307 TMEM163 A vs. G All: C 15 108,990 0.442 (A) 0.0 (A) 1.08 (1.04-1.11) 52 (13-73) 1.47e-05
rs512375 chr2:135285279 TMEM163 G vs. T All: C 15 108,990 0.442 (G) 0.242 (G) 1.08 (1.04-1.11) 47 (3-71) 5.81e-06
rs578384 chr2:135287914 TMEM163 T vs. C All: C 15 108,990 0.442 (T) 0.0 (T) 1.08 (1.05-1.12) 51 (11-73) 1.64e-06
rs655472 chr2:135290221 TMEM163 T vs. C All: C 15 108,990 0.475 (T) 0.183 (T) 1.09 (1.05-1.12) 42 (0-69) 1.14e-06
rs669759 chr2:135291135 TMEM163 C vs. T All: C 15 108,990 0.433 (C) 0.0 (C) 1.09 (1.06-1.13) 52 (13-73) 1.48e-07
rs569350 chr2:135293494 TMEM163 G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 43 (0-69) 4.21e-06
rs606076 chr2:135294082 TMEM163 T vs. C All: C 15 108,990 0.458 (T) 0.183 (T) 1.09 (1.05-1.12) 43 (0-69) 1.04e-06
rs621341 chr2:135295180 TMEM163 T vs. C All: C 15 108,990 0.433 (T) 0.0 (T) 1.09 (1.06-1.13) 52 (13-73) 1.32e-07
rs613828 chr2:135298713 TMEM163 G vs. T All: C 15 108,990 0.458 (G) 0.183 (G) 1.08 (1.05-1.12) 48 (5-71) 2.47e-06
rs614356 chr2:135298862 TMEM163 T vs. C All: C 15 108,990 0.458 (T) 0.183 (T) 1.08 (1.05-1.12) 48 (5-71) 2.48e-06
rs643796 chr2:135300858 TMEM163 A vs. G All: C 15 108,990 0.433 (A) 0.192 (A) 1.08 (1.05-1.12) 47 (4-71) 2.30e-06
rs487404 chr2:135300861 TMEM163 A vs. G All: C 15 108,990 0.433 (A) 0.2 (A) 1.08 (1.05-1.12) 47 (4-71) 2.28e-06
rs842362 chr2:135341120 TMEM163 A vs. G All: C 15 108,990 0.283 (A) 0.492 (G) 0.93 (0.90-0.96) 0 (0-51) 1.77e-05
rs859767 chr2:135341200 TMEM163 G vs. A All: C 15 108,990 0.308 (G) 0.492 (A) 0.92 (0.89-0.95) 0 (0-42) 1.48e-06