Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (HIHG) C UKPDSBB CL 574 (37%) 619 (65%) 57 (12) - - - 69 (10) - 9,723

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs61824662 chr1:205649447 SLC45A3 G vs. A All: C 15 108,990 - 0.192 (A) 1.23 (1.11-1.35) 0 (0-50) 5.02e-05
rs61824663 chr1:205651850 SLC45A3 [+2263bp] G vs. A All: C 15 108,990 - - 1.25 (1.13-1.37) 11 (0-49) 5.32e-06
rs4245718 chr1:205652472 SLC45A3 [+2885bp] A vs. G All: C 15 108,990 0.308 (A) 0.442 (A) 0.92 (0.89-0.96) 31 (0-63) 9.23e-06
rs12402185 chr1:205655549 SLC45A3 [+5962bp] G vs. T All: C 15 108,990 - 0.192 (T) 1.25 (1.14-1.37) 11 (0-49) 3.97e-06
rs4601639 chr1:205656583 SLC45A3 [+6996bp] C vs. T All: C 15 108,990 0.308 (C) 0.45 (C) 0.92 (0.89-0.95) 31 (0-63) 7.18e-06
rs823105 chr1:205657570 SLC45A3 [+7983bp] G vs. A All: C 15 108,990 0.425 (G) - 0.96 (0.93-0.99) 0 (0-49) 0.006
rs12037559 chr1:205661964 SLC45A3 [+12377bp] T vs. C All: C 15 108,990 0.283 (T) 0.433 (T) 0.93 (0.89-0.96) 29 (0-62) 4.60e-05
rs1172198 chr1:205662718 SLC45A3 [+13131bp] G vs. A All: C 15 108,990 0.425 (G) - 0.96 (0.93-0.99) 5 (0-56) 0.018
rs12118655 chr1:205663478 SLC45A3 [+13891bp] G vs. A All: C 15 108,990 0.033 (G) 0.358 (G) 1.14 (1.09-1.20) 9 (0-47) 4.38e-08
rs823101 chr1:205667006 NUCKS1 [-14941bp] T vs. C All: C 15 108,990 0.433 (T) - 0.96 (0.93-0.99) 8 (0-44) 0.017
rs823098 chr1:205670726 NUCKS1 [-11221bp] A vs. G All: C 15 108,990 0.017 (A) 0.2 (A) 0.79 (0.72-0.87) 7 (0-43) 7.57e-07
rs11240554 chr1:205671644 NUCKS1 [-10303bp] T vs. C All: C 15 108,990 0.283 (T) 0.425 (T) 0.91 (0.88-0.95) 6 (0-57) 6.40e-07
rs1772140 chr1:205672482 NUCKS1 [-9465bp] A vs. G All: C 15 108,990 0.0 (A) 0.2 (A) 0.79 (0.72-0.87) 4 (0-56) 6.83e-07
rs72750964 chr1:205675240 NUCKS1 [-6707bp] C vs. T All: C 15 108,990 0.425 (C) - 0.95 (0.92-0.98) 14 (0-52) 0.001
rs112215351 chr1:205675429 NUCKS1 [-6518bp] T vs. C All: C 15 108,990 - - 1.10 (1.05-1.14) 0 (0-45) 1.94e-05
rs11580015 chr1:205676088 NUCKS1 [-5859bp] G vs. C All: C 15 108,990 0.45 (G) - 0.95 (0.92-0.98) 15 (0-52) 0.001
rs12748961 chr1:205676263 NUCKS1 [-5684bp] C vs. T All: C 15 108,990 0.033 (C) 0.375 (C) 1.15 (1.09-1.20) 14 (0-52) 3.50e-08
rs3747973 chr1:205677148 NUCKS1 [-4799bp] A vs. G All: C 15 108,990 0.383 (A) 0.35 (G) 0.89 (0.86-0.92) 38 (0-66) 1.69e-12
rs3805 chr1:205683355 NUCKS1 G vs. T All: C 15 108,990 0.017 (G) 0.383 (G) 1.15 (1.09-1.21) 0 (0-44) 1.19e-06
rs10900522 chr1:205684067 NUCKS1 C vs. T All: C 14 102,085 0.283 (C) 0.442 (C) 0.93 (0.89-0.96) 18 (0-56) 1.93e-04
rs823093 chr1:205689227 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 3 (0-55) 2.22e-06
rs823094 chr1:205689807 NUCKS1 T vs. G All: C 15 108,990 0.475 (T) - 0.94 (0.91-0.97) 20 (0-57) 8.43e-05
rs1935025 chr1:205692084 NUCKS1 A vs. C All: C 15 108,990 0.3 (A) 0.442 (A) 0.93 (0.89-0.96) 33 (0-64) 4.58e-05
rs16856215 chr1:205693136 NUCKS1 G vs. T All: C 12 96,250 - - 0.70 (0.50-0.97) 0 (0-44) 0.030
rs823108 chr1:205693601 NUCKS1 T vs. C All: C 15 108,990 0.0 (T) 0.167 (T) 0.80 (0.73-0.88) 0 (0-53) 2.70e-06
rs10494873 chr1:205694363 NUCKS1 G vs. C All: C 12 96,250 - - 0.67 (0.48-0.94) 0 (0-44) 0.020
rs3761919 chr1:205694720 NUCKS1 A vs. G All: C 15 108,990 0.3 (A) 0.442 (A) 0.93 (0.89-0.96) 31 (0-63) 2.98e-05
rs1772146 chr1:205696521 NUCKS1 T vs. G All: C 15 108,990 - 0.158 (G) 1.25 (1.14-1.37) 3 (0-55) 2.36e-06
rs1772147 chr1:205696671 NUCKS1 G vs. A All: C 15 108,990 0.017 (G) 0.175 (G) 0.80 (0.73-0.88) 3 (0-55) 2.69e-06
rs1620334 chr1:205697845 NUCKS1 C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 3 (0-55) 2.41e-06
rs7513645 chr1:205698026 NUCKS1 A vs. G All: C 15 108,990 0.292 (A) 0.442 (A) 0.93 (0.89-0.96) 30 (0-62) 2.82e-05
rs823109 chr1:205700762 NUCKS1 A vs. G All: C 15 108,990 0.0 (A) - 0.82 (0.75-0.90) 0 (0-53) 1.32e-05
rs823111 chr1:205701870 NUCKS1 C vs. T All: C 15 108,990 - - 0.94 (0.91-0.97) 18 (0-55) 3.15e-04
rs823112 chr1:205708624 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.158 (G) 0.80 (0.73-0.88) 1 (0-54) 2.15e-06
rs11240559 chr1:205709621 NUCKS1 G vs. T All: C 15 108,990 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 2.89e-05
rs11240561 chr1:205712957 NUCKS1 G vs. T All: C 15 108,990 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 3.30e-05
rs823128 chr1:205713378 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 0 (0-53) 2.73e-06
rs823129 chr1:205713799 NUCKS1 T vs. C All: C 15 108,990 0.033 (T) 0.183 (T) 0.83 (0.75-0.90) 15 (0-53) 3.18e-05
rs823131 chr1:205714437 NUCKS1 A vs. G All: C 14 103,470 0.033 (A) 0.158 (A) 0.78 (0.70-0.87) 0 (0-54) 3.62e-06
rs12046305 chr1:205714478 NUCKS1 A vs. G All: C 15 108,990 0.292 (A) 0.442 (A) 0.93 (0.89-0.96) 29 (0-62) 3.22e-05
rs4951261 chr1:205717823 NUCKS1 C vs. A All: C 15 108,990 0.417 (C) 0.442 (C) 0.91 (0.88-0.94) 36 (0-65) 9.73e-09
rs12047038 chr1:205718468 NUCKS1 G vs. A All: C 15 108,990 0.275 (G) 0.467 (G) 0.93 (0.89-0.96) 30 (0-62) 3.50e-05
rs823114 chr1:205719532 NUCKS1 [+128bp] G vs. A All: C 15 108,990 0.442 (G) 0.375 (A) 0.89 (0.86-0.92) 56 (22-75) 1.78e-13
rs865402 chr1:205719857 NUCKS1 [+453bp] T vs. A All: C 15 108,990 - 0.175 (A) 1.25 (1.14-1.37) 0 (0-53) 1.67e-06
rs823115 chr1:205720078 NUCKS1 [+674bp] G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 0 (0-54) 1.62e-06
rs12564209 chr1:205720212 NUCKS1 [+808bp] G vs. C All: C 15 108,990 0.033 (G) 0.383 (G) 1.15 (1.09-1.20) 8 (0-45) 3.15e-08
rs11240565 chr1:205722958 NUCKS1 [+3554bp] T vs. C All: C 15 108,990 0.425 (T) 0.433 (T) 0.91 (0.88-0.94) 37 (0-66) 5.77e-09
rs823118 chr1:205723572 NUCKS1 [+4168bp] C vs. T All: C 21 120,238 0.45 (C) 0.417 (T) 0.89 (0.87-0.92) 41 (0-65) 1.96e-16
rs860311 chr1:205723619 NUCKS1 [+4215bp] A vs. C All: C 15 108,990 0.017 (A) 0.175 (A) 0.84 (0.77-0.90) 24 (0-59) 5.01e-06
rs823120 chr1:205724050 NUCKS1 [+4646bp] C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 1 (0-54) 1.60e-06