Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (PROGENI-GenePD) C UKPDSBB CL 828 (40%) 852 (60%) 62 (11) - - - 55 (13) - 9,762

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17544947 chr17:42918966 HIGD1B [-4755bp] G vs. T All: C 15 108,990 0.242 (G) - 1.08 (1.04-1.11) 0 (-) 7.83e-05
rs73984100 chr17:42929985 EFTUD2 T vs. G All: C 15 108,990 0.267 (T) - 1.08 (1.04-1.12) 0 (-) 4.58e-05
rs75193889 chr17:43060768 C1QL1 [+15329bp] G vs. T All: C 15 108,990 0.033 (G) - 0.81 (0.75-0.87) 0 (0-42) 5.85e-08
rs4986167 chr17:43202492 PLCD3 G vs. A All: C 15 108,990 - - 0.99 (0.95-1.02) 27 (0-61) 0.409
rs77403959 chr17:43208068 PLCD3 T vs. C All: C 15 108,990 0.042 (T) - 0.82 (0.75-0.89) 0 (0-43) 2.92e-06
rs1053578 chr17:43221285 ACBD4 C vs. T All: C 15 108,990 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
rs11079501 chr17:43349882 SPATA32 [+10403bp] T vs. C All: C 12 96,250 - 0.125 (C) 0.82 (0.69-0.96) 0 (-) 0.017
rs2074289 chr17:43364914 SPATA32 [+25435bp] A vs. G All: C 13 100,199 - 0.125 (G) 0.83 (0.74-0.94) 0 (-) 0.003
rs7222094 chr17:43367653 SPATA32 [+28174bp] C vs. T All: C 15 108,990 0.408 (C) 0.117 (T) 0.94 (0.91-0.97) 0 (0-46) 4.90e-05
rs721579 chr17:43370481 SPATA32 [+31002bp] T vs. C All: C 15 108,990 0.225 (T) 0.392 (C) 0.90 (0.86-0.93) 0 (0-41) 3.11e-09
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] T vs. C All: C 15 108,990 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
rs7221403 chr17:43380666 RNA5SP443 [-24066bp] C vs. A All: C 15 108,990 0.417 (C) - 0.93 (0.90-0.96) 0 (0-31) 4.45e-06
rs9908330 chr17:43383100 RNA5SP443 [-21632bp] G vs. A All: C 15 108,990 0.417 (G) 0.233 (A) 0.92 (0.90-0.95) 0 (0-33) 9.64e-07
rs4792847 chr17:43383484 RNA5SP443 [-21248bp] A vs. G All: C 15 108,990 0.417 (A) 0.125 (G) 0.93 (0.90-0.96) 0 (0-38) 7.71e-06
rs1476532 chr17:43383596 RNA5SP443 [-21136bp] G vs. A All: C 15 108,990 0.417 (G) 0.233 (A) 0.91 (0.88-0.94) 0 (0-40) 8.19e-08
rs7214514 chr17:43387104 RNA5SP443 [-17628bp] T vs. G All: C 15 108,990 0.275 (T) 0.317 (G) 0.90 (0.87-0.93) 0 (0-38) 1.12e-09
rs80000929 chr17:43390121 RNA5SP443 [-14611bp] G vs. A All: C 12 96,250 - 0.1 (A) 0.81 (0.69-0.95) 0 (-) 0.010
rs74996617 chr17:43390343 RNA5SP443 [-14389bp] G vs. A All: C 12 96,250 - 0.117 (A) 0.81 (0.69-0.95) 0 (-) 0.009
rs79760062 chr17:43390763 RNA5SP443 [-13969bp] A vs. G All: C 12 96,250 - 0.108 (G) 0.81 (0.69-0.95) 0 (-) 0.009
rs4792849 chr17:43395178 RNA5SP443 [-9554bp] A vs. G All: C 15 108,990 0.225 (A) 0.383 (G) 0.90 (0.86-0.93) 0 (0-32) 2.02e-09
rs117642368 chr17:43399058 RNA5SP443 [-5674bp] C vs. G All: C 15 108,990 0.067 (C) - 0.77 (0.73-0.82) 0 (0-47) 3.08e-16
rs4328483 chr17:43401540 RNA5SP443 [-3192bp] T vs. G All: C 15 108,990 0.367 (T) 0.342 (G) 0.92 (0.89-0.95) 0 (0-25) 3.14e-07
rs4792814 chr17:43403005 RNA5SP443 [-1727bp] T vs. C All: C 15 108,990 0.358 (T) 0.342 (C) 0.92 (0.89-0.95) 0 (0-22) 5.90e-07
rs4792850 chr17:43403777 RNA5SP443 [-955bp] A vs. C All: C 15 108,990 0.358 (A) 0.35 (C) 0.92 (0.89-0.95) 0 (0-22) 6.03e-07
rs17686238 chr17:43417273 RNA5SP443 [+12410bp] T vs. G All: C 14 103,235 0.067 (T) - 0.76 (0.71-0.81) 0 (0-52) 1.32e-17
rs10853050 chr17:43445792 ARHGAP27 [-25483bp] A vs. G All: C 14 103,235 0.242 (A) 0.383 (G) 0.90 (0.86-0.93) 18 (0-56) 2.06e-08
rs9303471 chr17:43456342 ARHGAP27 [-14933bp] A vs. C All: C 14 103,235 0.242 (A) 0.408 (C) 0.90 (0.86-0.93) 26 (0-61) 2.75e-09
rs11650773 chr17:43456676 ARHGAP27 [-14599bp] T vs. C All: C 14 103,235 0.358 (T) 0.392 (C) 0.93 (0.90-0.97) 22 (0-58) 4.28e-05
rs61572747 chr17:43460891 ARHGAP27 [-10384bp] G vs. A All: C 14 103,235 0.2 (G) 0.058 (G) 0.82 (0.78-0.85) 28 (0-62) 3.80e-19
rs8327 chr17:43472507 ARHGAP27 G vs. A All: C 13 99,286 0.242 (G) 0.367 (G) 1.12 (1.08-1.17) 0 (0-46) 3.46e-09
rs1230100 chr17:43480848 ARHGAP27 C vs. G All: C 14 103,235 0.442 (C) 0.483 (G) 0.89 (0.86-0.92) 0 (0-8) 1.81e-12
rs2102989 chr17:43492416 ARHGAP27 G vs. A All: C 14 103,235 - - 0.89 (0.86-0.92) 0 (0-3) 1.40e-12
rs1230076 chr17:43495660 ARHGAP27 C vs. T All: C 14 103,235 - - 0.88 (0.85-0.91) 0 (-) 8.67e-13
rs1230077 chr17:43496218 ARHGAP27 G vs. A All: C 14 103,235 0.408 (G) 0.492 (A) 0.88 (0.85-0.91) 0 (0-15) 1.81e-13
rs62064646 chr17:43500587 ARHGAP27 A vs. G All: C 14 103,235 0.15 (A) - 0.76 (0.73-0.80) 0 (0-52) 1.60e-33
rs1230083 chr17:43500837 ARHGAP27 G vs. A All: C 14 103,235 0.425 (G) 0.475 (A) 0.88 (0.85-0.91) 0 (-) 3.50e-13
rs55914643 chr17:43502012 ARHGAP27 C vs. T All: C 14 103,235 0.15 (C) - 0.77 (0.73-0.80) 0 (0-53) 4.26e-33
rs35626715 chr17:43502241 ARHGAP27 C vs. T All: C 14 103,235 0.15 (C) - 0.76 (0.73-0.80) 0 (0-51) 4.02e-33
rs1230086 chr17:43503283 ARHGAP27 C vs. T All: C 14 103,235 0.433 (C) 0.483 (T) 0.88 (0.85-0.91) 0 (0-1) 3.90e-13
rs1230087 chr17:43503947 ARHGAP27 C vs. T All: C 14 103,235 - - 0.88 (0.85-0.91) 0 (0-1) 3.32e-13
rs62065376 chr17:43521161 PLEKHM1 C vs. G All: C 14 103,235 - - 1.36 (1.30-1.44) 0 (0-55) 1.43e-33
rs62065377 chr17:43521193 PLEKHM1 A vs. G All: C 14 103,235 - - 1.38 (1.31-1.45) 1 (0-56) 2.49e-33
rs56278545 chr17:43530550 PLEKHM1 G vs. A All: C 14 103,235 - - 0.84 (0.81-0.88) 0 (0-13) 5.78e-14
rs8075717 chr17:43534322 PLEKHM1 T vs. C All: C 14 103,235 - - 0.84 (0.80-0.88) 0 (0-14) 5.90e-14
rs3418 chr17:43723462 CRHR1 T vs. C All: C 14 103,235 0.217 (T) - 0.77 (0.74-0.80) 0 (0-50) 9.39e-37
rs241038 chr17:43730598 CRHR1 G vs. A All: C 14 103,235 - - 1.30 (1.24-1.35) 0 (0-51) 8.82e-37
rs241036 chr17:43731719 CRHR1 C vs. A All: C 14 103,235 0.217 (C) - 0.77 (0.74-0.80) 0 (0-51) 9.02e-37
rs241035 chr17:43731896 CRHR1 T vs. C All: C 14 103,235 0.242 (T) - 0.77 (0.74-0.80) 0 (0-51) 8.72e-37
rs3843738 chr17:43739194 CRHR1 A vs. G All: C 13 97,715 0.492 (A) 0.242 (A) 0.82 (0.78-0.85) 0 (0-56) 6.10e-19
rs62053943 chr17:43744203 CRHR1 T vs. C All: C 14 103,235 0.167 (T) - 0.72 (0.69-0.76) 0 (0-51) 8.49e-37