Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (PROGENI-GenePD) C UKPDSBB CL 828 (40%) 852 (60%) 62 (11) - - - 55 (13) - 9,762

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3785883 chr17:44054433 MAPT A vs. G All: C 14 103,235 0.192 (A) 0.175 (A) 1.09 (1.05-1.14) 19 (0-57) 1.41e-05
rs2435206 chr17:44058111 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.217 (T) 1.08 (1.05-1.12) 0 (0-8) 5.74e-06
rs3785885 chr17:44058640 MAPT A vs. G All: C 14 103,235 0.258 (A) 0.142 (A) 1.09 (1.05-1.13) 19 (0-57) 6.29e-06
rs2435207 chr17:44058928 MAPT A vs. G All: C 14 103,235 0.392 (A) 0.25 (A) 1.08 (1.05-1.12) 0 (0-10) 4.99e-06
rs7209922 chr17:44059408 MAPT G vs. A All: C 14 103,235 0.25 (G) - 1.08 (1.04-1.12) 24 (0-60) 2.87e-05
rs2435209 chr17:44061893 MAPT T vs. G All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.21e-05
rs2435210 chr17:44061894 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.24e-05
rs2435211 chr17:44063244 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.05e-05
rs1529536 chr17:44064795 MAPT A vs. G All: C 12 37,071 0.058 (A) - 0.49 (0.43-0.56) 0 (0-44) 1.20e-24
rs1529537 chr17:44064799 MAPT C vs. T All: C 9 24,132 0.017 (C) - 0.46 (0.38-0.55) 0 (0-62) 1.61e-16
rs8079215 chr17:44064851 MAPT C vs. T All: C 14 103,235 0.258 (C) 0.167 (C) 1.08 (1.04-1.12) 19 (0-57) 1.69e-05
rs713522 chr17:44065263 MAPT C vs. T All: C 14 103,235 0.375 (C) 0.4 (T) 0.88 (0.85-0.90) 0 (0-53) 9.62e-16
rs11656151 chr17:44068492 MAPT G vs. A All: C 14 103,235 0.233 (G) - 1.07 (1.03-1.11) 5 (0-57) 3.83e-04
rs2471737 chr17:44070583 MAPT G vs. A All: C 14 103,235 0.367 (G) 0.425 (G) 0.88 (0.85-0.91) 0 (0-54) 1.78e-15
rs12051901 chr17:44074586 MAPT A vs. G All: C 14 103,235 0.258 (A) 0.142 (A) 1.08 (1.05-1.12) 22 (0-59) 1.24e-05
rs2435201 chr17:44078982 MAPT T vs. A All: C 14 103,235 0.333 (T) 0.467 (T) 0.87 (0.84-0.90) 1 (0-55) 2.46e-16
rs8067056 chr17:44083948 MAPT C vs. T All: C 14 103,235 0.35 (C) 0.375 (C) 0.86 (0.83-0.89) 0 (0-45) 1.71e-17
rs62062279 chr17:44093964 MAPT T vs. C All: C 14 103,235 - - 1.59 (1.48-1.71) 0 (0-54) 2.31e-35
rs7521 chr17:44105395 MAPT A vs. G All: C 14 103,235 0.417 (A) 0.117 (A) 1.12 (1.08-1.15) 0 (0-37) 1.60e-11
rs8064986 chr17:44119367 KANSL1 G vs. A All: C 14 103,235 - - 0.90 (0.87-0.93) 0 (0-35) 3.74e-11
rs56406462 chr17:44119474 KANSL1 T vs. C All: C 14 103,235 - - 1.50 (1.40-1.59) 0 (0-50) 3.29e-35
rs72836318 chr17:44121579 KANSL1 C vs. T All: C 14 103,235 0.283 (C) - 1.10 (1.05-1.14) 0 (0-49) 6.00e-06
rs72628323 chr17:44171207 KANSL1 A vs. G All: C 13 97,715 0.108 (A) 0.367 (A) 1.10 (1.04-1.15) 0 (0-31) 3.20e-04
rs74521229 chr17:44173215 KANSL1 C vs. T All: C 13 97,715 0.242 (C) - 1.15 (1.09-1.21) 0 (0-53) 5.63e-07
rs8065825 chr17:44175489 KANSL1 A vs. G All: C 14 103,235 - - 0.90 (0.87-0.93) 0 (0-30) 2.98e-09
rs11652924 chr17:44182267 KANSL1 C vs. T All: C 14 103,235 - - 0.88 (0.85-0.92) 0 (0-42) 1.49e-12
rs78381082 chr17:44182983 KANSL1 G vs. A All: C 13 97,715 0.2 (G) - 0.63 (0.58-0.68) 10 (0-49) 3.06e-34
rs9904766 chr17:44186952 KANSL1 T vs. C All: C 14 103,235 0.417 (T) 0.117 (T) 1.13 (1.09-1.17) 0 (0-40) 6.37e-12
rs7225002 chr17:44189067 KANSL1 G vs. A All: C 14 103,235 0.467 (G) 0.467 (A) 0.86 (0.83-0.88) 23 (0-59) 2.21e-20
rs56807059 chr17:44189270 KANSL1 C vs. A All: C 14 103,235 0.4 (C) 0.1 (C) 1.11 (1.07-1.15) 0 (0-33) 1.87e-09
rs11653367 chr17:44191483 KANSL1 G vs. A All: C 13 97,715 0.375 (G) 0.008 (G) 1.12 (1.07-1.16) 0 (0-43) 7.47e-08
rs34517924 chr17:44193713 KANSL1 G vs. A All: C 13 97,715 - - 0.90 (0.86-0.95) 0 (0-26) 9.66e-05
rs2552462 (chr17:44708736) chr17:44491152 intergenic A vs. T All: C 10 31,764 - - 1.55 (1.39-1.73) 35 (0-69) 2.78e-15
rs199460 chr17:44764775 NSF A vs. C All: C 15 108,990 - - 1.34 (1.26-1.43) 35 (0-65) 7.10e-21
rs62074079 (chr17:44764981) chr17:44547284 LRRC37A2 [-41593bp] C vs. G All: C 15 108,990 - - 1.46 (1.37-1.56) 11 (0-48) 1.61e-33
rs143572569 chr17:44776843 NSF T vs. C All: C 13 42,826 - - 1.62 (1.47-1.78) 10 (0-49) 7.38e-23
rs200403 chr17:44781143 NSF A vs. C All: C 15 108,990 - - 1.27 (1.21-1.32) 26 (0-60) 2.49e-27
rs116988420 chr17:44782279 NSF C vs. G All: C 15 108,990 - - 1.46 (1.37-1.55) 6 (0-57) 1.40e-34
rs199451 chr17:44801784 NSF A vs. G All: C 15 108,990 0.208 (A) - 0.78 (0.75-0.81) 10 (0-48) 5.80e-34
rs199447 chr17:44812188 NSF T vs. C All: C 15 108,990 0.208 (T) - 0.78 (0.75-0.81) 12 (0-50) 5.75e-34
rs9912530 chr17:44836302 NSF [+1472bp] T vs. C All: C 15 108,990 0.275 (T) 0.275 (C) 0.81 (0.78-0.84) 23 (0-58) 1.42e-26
rs199530 chr17:44836653 NSF [+1823bp] G vs. A All: C 15 108,990 0.242 (G) 0.275 (A) 0.80 (0.77-0.83) 26 (0-60) 3.86e-29
rs199528 chr17:44843136 WNT3 T vs. C All: C 15 108,990 0.192 (T) - 0.77 (0.74-0.81) 19 (0-56) 2.37e-34
rs199526 chr17:44847707 WNT3 C vs. G All: C 15 108,990 0.192 (C) 0.292 (G) 0.78 (0.75-0.82) 20 (0-56) 9.25e-32
rs199525 chr17:44847834 WNT3 G vs. T All: C 15 108,990 0.2 (G) - 0.77 (0.74-0.81) 19 (0-56) 2.78e-34
rs199518 chr17:44854580 WNT3 A vs. C All: C 15 108,990 0.217 (A) 0.325 (C) 0.79 (0.76-0.82) 24 (0-59) 1.74e-28
rs199517 chr17:44854587 WNT3 A vs. G All: C 15 108,990 0.233 (A) 0.283 (G) 0.79 (0.76-0.82) 23 (0-59) 1.42e-28
rs199510 chr17:44857929 WNT3 C vs. A All: C 15 108,990 - - 1.30 (1.24-1.35) 24 (0-59) 1.69e-32
rs199508 chr17:44858838 WNT3 C vs. G All: C 15 108,990 0.225 (C) 0.425 (G) 0.79 (0.76-0.83) 27 (0-61) 1.31e-29
rs199498 chr17:44865603 WNT3 C vs. T All: C 15 108,990 0.192 (C) 0.442 (T) 0.77 (0.74-0.81) 6 (0-56) 3.49e-29