Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (CHARGE-FHS) C UKPDSBB PO 60 (42%) 3889 (55%) 76 (11) - - - 64 (12) - 9,223

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3805 chr1:205683355 NUCKS1 G vs. T All: C 15 108,990 0.017 (G) 0.383 (G) 1.15 (1.09-1.21) 0 (0-44) 1.19e-06
rs10900522 chr1:205684067 NUCKS1 C vs. T All: C 14 102,085 0.283 (C) 0.442 (C) 0.93 (0.89-0.96) 18 (0-56) 1.93e-04
rs823093 chr1:205689227 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 3 (0-55) 2.22e-06
rs823094 chr1:205689807 NUCKS1 T vs. G All: C 15 108,990 0.475 (T) - 0.94 (0.91-0.97) 20 (0-57) 8.43e-05
rs1935025 chr1:205692084 NUCKS1 A vs. C All: C 15 108,990 0.3 (A) 0.442 (A) 0.93 (0.89-0.96) 33 (0-64) 4.58e-05
rs823108 chr1:205693601 NUCKS1 T vs. C All: C 15 108,990 0.0 (T) 0.167 (T) 0.80 (0.73-0.88) 0 (0-53) 2.70e-06
rs3761919 chr1:205694720 NUCKS1 A vs. G All: C 15 108,990 0.3 (A) 0.442 (A) 0.93 (0.89-0.96) 31 (0-63) 2.98e-05
rs1772146 chr1:205696521 NUCKS1 T vs. G All: C 15 108,990 - 0.158 (G) 1.25 (1.14-1.37) 3 (0-55) 2.36e-06
rs1772147 chr1:205696671 NUCKS1 G vs. A All: C 15 108,990 0.017 (G) 0.175 (G) 0.80 (0.73-0.88) 3 (0-55) 2.69e-06
rs1620334 chr1:205697845 NUCKS1 C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 3 (0-55) 2.41e-06
rs7513645 chr1:205698026 NUCKS1 A vs. G All: C 15 108,990 0.292 (A) 0.442 (A) 0.93 (0.89-0.96) 30 (0-62) 2.82e-05
rs823109 chr1:205700762 NUCKS1 A vs. G All: C 15 108,990 0.0 (A) - 0.82 (0.75-0.90) 0 (0-53) 1.32e-05
rs823111 chr1:205701870 NUCKS1 C vs. T All: C 15 108,990 - - 0.94 (0.91-0.97) 18 (0-55) 3.15e-04
rs823112 chr1:205708624 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.158 (G) 0.80 (0.73-0.88) 1 (0-54) 2.15e-06
rs11240559 chr1:205709621 NUCKS1 G vs. T All: C 15 108,990 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 2.89e-05
rs11240561 chr1:205712957 NUCKS1 G vs. T All: C 15 108,990 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 3.30e-05
rs823128 chr1:205713378 NUCKS1 G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 0 (0-53) 2.73e-06
rs823129 chr1:205713799 NUCKS1 T vs. C All: C 15 108,990 0.033 (T) 0.183 (T) 0.83 (0.75-0.90) 15 (0-53) 3.18e-05
rs823131 chr1:205714437 NUCKS1 A vs. G All: C 14 103,470 0.033 (A) 0.158 (A) 0.78 (0.70-0.87) 0 (0-54) 3.62e-06
rs12046305 chr1:205714478 NUCKS1 A vs. G All: C 15 108,990 0.292 (A) 0.442 (A) 0.93 (0.89-0.96) 29 (0-62) 3.22e-05
rs4951261 chr1:205717823 NUCKS1 C vs. A All: C 15 108,990 0.417 (C) 0.442 (C) 0.91 (0.88-0.94) 36 (0-65) 9.73e-09
rs12047038 chr1:205718468 NUCKS1 G vs. A All: C 15 108,990 0.275 (G) 0.467 (G) 0.93 (0.89-0.96) 30 (0-62) 3.50e-05
rs823114 chr1:205719532 NUCKS1 [+128bp] G vs. A All: C 15 108,990 0.442 (G) 0.375 (A) 0.89 (0.86-0.92) 56 (22-75) 1.78e-13
rs865402 chr1:205719857 NUCKS1 [+453bp] T vs. A All: C 15 108,990 - 0.175 (A) 1.25 (1.14-1.37) 0 (0-53) 1.67e-06
rs823115 chr1:205720078 NUCKS1 [+674bp] G vs. A All: C 15 108,990 0.0 (G) 0.175 (G) 0.80 (0.73-0.88) 0 (0-54) 1.62e-06
rs12564209 chr1:205720212 NUCKS1 [+808bp] G vs. C All: C 15 108,990 0.033 (G) 0.383 (G) 1.15 (1.09-1.20) 8 (0-45) 3.15e-08
rs11240565 chr1:205722958 NUCKS1 [+3554bp] T vs. C All: C 15 108,990 0.425 (T) 0.433 (T) 0.91 (0.88-0.94) 37 (0-66) 5.77e-09
rs823118 chr1:205723572 NUCKS1 [+4168bp] C vs. T All: C 21 120,238 0.45 (C) 0.417 (T) 0.89 (0.87-0.92) 41 (0-65) 1.96e-16
rs860311 chr1:205723619 NUCKS1 [+4215bp] A vs. C All: C 15 108,990 0.017 (A) 0.175 (A) 0.84 (0.77-0.90) 24 (0-59) 5.01e-06
rs823120 chr1:205724050 NUCKS1 [+4646bp] C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 1 (0-54) 1.60e-06
rs823123 chr1:205725346 NUCKS1 [+5942bp] C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 1 (0-54) 1.62e-06
rs823124 chr1:205726336 NUCKS1 [+6932bp] C vs. T All: C 15 108,990 0.0 (C) 0.175 (C) 0.80 (0.73-0.88) 1 (0-54) 1.67e-06
rs1626710 chr1:205727466 NUCKS1 [+8062bp] C vs. A All: C 15 108,990 0.008 (C) 0.158 (C) 0.85 (0.78-0.93) 2 (0-54) 2.20e-04
rs1772150 chr1:205727468 NUCKS1 [+8064bp] G vs. A All: C 15 108,990 0.008 (G) 0.183 (G) 0.85 (0.78-0.93) 1 (0-54) 2.27e-04
rs56276813 chr1:205730573 RAB7L1 [-6541bp] T vs. G All: C 15 108,990 0.3 (T) 0.425 (T) 0.93 (0.89-0.96) 37 (0-66) 3.36e-05
rs823145 chr1:205732512 RAB7L1 [-4602bp] C vs. T All: C 15 108,990 - - 1.26 (1.15-1.38) 0 (0-43) 6.81e-07
rs823147 chr1:205733138 RAB7L1 [-3976bp] A vs. G All: C 15 108,990 0.0 (A) 0.167 (A) 0.79 (0.72-0.87) 9 (0-46) 1.51e-06
rs1832775 chr1:205734032 RAB7L1 [-3082bp] T vs. C All: C 15 108,990 0.292 (T) 0.442 (T) 0.93 (0.89-0.96) 36 (0-66) 3.23e-05
rs823148 chr1:205735121 RAB7L1 [-1993bp] A vs. G All: C 15 108,990 0.017 (A) 0.167 (A) 0.79 (0.72-0.87) 13 (0-51) 1.24e-06
rs823149 chr1:205735229 RAB7L1 [-1885bp] A vs. C All: C 15 108,990 0.067 (A) 0.158 (A) 0.85 (0.80-0.91) 35 (0-65) 3.35e-07
rs823150 chr1:205735486 RAB7L1 [-1628bp] C vs. T All: C 15 108,990 0.008 (C) 0.158 (C) 0.80 (0.72-0.88) 0 (0-53) 4.87e-06
rs823151 chr1:205735517 RAB7L1 [-1597bp] C vs. T All: C 15 108,990 - - 1.26 (1.14-1.38) 2 (0-55) 1.69e-06
rs2014202 chr1:205735612 RAB7L1 [-1502bp] G vs. A All: C 15 108,990 - - 1.09 (1.05-1.13) 19 (0-56) 1.51e-06
rs7522056 chr1:205735891 RAB7L1 [-1223bp] A vs. G All: C 15 108,990 0.317 (A) 0.442 (A) 0.92 (0.89-0.95) 19 (0-56) 1.41e-06
rs823153 chr1:205736563 RAB7L1 [-551bp] A vs. G All: C 15 108,990 0.0 (A) 0.158 (A) 0.80 (0.73-0.87) 2 (0-55) 1.69e-06
rs1618936 chr1:205736663 RAB7L1 [-451bp] A vs. C All: C 15 108,990 - 0.15 (C) 1.27 (1.15-1.40) 10 (0-48) 2.03e-06
rs844005 chr1:205737450 RAB7L1 T vs. C All: C 15 108,990 0.0 (T) 0.167 (T) 0.80 (0.73-0.87) 3 (0-55) 1.68e-06
rs11557080 chr1:205737739 RAB7L1 G vs. A All: C 15 108,990 - - 0.87 (0.83-0.91) 42 (0-68) 7.64e-09
rs823132 chr1:205737764 RAB7L1 T vs. C All: C 15 108,990 - - 1.25 (1.14-1.37) 0 (0-53) 2.25e-06
rs823133 chr1:205737781 RAB7L1 C vs. T All: C 15 108,990 - - 1.24 (1.13-1.37) 0 (0-53) 4.22e-06