Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2069213 chr2:32743084 BIRC6 C vs. T All: C 15 108,990 0.317 (C) 0.408 (T) 0.93 (0.90-0.96) 26 (0-60) 3.73e-05
rs2249109 chr2:32750879 BIRC6 G vs. A All: C 15 108,990 0.3 (G) 0.442 (A) 0.93 (0.90-0.96) 0 (0-53) 3.59e-05
rs2710627 chr2:32758627 BIRC6 A vs. G All: C 15 108,990 0.325 (A) 0.45 (G) 0.93 (0.90-0.96) 8 (0-45) 1.96e-05
rs6729952 chr2:32764922 BIRC6 T vs. C All: C 15 108,990 0.342 (T) 0.425 (C) 0.94 (0.91-0.97) 42 (0-68) 8.00e-05
rs2710629 chr2:32765844 BIRC6 C vs. T All: C 15 108,990 0.358 (C) 0.433 (T) 0.94 (0.91-0.97) 38 (0-66) 2.60e-04
rs2754513 chr2:32782763 BIRC6 G vs. A All: C 15 108,990 0.325 (G) 0.45 (A) 0.94 (0.91-0.97) 0 (0-53) 1.10e-04
rs2710606 chr2:32811909 BIRC6 A vs. G All: C 15 108,990 0.3 (A) 0.458 (G) 0.93 (0.90-0.96) 14 (0-52) 2.54e-05
rs1901355 chr2:32835664 BIRC6 G vs. A All: C 15 108,990 0.292 (G) 0.4 (A) 0.94 (0.90-0.97) 17 (0-55) 2.59e-04
rs1980318 chr2:36157168 intergenic A vs. G All: C 15 108,990 0.425 (A) 0.35 (A) 0.93 (0.90-0.96) 0 (0-44) 1.26e-05
rs1554610 chr2:36157513 intergenic T vs. G All: C 15 108,990 0.417 (T) 0.35 (T) 0.93 (0.90-0.96) 0 (0-46) 3.07e-05
rs1916837 chr2:36158068 intergenic T vs. C All: C 15 108,990 0.167 (T) 0.15 (T) 1.08 (1.04-1.13) 0 (0-52) 5.38e-05
rs12472723 chr2:36159859 intergenic G vs. A All: C 15 108,990 0.175 (G) 0.158 (G) 1.09 (1.04-1.13) 1 (0-54) 4.65e-05
rs2968617 chr2:36160085 intergenic A vs. G All: C 15 108,990 0.408 (A) 0.342 (A) 0.93 (0.90-0.96) 0 (0-44) 1.23e-05
rs2968618 chr2:36160142 intergenic A vs. G All: C 15 108,990 0.417 (A) 0.342 (A) 0.93 (0.89-0.96) 0 (0-46) 9.49e-06
rs2968619 chr2:36160334 intergenic T vs. C All: C 15 108,990 - - 1.08 (1.04-1.11) 0 (0-42) 1.24e-05
rs2968621 chr2:36160660 intergenic A vs. G All: C 15 108,990 0.417 (A) 0.35 (A) 0.93 (0.90-0.96) 0 (0-43) 1.13e-05
rs2968622 chr2:36161469 intergenic C vs. A All: C 15 108,990 0.408 (C) 0.35 (C) 0.93 (0.90-0.96) 0 (0-42) 9.26e-06
rs2949028 chr2:36161553 intergenic G vs. T All: C 15 108,990 0.408 (G) 0.342 (G) 0.93 (0.90-0.96) 0 (0-42) 1.17e-05
rs2949027 chr2:36162074 intergenic G vs. A All: C 15 108,990 0.417 (G) 0.317 (G) 0.93 (0.90-0.96) 0 (0-42) 1.16e-05
rs2949026 chr2:36162135 intergenic G vs. A All: C 15 108,990 0.417 (G) 0.325 (G) 0.93 (0.90-0.96) 0 (0-43) 1.25e-05
rs2968624 chr2:36162477 intergenic A vs. G All: C 15 108,990 0.458 (A) 0.433 (G) 0.93 (0.90-0.96) 0 (0-19) 2.75e-05
rs1880256 chr2:36162761 intergenic A vs. C All: C 15 108,990 0.417 (A) 0.325 (A) 0.93 (0.90-0.96) 0 (0-42) 1.19e-05
rs1404050 chr2:36164064 intergenic T vs. C All: C 15 108,990 0.433 (T) 0.325 (T) 0.94 (0.90-0.97) 0 (0-43) 7.18e-05
rs2949025 chr2:36164415 intergenic G vs. A All: C 15 108,990 0.433 (G) 0.317 (G) 0.94 (0.91-0.97) 0 (0-42) 8.50e-05
rs2949085 chr2:36164771 intergenic G vs. A All: C 15 108,990 0.433 (G) 0.317 (G) 0.94 (0.90-0.97) 0 (0-46) 9.09e-05
rs2949084 chr2:36165078 intergenic T vs. C All: C 15 108,990 0.433 (T) 0.317 (T) 0.94 (0.91-0.97) 0 (0-42) 7.49e-05
rs2949083 chr2:36165125 intergenic G vs. A All: C 15 108,990 0.433 (G) 0.317 (G) 0.94 (0.91-0.97) 0 (0-42) 7.47e-05
rs2949082 chr2:36165777 intergenic C vs. T All: C 15 108,990 0.442 (C) 0.442 (T) 0.94 (0.91-0.97) 0 (0-42) 7.63e-05
rs2968629 chr2:36170939 intergenic C vs. T All: C 15 108,990 0.475 (C) 0.325 (C) 0.94 (0.91-0.97) 0 (0-6) 1.36e-04
rs1357663 chr2:36172491 intergenic T vs. C All: C 15 108,990 0.433 (T) 0.317 (T) 0.94 (0.91-0.97) 0 (0-38) 8.04e-05
rs1357665 chr2:36174133 intergenic C vs. T All: C 15 108,990 0.433 (C) 0.317 (C) 0.94 (0.90-0.97) 0 (0-38) 6.79e-05
rs1357666 chr2:36174271 intergenic A vs. G All: C 15 108,990 0.442 (A) 0.317 (A) 0.94 (0.91-0.97) 0 (0-38) 8.65e-05
rs1510737 chr2:36175047 intergenic A vs. G All: C 15 108,990 0.433 (A) 0.317 (A) 0.94 (0.91-0.97) 0 (0-35) 7.17e-05
rs9973610 chr2:36249338 intergenic G vs. T All: C 15 108,990 0.233 (G) 0.242 (G) 0.92 (0.88-0.95) 0 (0-49) 2.90e-05
rs9973611 chr2:36249340 intergenic T vs. G All: C 15 108,990 - 0.242 (G) 1.09 (1.05-1.14) 0 (0-46) 1.79e-05
rs7573821 chr2:36250292 intergenic C vs. T All: C 15 108,990 0.258 (C) 0.267 (C) 0.91 (0.88-0.95) 0 (0-40) 2.03e-05
rs4670524 chr2:36250672 intergenic G vs. T All: C 15 108,990 0.275 (G) 0.242 (G) 0.92 (0.88-0.95) 0 (0-47) 2.00e-05
rs962378 chr2:36252307 intergenic G vs. T All: C 15 108,990 0.267 (G) 0.242 (G) 0.92 (0.88-0.95) 0 (0-46) 1.91e-05
rs996671 chr2:36253380 intergenic G vs. A All: C 15 108,990 0.275 (G) 0.25 (G) 0.92 (0.88-0.95) 0 (0-46) 1.66e-05
rs10495861 chr2:36254823 intergenic C vs. T All: C 15 108,990 0.267 (C) 0.267 (C) 0.92 (0.88-0.95) 0 (0-45) 1.86e-05
rs12987749 chr2:36255356 intergenic C vs. T All: C 15 108,990 0.267 (C) 0.275 (C) 0.92 (0.88-0.96) 0 (0-46) 2.16e-05
rs10201830 chr2:36259078 intergenic C vs. T All: C 15 108,990 0.25 (C) 0.267 (C) 0.92 (0.88-0.96) 0 (0-53) 5.57e-05
rs150832125 chr2:36901991 VIT [-21842bp] T vs. C All: C 14 105,041 - - 0.80 (0.72-0.89) 0 (0-45) 7.33e-05
rs141865127 chr2:36905821 VIT [-18012bp] A vs. G All: C 14 105,041 - - 0.81 (0.72-0.90) 0 (0-34) 1.56e-04
rs11709811 chr2:37092003 STRN A vs. G All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-50) 6.65e-08
rs6491355 chr2:76933953 LRRTM4 [-40892bp] G vs. T All: C 15 108,990 - - 1.09 (1.05-1.14) 47 (3-71) 2.56e-05
rs12474195 chr2:95595941 intergenic C vs. T All: C 14 102,085 0.233 (C) 0.433 (C) 0.92 (0.88-0.96) 0 (0-31) 7.16e-05
rs7599246 chr2:95604114 intergenic G vs. A All: C 15 108,990 0.233 (G) 0.45 (G) 0.93 (0.90-0.97) 0 (0-47) 5.02e-04
rs62155152 chr2:102302650 MAP4K4 [-10662bp] C vs. T All: C 15 108,990 0.375 (C) 0.492 (C) 1.08 (1.04-1.11) 29 (0-62) 1.32e-05
rs6543086 chr2:102304852 MAP4K4 [-8460bp] G vs. A All: C 15 108,990 0.375 (G) 0.5 (G) 1.08 (1.04-1.11) 31 (0-63) 1.37e-05