Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs606101 chr2:135284307 TMEM163 A vs. G All: C 15 108,990 0.442 (A) 0.0 (A) 1.08 (1.04-1.11) 52 (13-73) 1.47e-05
rs512375 chr2:135285279 TMEM163 G vs. T All: C 15 108,990 0.442 (G) 0.242 (G) 1.08 (1.04-1.11) 47 (3-71) 5.81e-06
rs578384 chr2:135287914 TMEM163 T vs. C All: C 15 108,990 0.442 (T) 0.0 (T) 1.08 (1.05-1.12) 51 (11-73) 1.64e-06
rs655472 chr2:135290221 TMEM163 T vs. C All: C 15 108,990 0.475 (T) 0.183 (T) 1.09 (1.05-1.12) 42 (0-69) 1.14e-06
rs669759 chr2:135291135 TMEM163 C vs. T All: C 15 108,990 0.433 (C) 0.0 (C) 1.09 (1.06-1.13) 52 (13-73) 1.48e-07
rs569350 chr2:135293494 TMEM163 G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 43 (0-69) 4.21e-06
rs606076 chr2:135294082 TMEM163 T vs. C All: C 15 108,990 0.458 (T) 0.183 (T) 1.09 (1.05-1.12) 43 (0-69) 1.04e-06
rs621341 chr2:135295180 TMEM163 T vs. C All: C 15 108,990 0.433 (T) 0.0 (T) 1.09 (1.06-1.13) 52 (13-73) 1.32e-07
rs613828 chr2:135298713 TMEM163 G vs. T All: C 15 108,990 0.458 (G) 0.183 (G) 1.08 (1.05-1.12) 48 (5-71) 2.47e-06
rs614356 chr2:135298862 TMEM163 T vs. C All: C 15 108,990 0.458 (T) 0.183 (T) 1.08 (1.05-1.12) 48 (5-71) 2.48e-06
rs643796 chr2:135300858 TMEM163 A vs. G All: C 15 108,990 0.433 (A) 0.192 (A) 1.08 (1.05-1.12) 47 (4-71) 2.30e-06
rs487404 chr2:135300861 TMEM163 A vs. G All: C 15 108,990 0.433 (A) 0.2 (A) 1.08 (1.05-1.12) 47 (4-71) 2.28e-06
rs842362 chr2:135341120 TMEM163 A vs. G All: C 15 108,990 0.283 (A) 0.492 (G) 0.93 (0.90-0.96) 0 (0-51) 1.77e-05
rs859767 chr2:135341200 TMEM163 G vs. A All: C 15 108,990 0.308 (G) 0.492 (A) 0.92 (0.89-0.95) 0 (0-42) 1.48e-06
rs859766 chr2:135342254 TMEM163 T vs. C All: C 15 108,990 0.283 (T) 0.483 (T) 0.93 (0.90-0.96) 0 (0-49) 1.35e-05
rs842348 chr2:135342391 TMEM163 G vs. T All: C 15 108,990 0.283 (G) 0.483 (G) 0.93 (0.90-0.96) 0 (0-49) 1.31e-05
rs842349 chr2:135342452 TMEM163 T vs. G All: C 15 108,990 0.292 (T) 0.475 (T) 0.92 (0.89-0.95) 0 (0-43) 8.48e-07
rs842351 chr2:135343037 TMEM163 G vs. A All: C 15 108,990 0.325 (G) 0.5 (G) 0.92 (0.89-0.95) 0 (0-44) 5.94e-07
rs842352 chr2:135343204 TMEM163 A vs. C All: C 15 108,990 - - 1.10 (1.05-1.15) 15 (0-52) 5.36e-05
rs842353 chr2:135343290 TMEM163 A vs. C All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-26) 4.02e-07
rs842357 chr2:135345059 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-42) 2.63e-06
rs842358 chr2:135345109 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.217 (G) 0.91 (0.88-0.95) 0 (0-41) 1.53e-07
rs842360 chr2:135347885 TMEM163 C vs. T All: C 15 108,990 0.317 (C) 0.217 (T) 0.92 (0.89-0.95) 0 (0-42) 1.80e-07
rs2280219 chr2:135351764 TMEM163 A vs. G All: C 15 108,990 0.3 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-43) 3.28e-06
rs13410301 chr2:135353183 TMEM163 C vs. T All: C 15 108,990 - 0.117 (T) 0.92 (0.89-0.95) 0 (0-24) 4.16e-07
rs7584925 chr2:135353513 TMEM163 G vs. A All: C 15 108,990 - - 1.08 (1.05-1.12) 0 (0-40) 3.10e-06
rs7588102 chr2:135353842 TMEM163 C vs. T All: C 15 108,990 - - 1.09 (1.05-1.12) 0 (0-46) 2.26e-06
rs1818613 chr2:135356285 TMEM163 T vs. G All: C 15 108,990 - - 1.08 (1.05-1.12) 0 (0-43) 3.28e-06
rs1818614 chr2:135356351 TMEM163 A vs. G All: C 15 108,990 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-46) 2.90e-06
rs9287437 chr2:135357502 TMEM163 C vs. T All: C 15 108,990 0.308 (C) 0.233 (T) 0.92 (0.89-0.95) 0 (0-42) 1.57e-06
rs7570717 chr2:135361035 TMEM163 G vs. A All: C 15 108,990 0.308 (G) 0.217 (A) 0.92 (0.89-0.95) 0 (0-43) 1.86e-06
rs10170773 chr2:135362505 TMEM163 T vs. C All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-27) 1.56e-07
rs10203582 chr2:135362839 TMEM163 C vs. A All: C 15 108,990 0.317 (C) 0.217 (A) 0.92 (0.89-0.95) 0 (0-42) 1.99e-06
rs6750788 chr2:135362981 TMEM163 A vs. G All: C 15 108,990 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.96e-06
rs7602801 chr2:135363870 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.85e-06
rs35215000 chr2:135367656 TMEM163 C vs. A All: C 15 108,990 0.4 (C) 0.15 (A) 0.92 (0.89-0.95) 0 (0-26) 2.78e-07
rs1516991 chr2:135370052 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.225 (A) 0.92 (0.89-0.95) 0 (0-44) 2.21e-06
rs4954154 chr2:135370656 TMEM163 G vs. A All: C 15 108,990 0.325 (G) 0.233 (A) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs2176341 chr2:135371421 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.225 (G) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs10171371 chr2:135372159 TMEM163 C vs. T All: C 15 108,990 0.392 (C) 0.017 (T) 0.91 (0.89-0.95) 0 (0-24) 8.12e-08
rs13432068 chr2:135382914 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.217 (A) 0.92 (0.89-0.96) 0 (0-44) 3.05e-06
rs4954155 chr2:135383504 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-44) 2.74e-06
rs17789633 chr2:135386474 TMEM163 A vs. C All: C 15 108,990 0.4 (A) - 0.92 (0.89-0.95) 0 (0-31) 1.09e-07
rs11682346 chr2:135388261 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.217 (A) 0.93 (0.90-0.96) 0 (0-43) 3.90e-06
rs6759065 chr2:135389197 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.225 (G) 0.92 (0.89-0.96) 0 (0-44) 2.90e-06
rs35599954 chr2:135392481 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-43) 4.24e-06
rs11684785 chr2:135393110 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.233 (A) 0.92 (0.89-0.96) 0 (0-45) 2.68e-06
rs13399952 chr2:135394404 TMEM163 A vs. G All: C 15 108,990 0.4 (A) 0.133 (G) 0.92 (0.89-0.95) 0 (0-30) 2.50e-07
rs6430528 chr2:135395348 TMEM163 A vs. G All: C 15 108,990 0.325 (A) 0.217 (G) 0.93 (0.90-0.96) 0 (0-43) 5.65e-06
rs4954156 chr2:135395863 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.95) 0 (0-43) 1.75e-06