Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1772156 chr1:205752894 SLC41A1 [-5327bp] T vs. C All: C 15 108,990 0.183 (T) 0.383 (C) 0.91 (0.87-0.94) 18 (0-55) 2.17e-07
rs885224 chr1:205753097 SLC41A1 [-5124bp] A vs. G All: C 15 108,990 0.208 (A) 0.383 (G) 0.90 (0.87-0.94) 41 (0-68) 7.64e-08
rs1775158 chr1:205753675 SLC41A1 [-4546bp] A vs. G All: C 15 108,990 - - 1.11 (1.07-1.15) 37 (0-66) 8.87e-08
rs1772157 chr1:205753808 SLC41A1 [-4413bp] C vs. T All: C 15 108,990 - - 1.10 (1.06-1.15) 17 (0-54) 2.27e-06
rs1775159 chr1:205753812 SLC41A1 [-4409bp] G vs. A All: C 15 108,990 - - 1.11 (1.06-1.15) 43 (0-69) 4.95e-07
rs1772158 chr1:205753820 SLC41A1 [-4401bp] C vs. T All: C 15 108,990 - - 1.11 (1.06-1.15) 42 (0-68) 5.43e-07
rs12565968 chr1:205755046 SLC41A1 [-3175bp] G vs. A All: C 15 108,990 0.192 (G) 0.383 (A) 0.91 (0.88-0.95) 34 (0-64) 2.53e-06
rs12565321 chr1:205755144 SLC41A1 [-3077bp] C vs. T All: C 15 108,990 - - 1.09 (1.05-1.13) 41 (0-68) 9.57e-06
rs12567894 chr1:205755151 SLC41A1 [-3070bp] T vs. C All: C 15 108,990 - - 1.09 (1.05-1.13) 42 (0-68) 1.22e-05
rs11240567 chr1:205755265 SLC41A1 [-2956bp] C vs. T All: C 15 108,990 - 0.35 (C) 1.10 (1.05-1.14) 31 (0-63) 2.41e-06
rs1775144 chr1:205756012 SLC41A1 [-2209bp] G vs. A All: C 15 108,990 0.0 (G) 0.158 (G) 0.79 (0.72-0.87) 4 (0-55) 9.61e-07
rs1775145 chr1:205756143 SLC41A1 [-2078bp] C vs. A All: C 15 108,990 0.208 (C) 0.392 (A) 0.91 (0.88-0.95) 51 (12-73) 8.66e-07
rs1775146 chr1:205756168 SLC41A1 [-2053bp] A vs. G All: C 15 108,990 0.2 (A) 0.392 (G) 0.92 (0.88-0.95) 33 (0-64) 3.57e-06
rs12740609 chr1:205756535 SLC41A1 [-1686bp] G vs. A All: C 15 108,990 - 0.167 (A) 1.29 (1.17-1.42) 24 (0-59) 3.95e-07
rs7536285 chr1:205757569 SLC41A1 [-652bp] T vs. C All: C 15 108,990 - - 1.09 (1.05-1.14) 35 (0-65) 2.89e-06
rs7513115 chr1:205757692 SLC41A1 [-529bp] A vs. G All: C 15 108,990 - - 1.09 (1.05-1.14) 34 (0-65) 2.77e-06
rs1775148 chr1:205757824 SLC41A1 [-397bp] T vs. C All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-53) 7.16e-08
rs1341249 chr1:205759876 SLC41A1 T vs. C All: C 15 108,990 0.167 (T) 0.392 (C) 0.91 (0.87-0.95) 3 (0-55) 1.01e-05
rs708726 chr1:205762139 SLC41A1 T vs. G All: C 15 108,990 0.192 (T) 0.4 (G) 0.91 (0.88-0.95) 21 (0-57) 1.34e-06
rs823155 chr1:205762946 SLC41A1 T vs. C All: C 15 108,990 0.192 (T) 0.392 (C) 0.91 (0.88-0.95) 22 (0-58) 1.34e-06
rs823156 chr1:205764640 SLC41A1 G vs. A All: C 15 108,990 0.142 (G) 0.258 (G) 0.91 (0.87-0.95) 29 (0-62) 8.37e-06
rs823065 chr1:205771061 SLC41A1 T vs. G All: C 15 108,990 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-38) 1.03e-05
rs823066 chr1:205771173 SLC41A1 A vs. G All: C 15 108,990 0.05 (A) 0.258 (A) 0.86 (0.80-0.92) 0 (0-39) 1.16e-05
rs823067 chr1:205771704 SLC41A1 C vs. T All: C 15 108,990 - - 1.16 (1.08-1.24) 0 (0-44) 2.81e-05
rs823068 chr1:205771720 SLC41A1 C vs. T All: C 15 108,990 - - 1.16 (1.09-1.25) 0 (0-36) 1.81e-05
rs823069 chr1:205771801 SLC41A1 A vs. G All: C 15 108,990 - - 1.10 (1.06-1.15) 44 (0-70) 4.53e-06
rs823070 chr1:205772370 SLC41A1 T vs. C All: C 15 108,990 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.24e-05
rs823071 chr1:205773379 SLC41A1 G vs. T All: C 15 108,990 0.05 (G) 0.258 (G) 0.86 (0.80-0.92) 0 (0-35) 9.96e-06
rs708729 chr1:205773461 SLC41A1 C vs. T All: C 15 108,990 0.15 (C) 0.258 (C) 0.91 (0.87-0.94) 47 (3-71) 3.00e-06
rs823072 chr1:205773652 SLC41A1 C vs. T All: C 15 108,990 0.167 (C) 0.258 (C) 0.91 (0.88-0.95) 46 (1-70) 7.44e-06
rs823073 chr1:205774156 SLC41A1 T vs. C All: C 15 108,990 0.042 (T) 0.258 (T) 0.85 (0.79-0.92) 0 (0-43) 1.31e-05
rs823076 chr1:205775810 SLC41A1 T vs. C All: C 15 108,990 0.05 (T) 0.267 (T) 0.85 (0.79-0.92) 0 (0-21) 6.98e-05
rs823077 chr1:205776109 SLC41A1 T vs. C All: C 15 108,990 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.42e-05
rs823078 chr1:205776458 SLC41A1 T vs. C All: C 15 108,990 0.058 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.42e-05
rs823079 chr1:205777159 SLC41A1 C vs. T All: C 15 108,990 - - 1.17 (1.09-1.25) 0 (0-40) 1.42e-05
rs708730 chr1:205777780 SLC41A1 G vs. A All: C 15 108,990 0.117 (G) 0.258 (G) 0.91 (0.87-0.95) 55 (20-75) 9.00e-06
rs844004 chr1:205792680 PM20D1 [-4470bp] T vs. C All: C 15 108,990 0.05 (T) 0.258 (T) 0.87 (0.81-0.93) 0 (0-45) 8.80e-05
rs823085 chr1:205798033 PM20D1 G vs. A All: C 15 108,990 0.058 (G) 0.258 (G) 0.87 (0.81-0.93) 0 (0-38) 6.10e-05
rs11240572 chr1:205808013 PM20D1 C vs. A All: C 15 108,990 - 0.208 (A) 1.22 (1.12-1.34) 11 (0-49) 1.75e-05
rs7355095 chr1:221829733 DUSP10 [-45033bp] C vs. A All: C 15 108,990 0.108 (C) 0.183 (C) 0.89 (0.84-0.94) 0 (0-28) 5.36e-05
rs7355053 chr1:221829784 DUSP10 [-44982bp] A vs. C All: C 15 108,990 0.108 (A) 0.192 (A) 0.89 (0.85-0.95) 0 (0-26) 6.77e-05
rs12039242 chr1:226905927 ITPKB G vs. A All: C 15 108,990 - - 0.90 (0.86-0.94) 3 (0-55) 1.28e-05
rs708769 chr1:226906961 ITPKB C vs. T All: C 15 108,990 0.408 (C) 0.392 (C) 0.93 (0.90-0.96) 5 (0-56) 3.10e-06
rs1289274 chr1:226909364 ITPKB T vs. C All: C 15 108,990 - - 1.08 (1.04-1.11) 0 (0-54) 1.01e-05
rs3768408 chr1:226910340 ITPKB T vs. C All: C 15 108,990 0.15 (T) 0.417 (T) 1.11 (1.06-1.16) 3 (0-55) 1.46e-05
rs708770 chr1:226912135 ITPKB A vs. G All: C 15 108,990 0.408 (A) 0.392 (A) 0.93 (0.90-0.96) 11 (0-49) 3.90e-06
rs3768411 chr1:226912196 ITPKB A vs. C All: C 15 108,990 0.15 (A) 0.308 (A) 1.11 (1.06-1.16) 5 (0-56) 1.72e-05
rs708772 chr1:226912891 ITPKB C vs. T All: C 15 108,990 0.408 (C) 0.392 (C) 0.93 (0.90-0.96) 12 (0-50) 4.80e-06
rs4653767 chr1:226916078 ITPKB C vs. T All: C 15 108,990 0.283 (C) 0.325 (C) 0.92 (0.89-0.95) 10 (0-47) 3.43e-06
rs10495249 chr1:226919119 ITPKB G vs. A All: C 15 108,990 0.283 (G) 0.325 (G) 0.92 (0.89-0.95) 5 (0-56) 3.68e-06