Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Netherlands (IPDGC) C UKPDSBB CL, PO 744 (36%) 2019 (64%) 56 (12) - - - 56 (6) - 9,595

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs842351 chr2:135343037 TMEM163 G vs. A All: C 15 108,990 0.325 (G) 0.5 (G) 0.92 (0.89-0.95) 0 (0-44) 5.94e-07
rs842352 chr2:135343204 TMEM163 A vs. C All: C 15 108,990 - - 1.10 (1.05-1.15) 15 (0-52) 5.36e-05
rs842353 chr2:135343290 TMEM163 A vs. C All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-26) 4.02e-07
rs842357 chr2:135345059 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-42) 2.63e-06
rs842358 chr2:135345109 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.217 (G) 0.91 (0.88-0.95) 0 (0-41) 1.53e-07
rs842360 chr2:135347885 TMEM163 C vs. T All: C 15 108,990 0.317 (C) 0.217 (T) 0.92 (0.89-0.95) 0 (0-42) 1.80e-07
rs2280219 chr2:135351764 TMEM163 A vs. G All: C 15 108,990 0.3 (A) 0.217 (G) 0.92 (0.89-0.95) 0 (0-43) 3.28e-06
rs13410301 chr2:135353183 TMEM163 C vs. T All: C 15 108,990 - 0.117 (T) 0.92 (0.89-0.95) 0 (0-24) 4.16e-07
rs7584925 chr2:135353513 TMEM163 G vs. A All: C 15 108,990 - - 1.08 (1.05-1.12) 0 (0-40) 3.10e-06
rs7588102 chr2:135353842 TMEM163 C vs. T All: C 15 108,990 - - 1.09 (1.05-1.12) 0 (0-46) 2.26e-06
rs1818613 chr2:135356285 TMEM163 T vs. G All: C 15 108,990 - - 1.08 (1.05-1.12) 0 (0-43) 3.28e-06
rs1818614 chr2:135356351 TMEM163 A vs. G All: C 15 108,990 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-46) 2.90e-06
rs9287437 chr2:135357502 TMEM163 C vs. T All: C 15 108,990 0.308 (C) 0.233 (T) 0.92 (0.89-0.95) 0 (0-42) 1.57e-06
rs7570717 chr2:135361035 TMEM163 G vs. A All: C 15 108,990 0.308 (G) 0.217 (A) 0.92 (0.89-0.95) 0 (0-43) 1.86e-06
rs10170773 chr2:135362505 TMEM163 T vs. C All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-27) 1.56e-07
rs10203582 chr2:135362839 TMEM163 C vs. A All: C 15 108,990 0.317 (C) 0.217 (A) 0.92 (0.89-0.95) 0 (0-42) 1.99e-06
rs6750788 chr2:135362981 TMEM163 A vs. G All: C 15 108,990 0.308 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.96e-06
rs7602801 chr2:135363870 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.233 (G) 0.92 (0.89-0.95) 0 (0-41) 1.85e-06
rs35215000 chr2:135367656 TMEM163 C vs. A All: C 15 108,990 0.4 (C) 0.15 (A) 0.92 (0.89-0.95) 0 (0-26) 2.78e-07
rs1516991 chr2:135370052 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.225 (A) 0.92 (0.89-0.95) 0 (0-44) 2.21e-06
rs4954154 chr2:135370656 TMEM163 G vs. A All: C 15 108,990 0.325 (G) 0.233 (A) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs2176341 chr2:135371421 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.225 (G) 0.92 (0.89-0.95) 0 (0-44) 2.33e-06
rs10171371 chr2:135372159 TMEM163 C vs. T All: C 15 108,990 0.392 (C) 0.017 (T) 0.91 (0.89-0.95) 0 (0-24) 8.12e-08
rs13432068 chr2:135382914 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.217 (A) 0.92 (0.89-0.96) 0 (0-44) 3.05e-06
rs4954155 chr2:135383504 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-44) 2.74e-06
rs17789633 chr2:135386474 TMEM163 A vs. C All: C 15 108,990 0.4 (A) - 0.92 (0.89-0.95) 0 (0-31) 1.09e-07
rs11682346 chr2:135388261 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.217 (A) 0.93 (0.90-0.96) 0 (0-43) 3.90e-06
rs6759065 chr2:135389197 TMEM163 A vs. G All: C 15 108,990 0.317 (A) 0.225 (G) 0.92 (0.89-0.96) 0 (0-44) 2.90e-06
rs35599954 chr2:135392481 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.96) 0 (0-43) 4.24e-06
rs11684785 chr2:135393110 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.233 (A) 0.92 (0.89-0.96) 0 (0-45) 2.68e-06
rs13399952 chr2:135394404 TMEM163 A vs. G All: C 15 108,990 0.4 (A) 0.133 (G) 0.92 (0.89-0.95) 0 (0-30) 2.50e-07
rs6430528 chr2:135395348 TMEM163 A vs. G All: C 15 108,990 0.325 (A) 0.217 (G) 0.93 (0.90-0.96) 0 (0-43) 5.65e-06
rs4954156 chr2:135395863 TMEM163 T vs. C All: C 15 108,990 0.317 (T) 0.233 (C) 0.92 (0.89-0.95) 0 (0-43) 1.75e-06
rs10928507 chr2:135396631 TMEM163 A vs. G All: C 15 108,990 0.392 (A) 0.15 (G) 0.92 (0.89-0.95) 0 (0-31) 1.89e-07
rs10803548 chr2:135396738 TMEM163 C vs. A All: C 15 108,990 0.317 (C) 0.217 (A) 0.92 (0.89-0.96) 0 (0-43) 2.52e-06
rs6705916 chr2:135397569 TMEM163 C vs. T All: C 15 108,990 0.392 (C) 0.15 (T) 0.92 (0.89-0.95) 0 (0-34) 1.48e-07
rs6729090 chr2:135401878 TMEM163 G vs. A All: C 15 108,990 0.317 (G) 0.233 (A) 0.93 (0.90-0.96) 0 (0-43) 3.92e-06
rs10193171 chr2:135403199 TMEM163 A vs. G All: C 15 108,990 0.392 (A) 0.15 (G) 0.92 (0.89-0.95) 0 (0-31) 1.27e-07
rs1568121 chr2:135406606 TMEM163 G vs. A All: C 15 108,990 0.392 (G) 0.15 (A) 0.92 (0.89-0.95) 0 (0-32) 1.34e-07
rs1568120 chr2:135406890 TMEM163 A vs. G All: C 15 108,990 0.392 (A) 0.158 (G) 0.92 (0.89-0.95) 0 (0-32) 1.30e-07
rs6724774 chr2:135407285 TMEM163 C vs. T All: C 15 108,990 0.4 (C) 0.15 (T) 0.92 (0.89-0.95) 0 (0-33) 2.76e-07
rs6724777 chr2:135407292 TMEM163 C vs. T All: C 15 108,990 0.392 (C) 0.142 (T) 0.92 (0.89-0.95) 0 (0-33) 2.75e-07
rs6724866 chr2:135407310 TMEM163 C vs. A All: C 15 108,990 0.4 (C) 0.15 (A) 0.92 (0.89-0.95) 0 (0-32) 3.46e-07
rs6752634 chr2:135407355 TMEM163 G vs. A All: C 15 108,990 0.408 (G) 0.15 (A) 0.92 (0.89-0.95) 0 (0-32) 3.54e-07
rs6742638 chr2:135407360 TMEM163 T vs. G All: C 15 108,990 0.392 (T) 0.133 (G) 0.92 (0.89-0.95) 0 (0-30) 6.30e-07
rs6739706 chr2:135407409 TMEM163 A vs. C All: C 15 108,990 0.4 (A) 0.15 (C) 0.92 (0.89-0.95) 0 (0-33) 1.33e-07
rs12691869 chr2:135407641 TMEM163 T vs. C All: C 15 108,990 0.392 (T) 0.15 (C) 0.92 (0.89-0.95) 0 (0-27) 3.30e-07
rs10210052 chr2:135417350 TMEM163 C vs. T All: C 15 108,990 0.392 (C) 0.125 (T) 0.92 (0.89-0.95) 0 (0-28) 9.86e-08
rs7560738 chr2:135419163 TMEM163 A vs. G All: C 15 108,990 0.108 (A) 0.233 (A) 0.92 (0.87-0.97) 0 (0-42) 9.04e-04
rs7564273 chr2:135419794 TMEM163 C vs. T All: C 15 108,990 - - 1.10 (1.05-1.15) 0 (0-0) 7.10e-05