Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1374292 chr2:135654168 ACMSD A vs. G All: C 15 108,990 0.392 (A) 0.058 (G) 0.92 (0.89-0.96) 23 (0-58) 2.82e-06
rs1374291 chr2:135654338 ACMSD C vs. T All: C 15 108,990 0.383 (C) 0.075 (T) 0.92 (0.89-0.95) 25 (0-59) 1.76e-06
rs10176573 chr2:135657471 ACMSD A vs. C All: C 15 108,990 0.375 (A) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 1.97e-06
rs62168871 chr2:135661678 ACMSD [+2074bp] G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 25 (0-59) 3.76e-06
rs62168872 chr2:135661747 ACMSD [+2143bp] T vs. C All: C 15 108,990 0.392 (T) 0.058 (C) 0.92 (0.89-0.95) 25 (0-60) 2.08e-06
rs4954196 chr2:135662016 ACMSD [+2412bp] G vs. A All: C 15 108,990 0.392 (G) - 0.92 (0.89-0.95) 25 (0-60) 1.97e-06
rs4954197 chr2:135662244 ACMSD [+2640bp] A vs. G All: C 15 108,990 0.392 (A) 0.075 (G) 0.92 (0.89-0.95) 22 (0-58) 1.72e-06
rs12469411 chr2:135664556 ACMSD [+4952bp] T vs. C All: C 15 108,990 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.99e-06
rs10928523 chr2:135665461 ACMSD [+5857bp] T vs. C All: C 15 108,990 0.4 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 2.21e-06
rs6733130 chr2:135666553 ACMSD [+6949bp] C vs. A All: C 15 108,990 0.383 (C) 0.075 (A) 0.92 (0.89-0.95) 26 (0-60) 2.08e-06
rs1374288 chr2:135667053 ACMSD [+7449bp] T vs. C All: C 15 108,990 0.392 (T) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 2.52e-06
rs766271 chr2:135667131 ACMSD [+7527bp] T vs. C All: C 15 108,990 0.392 (T) 0.367 (C) 0.93 (0.90-0.96) 26 (0-60) 3.50e-06
rs1374287 chr2:135667201 ACMSD [+7597bp] T vs. C All: C 15 108,990 0.392 (T) 0.058 (C) 0.92 (0.89-0.95) 25 (0-60) 2.19e-06
rs2322251 chr2:135671302 CCNT2 [-4503bp] T vs. C All: C 15 108,990 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.92e-06
rs62168891 chr2:135672187 CCNT2 [-3618bp] T vs. C All: C 15 108,990 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-59) 2.10e-06
rs6738563 chr2:135689188 CCNT2 T vs. G All: C 15 108,990 0.442 (T) - 0.90 (0.87-0.93) 27 (0-61) 8.60e-09
rs1374289 chr2:135694379 CCNT2 T vs. C All: C 15 108,990 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 29 (0-62) 1.49e-06
rs4953938 chr2:135694848 CCNT2 A vs. G All: C 15 108,990 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 30 (0-62) 1.49e-06
rs10187990 chr2:135697557 CCNT2 G vs. A All: C 15 108,990 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 29 (0-62) 1.44e-06
rs10166142 chr2:135710322 CCNT2 G vs. A All: C 15 108,990 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.28e-06
rs3814355 chr2:135711516 CCNT2 T vs. C All: C 15 108,990 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 28 (0-61) 1.22e-06
rs3814354 chr2:135711657 CCNT2 A vs. G All: C 15 108,990 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs3769023 chr2:135713703 CCNT2 A vs. G All: C 15 108,990 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs1947112 chr2:135715957 CCNT2 G vs. A All: C 15 108,990 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.48e-06
rs62168897 chr2:135717997 CCNT2 [+1085bp] T vs. C All: C 15 108,990 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 27 (0-61) 1.16e-06
rs56271357 chr2:135720715 MAP3K19 [-1346bp] T vs. C All: C 15 108,990 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 1.09e-06
rs1592 chr2:135722143 MAP3K19 C vs. A All: C 15 108,990 0.383 (C) 0.383 (A) 0.92 (0.89-0.95) 29 (0-62) 1.64e-06
rs1530559 chr2:135755629 MAP3K19 G vs. A All: C 15 108,990 0.392 (G) 0.033 (A) 0.90 (0.86-0.93) 27 (0-61) 1.70e-08
rs6733547 chr2:135758231 MAP3K19 T vs. G All: C 15 108,990 0.117 (T) 0.217 (T) 0.89 (0.84-0.93) 0 (0-53) 1.79e-06
rs72976313 chr2:135766890 MAP3K19 A vs. G All: C 15 108,990 0.083 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-50) 8.67e-06
rs77922444 chr2:135772049 MAP3K19 T vs. C All: C 15 108,990 0.075 (T) 0.183 (T) 0.89 (0.84-0.95) 2 (0-55) 1.70e-04
rs4494812 chr2:135773420 MAP3K19 A vs. G All: C 15 108,990 - - 1.14 (1.08-1.21) 17 (0-54) 2.19e-06
rs4346445 chr2:135773446 MAP3K19 C vs. A All: C 15 108,990 0.1 (C) 0.217 (C) 0.87 (0.82-0.92) 13 (0-51) 8.58e-07
rs4482542 chr2:135773449 MAP3K19 A vs. G All: C 15 108,990 0.075 (A) 0.183 (A) 0.86 (0.80-0.93) 3 (0-55) 9.55e-05
rs4640444 chr2:135773617 MAP3K19 C vs. T All: C 15 108,990 0.125 (C) 0.217 (C) 0.89 (0.84-0.93) 0 (0-52) 6.39e-07
rs11903663 chr2:135774681 MAP3K19 G vs. A All: C 15 108,990 0.125 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-51) 7.33e-07
rs61663334 chr2:135776430 MAP3K19 G vs. A All: C 15 108,990 0.133 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-51) 7.25e-07
rs7593284 chr2:135778708 MAP3K19 T vs. C All: C 15 108,990 0.083 (T) 0.217 (T) 0.88 (0.83-0.93) 0 (0-46) 3.88e-06
rs13408997 chr2:135779588 MAP3K19 A vs. G All: C 15 108,990 0.05 (A) 0.217 (A) 0.88 (0.83-0.93) 0 (0-45) 3.89e-06
rs4954212 chr2:135780168 MAP3K19 G vs. A All: C 15 108,990 0.125 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-50) 4.93e-07
rs16831256 chr2:135781035 MAP3K19 T vs. C All: C 15 108,990 0.083 (T) 0.183 (T) 0.89 (0.84-0.94) 0 (0-54) 1.20e-04
rs11889843 chr2:135781522 MAP3K19 A vs. G All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-52) 5.07e-07
rs11900832 chr2:135781635 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.93) 0 (0-47) 4.40e-07
rs10928529 chr2:135782456 MAP3K19 A vs. G All: C 15 108,990 0.117 (A) 0.2 (A) 0.88 (0.84-0.92) 0 (0-50) 2.27e-07
rs11903529 chr2:135783157 MAP3K19 C vs. T All: C 15 108,990 - - 1.13 (1.08-1.19) 0 (0-49) 4.53e-07
rs11889089 chr2:135783366 MAP3K19 C vs. T All: C 15 108,990 0.117 (C) 0.217 (C) 0.86 (0.82-0.92) 0 (0-46) 5.67e-07
rs11892750 chr2:135783367 MAP3K19 A vs. G All: C 15 108,990 0.117 (A) 0.217 (A) 0.86 (0.82-0.92) 0 (0-46) 5.56e-07
rs4954213 chr2:135784227 MAP3K19 T vs. G All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.93) 0 (0-51) 1.25e-06
rs13408096 chr2:135784733 MAP3K19 T vs. G All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.93) 0 (0-49) 3.42e-07
rs13399376 chr2:135785068 MAP3K19 G vs. A All: C 15 108,990 0.1 (G) 0.217 (G) 0.88 (0.83-0.92) 0 (0-45) 1.74e-07