Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11890844 chr2:135785149 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-49) 3.30e-07
rs1551497 chr2:135787642 MAP3K19 C vs. T All: C 15 108,990 0.125 (C) 0.217 (C) 0.88 (0.84-0.93) 0 (0-49) 3.05e-07
rs6709763 chr2:135789405 MAP3K19 A vs. C All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-49) 3.08e-07
rs6737635 chr2:135789472 MAP3K19 T vs. G All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.93) 0 (0-49) 3.08e-07
rs56369660 chr2:135789682 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-49) 3.08e-07
rs60350840 chr2:135789784 MAP3K19 A vs. G All: C 15 108,990 - - 1.13 (1.08-1.19) 0 (0-49) 2.98e-07
rs62168934 chr2:135792528 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-44) 1.10e-07
rs4954214 chr2:135793565 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-48) 2.59e-07
rs4953946 chr2:135793684 MAP3K19 G vs. T All: C 15 108,990 0.1 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-48) 2.03e-07
rs11888951 chr2:135793845 MAP3K19 C vs. T All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.93) 0 (0-49) 2.89e-07
rs6760553 chr2:135794367 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-49) 2.88e-07
rs4954215 chr2:135794986 MAP3K19 A vs. G All: C 15 108,990 0.108 (A) 0.217 (A) 0.88 (0.84-0.92) 0 (0-47) 2.00e-07
rs4953947 chr2:135795040 MAP3K19 C vs. A All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-47) 1.93e-07
rs4954216 chr2:135795095 MAP3K19 A vs. G All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.92) 0 (0-45) 3.50e-07
rs4953948 chr2:135795150 MAP3K19 G vs. T All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-49) 2.12e-07
rs10167809 chr2:135795385 MAP3K19 T vs. C All: C 15 108,990 0.125 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-44) 2.04e-07
rs10167884 chr2:135795396 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-46) 1.47e-07
rs10167901 chr2:135795443 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-49) 2.09e-07
rs10182750 chr2:135795595 MAP3K19 C vs. T All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-49) 2.09e-07
rs13402112 chr2:135796000 MAP3K19 C vs. A All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-46) 1.44e-07
rs13413872 chr2:135796155 MAP3K19 T vs. G All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-48) 2.17e-07
rs79939165 chr2:135796302 MAP3K19 C vs. T All: C 15 108,990 - - 1.13 (1.06-1.20) 0 (0-54) 9.57e-05
rs13389481 chr2:135796410 MAP3K19 A vs. C All: C 15 108,990 0.1 (A) - 0.88 (0.84-0.92) 0 (0-48) 1.80e-07
rs56174523 chr2:135796965 MAP3K19 C vs. A All: C 15 108,990 0.117 (C) 0.208 (C) 0.88 (0.84-0.92) 0 (0-49) 1.99e-07
rs10186594 chr2:135797223 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-49) 1.99e-07
rs10174944 chr2:135797747 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-50) 2.44e-07
rs13409400 chr2:135798082 MAP3K19 C vs. A All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-49) 1.99e-07
rs62168941 chr2:135798758 MAP3K19 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-49) 1.98e-07
rs62168942 chr2:135799082 MAP3K19 C vs. T All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-49) 1.89e-07
rs57180797 chr2:135800085 MAP3K19 A vs. G All: C 15 108,990 - - 1.16 (1.08-1.25) 0 (0-15) 3.78e-05
rs2017831 chr2:135800601 MAP3K19 C vs. T All: C 15 108,990 - 0.208 (T) 1.14 (1.08-1.19) 0 (0-49) 1.95e-07
rs921859 chr2:135800757 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-49) 1.76e-07
rs4954217 chr2:135801228 MAP3K19 T vs. C All: C 15 108,990 0.108 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-49) 1.76e-07
rs7601683 chr2:135802020 MAP3K19 C vs. T All: C 15 108,990 - - 1.15 (1.09-1.21) 0 (0-46) 4.14e-07
rs7565268 chr2:135802028 MAP3K19 T vs. C All: C 15 108,990 - - 1.15 (1.09-1.21) 0 (0-46) 2.71e-07
rs7577258 chr2:135802148 MAP3K19 G vs. A All: C 15 108,990 - - 1.14 (1.08-1.19) 0 (0-47) 2.64e-07
rs17293519 chr2:135803766 MAP3K19 G vs. A All: C 15 108,990 0.117 (G) 0.217 (G) 0.88 (0.84-0.92) 0 (0-49) 1.66e-07
rs56903548 chr2:135812969 RAB3GAP1 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-48) 1.69e-07
rs7422031 chr2:135814716 RAB3GAP1 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-48) 1.66e-07
rs2874739 chr2:135818907 RAB3GAP1 T vs. C All: C 15 108,990 0.117 (T) 0.217 (T) 0.88 (0.84-0.92) 0 (0-48) 1.58e-07
rs10193348 chr2:135829432 RAB3GAP1 G vs. A All: C 15 108,990 0.117 (G) 0.192 (G) 0.88 (0.84-0.92) 0 (0-47) 1.58e-07
rs12328663 chr2:135832131 RAB3GAP1 C vs. T All: C 15 108,990 0.117 (C) 0.175 (C) 0.88 (0.84-0.93) 0 (0-46) 5.33e-07
rs7570971 chr2:135837906 RAB3GAP1 A vs. C All: C 14 108,544 0.267 (A) - 0.89 (0.86-0.93) 22 (0-58) 2.33e-09
rs7568525 chr2:135849613 RAB3GAP1 A vs. G All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.92) 0 (0-47) 1.67e-07
rs10208624 chr2:135853807 RAB3GAP1 T vs. C All: C 15 108,990 0.117 (T) 0.225 (T) 0.88 (0.84-0.92) 0 (0-48) 1.53e-07
rs11898045 chr2:135859923 RAB3GAP1 C vs. T All: C 15 108,990 0.117 (C) 0.217 (C) 0.88 (0.84-0.92) 0 (0-47) 1.67e-07
rs58426504 chr2:135860305 RAB3GAP1 G vs. T All: C 15 108,990 0.1 (G) 0.208 (G) 0.88 (0.84-0.92) 0 (0-47) 1.51e-07
rs77732099 chr2:135866750 RAB3GAP1 G vs. A All: C 15 108,990 0.058 (G) 0.15 (G) 0.89 (0.83-0.94) 0 (0-48) 1.84e-04
rs58697996 chr2:135871624 RAB3GAP1 A vs. G All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.92) 0 (0-47) 2.67e-07
rs4954220 chr2:135872646 RAB3GAP1 A vs. C All: C 15 108,990 0.117 (A) 0.217 (A) 0.88 (0.84-0.92) 0 (0-46) 1.69e-07