Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
23andMe.v2 (USA, Europe) C self-reported clinical diagnosis O 3261 (39%) 29499 (42%) 64 (11) - - - 49 (15) - 9,752

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT T vs. C All: C 20 114,483 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
rs8080903 chr17:43996140 MAPT T vs. C All: C 14 103,235 0.392 (T) 0.225 (C) 1.12 (1.09-1.16) 39 (0-68) 2.39e-12
rs1560313 chr17:43996561 MAPT A vs. G All: C 14 103,235 0.392 (A) 0.208 (G) 1.12 (1.09-1.16) 39 (0-68) 3.28e-12
rs9904290 chr17:44002271 MAPT A vs. G All: C 14 103,235 0.392 (A) 0.242 (G) 1.12 (1.09-1.16) 38 (0-67) 6.24e-12
rs1001945 chr17:44005821 MAPT C vs. G All: C 14 103,235 0.4 (C) 0.242 (G) 1.12 (1.08-1.15) 36 (0-66) 1.83e-11
rs8078967 chr17:44008101 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.242 (C) 1.12 (1.08-1.15) 35 (0-66) 2.30e-11
rs242557 chr17:44019712 MAPT A vs. G All: C 14 103,235 0.408 (A) 0.467 (A) 1.08 (1.04-1.12) 7 (0-58) 8.40e-06
rs62062775 chr17:44021960 MAPT A vs. G All: C 14 103,235 0.192 (A) - 1.12 (1.07-1.16) 27 (0-62) 4.08e-07
rs242562 chr17:44026739 MAPT A vs. G All: C 14 103,235 0.425 (A) 0.433 (G) 1.09 (1.05-1.12) 10 (0-48) 4.10e-06
rs878918 chr17:44031596 MAPT G vs. A All: C 14 103,235 0.283 (G) 0.15 (G) 1.11 (1.07-1.15) 45 (0-71) 1.26e-07
rs242554 chr17:44039365 MAPT C vs. T All: C 14 103,235 - - 0.90 (0.87-0.93) 14 (0-52) 4.70e-09
rs16940758 chr17:44040626 MAPT T vs. C All: C 14 103,235 0.192 (T) 0.108 (T) 1.10 (1.06-1.15) 21 (0-58) 8.99e-06
rs2664006 chr17:44041771 MAPT C vs. T All: C 14 103,235 - - 0.91 (0.88-0.94) 10 (0-48) 8.57e-09
rs62063286 chr17:44041987 MAPT T vs. C All: C 14 103,235 - - 0.92 (0.88-0.96) 17 (0-55) 6.04e-05
rs62063287 chr17:44041992 MAPT G vs. T All: C 14 103,235 - - 0.92 (0.88-0.96) 17 (0-55) 6.09e-05
rs76281607 chr17:44042782 MAPT C vs. T All: C 14 103,235 - - 0.91 (0.87-0.95) 21 (0-58) 1.04e-05
rs77169816 chr17:44042942 MAPT T vs. C All: C 14 103,235 0.183 (T) 0.175 (T) 1.10 (1.06-1.15) 17 (0-55) 7.19e-06
rs9896485 chr17:44050828 MAPT C vs. G All: C 14 103,235 0.317 (C) 0.392 (G) 1.10 (1.06-1.14) 7 (0-58) 1.53e-08
rs10514889 chr17:44051404 MAPT A vs. G All: C 14 103,235 0.317 (A) 0.475 (A) 1.10 (1.06-1.14) 7 (0-44) 1.98e-08
rs3785883 chr17:44054433 MAPT A vs. G All: C 14 103,235 0.192 (A) 0.175 (A) 1.09 (1.05-1.14) 19 (0-57) 1.41e-05
rs2435206 chr17:44058111 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.217 (T) 1.08 (1.05-1.12) 0 (0-8) 5.74e-06
rs3785885 chr17:44058640 MAPT A vs. G All: C 14 103,235 0.258 (A) 0.142 (A) 1.09 (1.05-1.13) 19 (0-57) 6.29e-06
rs2435207 chr17:44058928 MAPT A vs. G All: C 14 103,235 0.392 (A) 0.25 (A) 1.08 (1.05-1.12) 0 (0-10) 4.99e-06
rs7209922 chr17:44059408 MAPT G vs. A All: C 14 103,235 0.25 (G) - 1.08 (1.04-1.12) 24 (0-60) 2.87e-05
rs2435209 chr17:44061893 MAPT T vs. G All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.21e-05
rs2435210 chr17:44061894 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.24e-05
rs2435211 chr17:44063244 MAPT T vs. C All: C 14 103,235 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.05e-05
rs8079215 chr17:44064851 MAPT C vs. T All: C 14 103,235 0.258 (C) 0.167 (C) 1.08 (1.04-1.12) 19 (0-57) 1.69e-05
rs713522 chr17:44065263 MAPT C vs. T All: C 14 103,235 0.375 (C) 0.4 (T) 0.88 (0.85-0.90) 0 (0-53) 9.62e-16
rs11656151 chr17:44068492 MAPT G vs. A All: C 14 103,235 0.233 (G) - 1.07 (1.03-1.11) 5 (0-57) 3.83e-04
rs2471737 chr17:44070583 MAPT G vs. A All: C 14 103,235 0.367 (G) 0.425 (G) 0.88 (0.85-0.91) 0 (0-54) 1.78e-15
rs12051901 chr17:44074586 MAPT A vs. G All: C 14 103,235 0.258 (A) 0.142 (A) 1.08 (1.05-1.12) 22 (0-59) 1.24e-05
rs2435201 chr17:44078982 MAPT T vs. A All: C 14 103,235 0.333 (T) 0.467 (T) 0.87 (0.84-0.90) 1 (0-55) 2.46e-16
rs8067056 chr17:44083948 MAPT C vs. T All: C 14 103,235 0.35 (C) 0.375 (C) 0.86 (0.83-0.89) 0 (0-45) 1.71e-17
rs62062279 chr17:44093964 MAPT T vs. C All: C 14 103,235 - - 1.59 (1.48-1.71) 0 (0-54) 2.31e-35
rs7521 chr17:44105395 MAPT A vs. G All: C 14 103,235 0.417 (A) 0.117 (A) 1.12 (1.08-1.15) 0 (0-37) 1.60e-11
rs8064986 chr17:44119367 KANSL1 G vs. A All: C 14 103,235 - - 0.90 (0.87-0.93) 0 (0-35) 3.74e-11
rs56406462 chr17:44119474 KANSL1 T vs. C All: C 14 103,235 - - 1.50 (1.40-1.59) 0 (0-50) 3.29e-35
rs72836318 chr17:44121579 KANSL1 C vs. T All: C 14 103,235 0.283 (C) - 1.10 (1.05-1.14) 0 (0-49) 6.00e-06
rs72628323 chr17:44171207 KANSL1 A vs. G All: C 13 97,715 0.108 (A) 0.367 (A) 1.10 (1.04-1.15) 0 (0-31) 3.20e-04
rs74521229 chr17:44173215 KANSL1 C vs. T All: C 13 97,715 0.242 (C) - 1.15 (1.09-1.21) 0 (0-53) 5.63e-07
rs8065825 chr17:44175489 KANSL1 A vs. G All: C 14 103,235 - - 0.90 (0.87-0.93) 0 (0-30) 2.98e-09
rs11652924 chr17:44182267 KANSL1 C vs. T All: C 14 103,235 - - 0.88 (0.85-0.92) 0 (0-42) 1.49e-12
rs78381082 chr17:44182983 KANSL1 G vs. A All: C 13 97,715 0.2 (G) - 0.63 (0.58-0.68) 10 (0-49) 3.06e-34
rs9904766 chr17:44186952 KANSL1 T vs. C All: C 14 103,235 0.417 (T) 0.117 (T) 1.13 (1.09-1.17) 0 (0-40) 6.37e-12
rs7225002 chr17:44189067 KANSL1 G vs. A All: C 14 103,235 0.467 (G) 0.467 (A) 0.86 (0.83-0.88) 23 (0-59) 2.21e-20
rs56807059 chr17:44189270 KANSL1 C vs. A All: C 14 103,235 0.4 (C) 0.1 (C) 1.11 (1.07-1.15) 0 (0-33) 1.87e-09
rs11653367 chr17:44191483 KANSL1 G vs. A All: C 13 97,715 0.375 (G) 0.008 (G) 1.12 (1.07-1.16) 0 (0-43) 7.47e-08
rs34517924 chr17:44193713 KANSL1 G vs. A All: C 13 97,715 - - 0.90 (0.86-0.95) 0 (0-26) 9.66e-05
rs72628328 chr17:44215859 KANSL1 A vs. G All: C 11 92,764 - 0.367 (G) 0.90 (0.85-0.95) 0 (0-24) 9.55e-05