Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
23andMe.v2 (USA, Europe) C self-reported clinical diagnosis O 3261 (39%) 29499 (42%) 64 (11) - - - 49 (15) - 9,752

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1406072 chr17:44216322 KANSL1 A vs. C All: C 11 92,764 0.117 (A) 0.367 (A) 1.12 (1.06-1.18) 0 (0-25) 9.18e-05
rs72628329 chr17:44225798 KANSL1 C vs. T All: C 11 92,764 0.117 (C) 0.367 (C) 1.12 (1.06-1.19) 0 (0-26) 5.90e-05
rs56147261 chr17:44228894 KANSL1 T vs. C All: C 11 92,764 - 0.367 (C) 0.88 (0.83-0.94) 0 (0-22) 5.28e-05
rs60988411 chr17:44229559 KANSL1 C vs. T All: C 11 92,764 - 0.367 (T) 0.89 (0.84-0.94) 0 (0-20) 5.49e-05
rs59049733 chr17:44237744 KANSL1 C vs. A All: C 11 92,764 0.117 (C) 0.383 (C) 1.12 (1.06-1.19) 0 (0-21) 5.96e-05
rs2532281 chr17:44245171 KANSL1 T vs. G All: C 11 92,764 0.217 (T) - 0.71 (0.67-0.75) 0 (0-58) 8.73e-32
rs2532280 chr17:44245359 KANSL1 A vs. G All: C 11 92,764 0.217 (A) - 0.73 (0.69-0.77) 0 (0-58) 5.02e-32
rs2696658 chr17:44245766 KANSL1 A vs. G All: C 11 92,764 0.217 (A) - 0.78 (0.74-0.81) 0 (0-59) 6.38e-32
rs2532278 chr17:44246405 KANSL1 A vs. C All: C 11 92,764 0.217 (A) - 0.78 (0.75-0.81) 0 (0-60) 6.15e-32
rs2532277 chr17:44246527 KANSL1 C vs. T All: C 11 92,764 0.217 (C) - 0.73 (0.69-0.77) 0 (0-57) 7.75e-32
rs2532276 chr17:44246624 KANSL1 A vs. C All: C 11 92,764 0.217 (A) - 0.78 (0.74-0.81) 0 (0-60) 6.53e-32
rs2532275 chr17:44246997 KANSL1 A vs. G All: C 11 92,764 0.217 (A) - 0.78 (0.75-0.81) 0 (0-59) 6.61e-32
rs2240759 chr17:44247415 KANSL1 T vs. C All: C 11 92,764 0.117 (T) 0.367 (T) 1.13 (1.07-1.20) 0 (0-19) 4.13e-05
rs62060895 chr17:44250236 KANSL1 G vs. T All: C 11 92,764 0.208 (G) - 0.71 (0.67-0.75) 0 (0-57) 8.06e-32
rs2240757 chr17:44250433 KANSL1 C vs. T All: C 11 92,764 0.117 (C) 0.367 (C) 1.13 (1.07-1.21) 0 (0-24) 3.80e-05
rs2696664 chr17:44251698 KANSL1 G vs. A All: C 11 92,764 - - 1.30 (1.24-1.36) 0 (0-60) 6.19e-32
rs2732588 chr17:44262950 KANSL1 G vs. A All: C 10 88,826 0.408 (G) 0.117 (G) 1.23 (1.16-1.29) 6 (0-65) 1.07e-14
rs2532240 chr17:44265839 KANSL1 T vs. C All: C 10 88,826 0.458 (T) 0.492 (T) 0.78 (0.75-0.82) 43 (0-73) 6.19e-23
rs199460 chr17:44764775 NSF A vs. C All: C 15 108,990 - - 1.34 (1.26-1.43) 35 (0-65) 7.10e-21
rs62074079 (chr17:44764981) chr17:44547284 LRRC37A2 [-41593bp] C vs. G All: C 15 108,990 - - 1.46 (1.37-1.56) 11 (0-48) 1.61e-33
rs200403 chr17:44781143 NSF A vs. C All: C 15 108,990 - - 1.27 (1.21-1.32) 26 (0-60) 2.49e-27
rs116988420 chr17:44782279 NSF C vs. G All: C 15 108,990 - - 1.46 (1.37-1.55) 6 (0-57) 1.40e-34
rs17692129 chr17:44793283 NSF T vs. C All: C 11 94,570 0.317 (T) 0.208 (T) 1.07 (1.03-1.11) 24 (0-62) 1.83e-04
rs199451 chr17:44801784 NSF A vs. G All: C 15 108,990 0.208 (A) - 0.78 (0.75-0.81) 10 (0-48) 5.80e-34
rs35937770 chr17:44808360 NSF A vs. G All: C 11 94,570 0.308 (A) 0.217 (A) 1.08 (1.04-1.12) 24 (0-62) 8.26e-05
rs199447 chr17:44812188 NSF T vs. C All: C 15 108,990 0.208 (T) - 0.78 (0.75-0.81) 12 (0-50) 5.75e-34
rs9912530 chr17:44836302 NSF [+1472bp] T vs. C All: C 15 108,990 0.275 (T) 0.275 (C) 0.81 (0.78-0.84) 23 (0-58) 1.42e-26
rs199530 chr17:44836653 NSF [+1823bp] G vs. A All: C 15 108,990 0.242 (G) 0.275 (A) 0.80 (0.77-0.83) 26 (0-60) 3.86e-29
rs199528 chr17:44843136 WNT3 T vs. C All: C 15 108,990 0.192 (T) - 0.77 (0.74-0.81) 19 (0-56) 2.37e-34
rs199526 chr17:44847707 WNT3 C vs. G All: C 15 108,990 0.192 (C) 0.292 (G) 0.78 (0.75-0.82) 20 (0-56) 9.25e-32
rs199525 chr17:44847834 WNT3 G vs. T All: C 15 108,990 0.2 (G) - 0.77 (0.74-0.81) 19 (0-56) 2.78e-34
rs3809857 chr17:44848314 WNT3 T vs. G All: C 11 94,570 0.3 (T) 0.217 (T) 1.10 (1.06-1.15) 34 (0-68) 9.26e-06
rs62074125 chr17:44852612 WNT3 C vs. A All: C 11 94,570 0.25 (C) - 1.16 (1.10-1.22) 28 (0-64) 3.06e-08
rs199518 chr17:44854580 WNT3 A vs. C All: C 15 108,990 0.217 (A) 0.325 (C) 0.79 (0.76-0.82) 24 (0-59) 1.74e-28
rs199517 chr17:44854587 WNT3 A vs. G All: C 15 108,990 0.233 (A) 0.283 (G) 0.79 (0.76-0.82) 23 (0-59) 1.42e-28
rs199510 chr17:44857929 WNT3 C vs. A All: C 15 108,990 - - 1.30 (1.24-1.35) 24 (0-59) 1.69e-32
rs199508 chr17:44858838 WNT3 C vs. G All: C 15 108,990 0.225 (C) 0.425 (G) 0.79 (0.76-0.83) 27 (0-61) 1.31e-29
rs199498 chr17:44865603 WNT3 C vs. T All: C 15 108,990 0.192 (C) 0.442 (T) 0.77 (0.74-0.81) 6 (0-56) 3.49e-29
rs199497 chr17:44866602 WNT3 C vs. T All: C 13 97,715 0.2 (C) - 0.84 (0.80-0.88) 43 (0-70) 2.27e-11
rs1563304 chr17:44874453 WNT3 T vs. C All: C 14 103,235 0.2 (T) 0.0 (T) 0.88 (0.85-0.92) 45 (0-70) 2.36e-08
rs3851781 chr17:44891301 WNT3 T vs. C All: C 15 108,990 0.492 (T) 0.267 (C) 1.09 (1.05-1.12) 0 (0-45) 5.07e-07
rs72836354 chr17:44899464 WNT3 A vs. G All: C 15 108,990 0.475 (A) 0.233 (G) 1.09 (1.05-1.12) 0 (0-22) 3.00e-07
rs3851782 chr17:44901654 WNT3 A vs. G All: C 15 108,990 0.45 (A) - 1.07 (1.04-1.11) 0 (0-27) 1.24e-05
rs34724124 chr17:44902516 WNT3 A vs. G All: C 15 108,990 0.475 (A) 0.242 (G) 1.09 (1.05-1.12) 0 (0-27) 6.88e-07
rs8069437 chr17:44906949 WNT3 T vs. C All: C 15 108,990 0.167 (T) 0.0 (T) 0.91 (0.88-0.95) 15 (0-53) 6.00e-06
rs2165846 chr17:44941366 WNT9B G vs. A All: C 15 108,990 0.417 (G) 0.1 (A) 1.09 (1.05-1.12) 0 (0-43) 4.27e-07
rs6504591 chr17:44944828 WNT9B G vs. T All: C 15 108,990 0.467 (G) 0.1 (G) 0.93 (0.90-0.96) 29 (0-62) 1.92e-05
rs60372268 chr17:44947756 WNT9B G vs. A All: C 15 108,990 0.258 (G) 0.483 (G) 1.14 (1.10-1.19) 0 (0-51) 9.61e-10
rs61619946 chr17:44947757 WNT9B C vs. T All: C 15 108,990 0.267 (C) - 1.14 (1.10-1.19) 0 (0-51) 9.58e-10
rs57986961 chr17:44947821 WNT9B A vs. G All: C 15 108,990 0.317 (A) 0.483 (A) 1.12 (1.08-1.17) 0 (0-52) 2.35e-09