AP3D1, chr19:2100988-2164464 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
rs76522589 chr19:2174411 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.31 (1.16-1.47) 0 (0-55) 1.52e-05
rs117680470 chr19:2149648 AP3D1 C - 10 C vs. G 0.025 (C) - >1 (-) 0 (-) <0.05
rs142519375 chr19:2142215 AP3D1 C - 10 A vs. T - - >1 (-) 0 (-) <0.05
rs147156051 chr19:2172266 DOT1L C - 4 T vs. G - - >1 (-) 0 (-) <0.05
rs146183436 chr19:2102552 AP3D1 C - 4 T vs. C - - >1 (-) 0 (-) <0.05
rs75837893 chr19:2122458 AP3D1 C - 6 T vs. C 0.033 (T) - >1 (-) 0 (-) <0.05
chr19:2203555 chr19:2203555 DOT1L C - 9 T vs. G - - >1 (-) 22 (-) <0.05
rs145731586 chr19:2203551 DOT1L C - 9 T vs. C - - >1 (-) 22 (-) <0.05
rs74974755 chr19:2207701 DOT1L C - 5 A vs. T 0.025 (T) - <1 (-) 0 (-) <0.05
rs145968810 chr19:2156642 AP3D1 C - 4 C vs. G - - >1 (-) 0 (-) <0.05
rs72620507 chr19:2076457 MOB3A C - 11 A vs. C 0.075 (C) 0.208 (C) <1 (-) 38 (-) <0.05
rs740443 chr19:2069944 MOB3A [-1093bp] C - 11 T vs. C 0.05 (T) 0.183 (T) >1 (-) 39 (-) <0.05
rs72620506 chr19:2073657 MOB3A C - 11 T vs. C 0.083 (C) 0.192 (C) <1 (-) 37 (-) <0.05
rs75580960 chr19:2151761 AP3D1 C - 12 T vs. C 0.125 (C) - <1 (-) 11 (-) <0.05
rs1017084 chr19:2128054 AP3D1 C - 11 T vs. C 0.108 (C) 0.2 (C) <1 (-) 23 (-) <0.05
rs79158840 chr19:2158994 AP3D1 C - 12 T vs. C 0.133 (C) - <1 (-) 7 (-) <0.05
rs117734617 chr19:2193653 DOT1L C - 6 T vs. G 0.033 (T) - >1 (-) 0 (-) <0.05
rs138407468 chr19:2063210 MOB3A [-7827bp] C - 11 T vs. C - - >1 (-) 42 (-) <0.05
rs115935456 chr19:2168033 DOT1L C - 4 T vs. C - - <1 (-) 0 (-) <0.05
rs117415965 chr19:2201327 DOT1L C - 5 A vs. G - 0.017 (A) <1 (-) 0 (-) <0.05
rs11672897 chr19:2214242 DOT1L C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs3746159 chr19:2210269 DOT1L C - 12 T vs. C 0.125 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs76569620 chr19:2200243 DOT1L C - 10 T vs. C 0.05 (T) - >1 (-) 12 (-) >0.05
rs2240128 chr19:2187276 DOT1L C - 12 T vs. C 0.117 (C) 0.233 (C) >1 (-) 0 (-) >0.05
rs76144544 chr19:2197068 DOT1L C - 11 T vs. C 0.025 (T) - >1 (-) 44 (-) >0.05
rs7249577 chr19:2168834 DOT1L C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7256735 chr19:2169121 DOT1L C - 12 T vs. G 0.125 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs7251881 chr19:2169067 DOT1L C - 12 A vs. G 0.142 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs59945167 chr19:2129866 AP3D1 C - 12 T vs. G 0.083 (T) 0.258 (T) <1 (-) 46 (-) >0.05
rs2385543 chr19:2162639 AP3D1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs3803915 chr19:2160529 AP3D1 C - 12 A vs. C 0.125 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs74254215 chr19:2135586 AP3D1 C - 12 C vs. G 0.075 (C) 0.1 (C) <1 (-) 35 (-) >0.05
rs55848295 chr19:2105510 AP3D1 C - 10 T vs. C 0.15 (T) - >1 (-) 3 (-) >0.05
rs2238610 chr19:2146852 AP3D1 C - 12 T vs. C 0.5 (T) 0.425 (T) >1 (-) 0 (-) >0.05
rs72983502 chr19:2156954 AP3D1 C - 12 T vs. C 0.2 (C) - <1 (-) 0 (-) >0.05
rs2894468 chr19:2053634 MKNK2 [+2391bp] C - 12 A vs. G - - <1 (-) 25 (-) >0.05
rs2238609 chr19:2146629 AP3D1 C - 12 T vs. C 0.5 (C) 0.442 (C) <1 (-) 0 (-) >0.05
rs3815146 chr19:2192015 DOT1L C - 12 T vs. C 0.367 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs2005325 chr19:2148895 AP3D1 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs79145059 chr19:2114694 AP3D1 C - 10 A vs. G 0.033 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs12979965 chr19:2131148 AP3D1 C - 12 A vs. G 0.492 (A) 0.4 (A) >1 (-) 0 (-) >0.05
rs78463393 chr19:2152185 AP3D1 C - 12 A vs. G 0.058 (A) 0.1 (A) <1 (-) 34 (-) >0.05
rs758286 chr19:2109834 AP3D1 C - 10 A vs. G 0.033 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs12460763 chr19:2138507 AP3D1 C - 12 A vs. G 0.492 (A) 0.408 (A) >1 (-) 0 (-) >0.05
rs2108825 chr19:2136515 AP3D1 C - 12 T vs. C 0.492 (T) 0.408 (T) >1 (-) 0 (-) >0.05
rs35751290 chr19:2139357 AP3D1 C - 12 A vs. G 0.5 (A) 0.408 (A) >1 (-) 0 (-) >0.05
rs2238601 chr19:2140374 AP3D1 C - 12 T vs. G 0.492 (G) 0.425 (G) <1 (-) 0 (-) >0.05
rs2159213 chr19:2136102 AP3D1 C - 12 T vs. C 0.492 (T) 0.408 (T) >1 (-) 0 (-) >0.05
rs2238599 chr19:2140009 AP3D1 C - 12 T vs. C 0.492 (C) 0.408 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]