LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
rs2263418 chr12:40582993 LRRK2 [-7553bp] All: C 108,990 15 A vs. G 0.117 (A) 0.0 (A) 1.17 (1.11-1.23) 0 (0-34) 9.35e-10
rs11175620 chr12:40610864 LRRK2 All: C 108,990 15 C vs. G 0.142 (C) - 1.16 (1.11-1.22) 0 (0-25) 1.73e-09
rs7294619 chr12:40617202 LRRK2 All: C 108,990 15 C vs. T 0.142 (C) - 1.15 (1.10-1.21) 0 (0-26) 3.36e-09
rs10878226 chr12:40617692 LRRK2 All: C 108,990 15 C vs. G 0.142 (C) - 1.15 (1.10-1.21) 0 (0-26) 3.54e-09
rs79579007 chr12:40774678 LRRK2 [+11591bp] All: C 103,470 14 G vs. A - - 0.70 (0.63-0.79) 28 (0-62) 5.28e-09
rs11175645 chr12:40621892 LRRK2 All: C 108,990 15 G vs. A 0.142 (G) - 1.15 (1.10-1.21) 0 (0-25) 5.53e-09
rs74351518 chr12:40775059 LRRK2 [+11972bp] All: C 103,470 14 G vs. A - - 0.70 (0.62-0.79) 35 (0-66) 6.44e-09
rs11175658 chr12:40624310 LRRK2 All: C 108,990 15 G vs. A 0.133 (G) - 1.15 (1.10-1.20) 0 (0-25) 8.06e-09
rs11175655 chr12:40623727 LRRK2 All: C 108,990 15 A vs. G 0.142 (A) - 1.15 (1.09-1.20) 0 (0-24) 8.79e-09
rs117762348 chr12:40597612 LRRK2 All: C 108,990 15 G vs. A 0.092 (G) - 1.18 (1.12-1.25) 0 (0-7) 1.83e-08
rs17492082 chr12:40790181 MUC19 All: C 108,990 15 A vs. G 0.183 (A) - 1.13 (1.08-1.18) 0 (0-37) 1.93e-08
rs9705735 chr12:40795049 MUC19 All: C 108,990 15 G vs. A - - 0.89 (0.85-0.92) 0 (0-37) 1.94e-08
rs17444612 chr12:40788777 MUC19 All: C 108,990 15 G vs. A 0.183 (G) - 1.13 (1.08-1.18) 0 (0-37) 2.15e-08
rs11564273 chr12:40598152 LRRK2 All: C 108,990 15 G vs. T 0.092 (G) - 1.18 (1.11-1.25) 0 (0-8) 2.30e-08
rs17444542 chr12:40784690 MUC19 [-2507bp] All: C 108,990 15 G vs. C 0.183 (G) 0.008 (G) 1.13 (1.08-1.18) 0 (0-37) 2.45e-08
rs57997594 chr12:40798352 MUC19 All: C 108,990 15 C vs. T 0.183 (C) - 1.13 (1.08-1.18) 0 (0-37) 3.00e-08
rs79410089 chr12:40592064 LRRK2 All: C 108,990 15 G vs. T 0.092 (G) - 1.19 (1.12-1.27) 0 (0-35) 5.49e-08
rs6581593 chr12:40602765 LRRK2 All: C 108,990 15 T vs. C 0.092 (T) - 1.18 (1.11-1.25) 0 (0-11) 6.12e-08
rs73279554 chr12:40801122 MUC19 All: C 108,990 15 A vs. G 0.217 (A) - 1.12 (1.07-1.16) 0 (0-37) 6.26e-08
rs118081441 chr12:40810213 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.31 (1.19-1.44) 44 (0-69) 7.27e-08
rs77842130 chr12:40802382 MUC19 All: C 108,990 15 G vs. T 0.017 (G) - 1.32 (1.19-1.46) 43 (0-69) 7.71e-08
rs73279557 chr12:40803246 MUC19 All: C 108,990 15 T vs. G 0.217 (T) - 1.12 (1.07-1.16) 0 (0-37) 8.34e-08
rs17492138 chr12:40803486 MUC19 All: C 108,990 15 C vs. A 0.217 (C) - 1.12 (1.07-1.16) 0 (0-36) 9.18e-08
rs75200805 chr12:40807993 MUC19 All: C 108,990 15 G vs. A 0.017 (G) - 1.31 (1.18-1.44) 45 (0-70) 9.81e-08
rs17444751 chr12:40807930 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.31 (1.18-1.44) 45 (0-70) 9.83e-08
rs17467137 chr12:40809502 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.31 (1.19-1.44) 45 (0-70) 9.83e-08
rs4768253 chr12:40808726 MUC19 All: C 108,990 15 T vs. C 0.017 (T) - 1.31 (1.18-1.44) 45 (0-70) 9.87e-08
rs116946443 chr12:40810238 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.31 (1.18-1.44) 45 (0-70) 1.01e-07
rs117237084 chr12:40810177 MUC19 All: C 108,990 15 G vs. A 0.017 (G) - 1.31 (1.18-1.44) 45 (0-70) 1.01e-07
rs80220485 chr12:40809256 MUC19 All: C 108,990 15 T vs. C 0.017 (T) - 1.31 (1.18-1.44) 45 (0-70) 1.01e-07
rs74564935 chr12:40811863 MUC19 All: C 108,990 15 T vs. G 0.017 (T) - 1.31 (1.18-1.44) 45 (0-70) 1.02e-07
rs5015147 chr12:40812392 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.31 (1.18-1.44) 45 (0-70) 1.03e-07
rs17467102 chr12:40806594 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.31 (1.18-1.44) 45 (0-70) 1.04e-07
rs74565412 chr12:40806911 MUC19 All: C 108,990 15 G vs. A 0.017 (G) 0.017 (G) 1.30 (1.18-1.44) 45 (0-70) 1.04e-07
rs117435671 chr12:40812896 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.31 (1.18-1.44) 45 (0-70) 1.07e-07
rs17444744 chr12:40807876 MUC19 All: C 108,990 15 G vs. T 0.017 (G) - 1.31 (1.19-1.45) 45 (0-70) 1.07e-07
rs12422390 chr12:40803129 MUC19 All: C 108,990 15 T vs. C 0.017 (T) 0.017 (T) 1.30 (1.18-1.44) 45 (0-70) 1.19e-07
rs17467095 chr12:40805667 MUC19 All: C 108,990 15 A vs. C 0.017 (A) 0.017 (A) 1.30 (1.18-1.44) 45 (0-70) 1.25e-07
rs11564255 chr12:40805147 MUC19 All: C 108,990 15 G vs. A 0.017 (G) - 1.30 (1.18-1.44) 45 (0-70) 1.27e-07
rs117909126 chr12:40809338 MUC19 All: C 108,990 15 T vs. C 0.017 (T) - 1.30 (1.18-1.43) 47 (3-71) 1.29e-07
rs17467088 chr12:40804713 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.30 (1.18-1.44) 45 (0-70) 1.29e-07
rs117591458 chr12:40801296 MUC19 All: C 108,990 15 G vs. A 0.017 (G) - 1.30 (1.18-1.44) 44 (0-70) 1.37e-07
rs12427134 chr12:40807097 MUC19 All: C 108,990 15 T vs. C 0.008 (T) - 1.31 (1.19-1.45) 37 (0-66) 1.52e-07
rs17467144 chr12:40810161 MUC19 All: C 108,990 15 A vs. G 0.008 (A) - 1.31 (1.19-1.45) 37 (0-66) 1.55e-07
rs117844952 chr12:40812941 MUC19 All: C 108,990 15 C vs. T 0.008 (C) - 1.31 (1.18-1.45) 37 (0-66) 1.63e-07
rs117725664 chr12:40797582 MUC19 All: C 108,990 15 G vs. T 0.017 (G) 0.017 (G) 1.30 (1.18-1.44) 40 (0-67) 1.96e-07
rs150169357 chr12:40797959 MUC19 All: C 108,990 15 C vs. A - - 0.74 (0.66-0.83) 38 (0-66) 2.33e-07
rs17444667 chr12:40799277 MUC19 All: C 108,990 15 A vs. C 0.017 (A) - 1.30 (1.17-1.43) 43 (0-69) 2.33e-07
rs4768254 chr12:40808799 MUC19 All: C 108,990 15 G vs. A - 0.042 (A) 0.77 (0.70-0.85) 51 (11-73) 2.33e-07

Association studies for this region [+]