STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
rs1474055 chr2:169110394 STK39 [+5743bp] All: C 108,990 15 C vs. T - - 0.82 (0.79-0.86) 9 (0-47) 7.11e-16
rs908594 chr2:169133796 STK39 [+29145bp] All: C 108,990 15 G vs. A 0.092 (G) 0.317 (G) 1.21 (1.16-1.27) 14 (0-51) 7.27e-16
rs12987123 chr2:169120541 STK39 [+15890bp] All: C 108,990 15 T vs. A 0.083 (T) 0.308 (T) 1.21 (1.16-1.27) 13 (0-51) 9.47e-16
rs4613239 chr2:169119609 STK39 [+14958bp] All: C 108,990 15 G vs. C 0.083 (G) 0.308 (G) 1.21 (1.15-1.27) 7 (0-43) 5.44e-15
rs2102808 chr2:169117025 STK39 [+12374bp] All: C 108,990 15 T vs. G 0.083 (T) 0.308 (T) 1.22 (1.16-1.28) 13 (0-51) 6.77e-15
rs34316957 chr2:169150494 STK39 [+45843bp] All: C 108,990 15 A vs. G 0.108 (A) 0.308 (A) 1.20 (1.14-1.25) 0 (0-52) 1.85e-14
rs2222151 chr2:169150881 STK39 [+46230bp] All: C 108,990 15 A vs. G 0.1 (A) 0.308 (A) 1.20 (1.14-1.26) 0 (0-51) 1.89e-14
rs9917256 chr2:169143035 STK39 [+38384bp] All: C 108,990 15 A vs. G 0.108 (A) 0.308 (A) 1.20 (1.14-1.25) 0 (0-50) 3.01e-14
rs2390669 chr2:169091942 STK39 All: C 108,990 15 C vs. A 0.083 (C) 0.333 (C) 1.20 (1.15-1.26) 16 (0-54) 1.79e-13
rs8179807 chr2:169100331 STK39 All: C 108,990 15 C vs. T 0.275 (C) 0.192 (T) 1.11 (1.07-1.15) 0 (0-50) 1.17e-08
rs7569435 chr2:169122145 STK39 [+17494bp] All: C 108,990 15 A vs. C 0.275 (A) 0.192 (C) 1.11 (1.07-1.15) 0 (0-50) 2.35e-08
rs1400637 chr2:169136489 STK39 [+31838bp] All: C 108,990 15 A vs. C 0.275 (A) 0.217 (C) 1.11 (1.07-1.15) 0 (0-49) 2.39e-08
rs12612984 chr2:169127120 STK39 [+22469bp] All: C 108,990 15 C vs. A 0.275 (C) 0.192 (A) 1.11 (1.07-1.15) 0 (0-47) 3.86e-08
rs13392079 chr2:169119178 STK39 [+14527bp] All: C 108,990 15 C vs. T - - 0.91 (0.87-0.94) 0 (0-53) 5.56e-08
rs77611446 chr2:169105746 STK39 [+1095bp] C - 13 T vs. G 0.008 (T) - >1 (-) 35 (-) <1.00e-06
rs2724171 chr2:169154462 STK39 [+49811bp] All: C 108,990 15 C vs. A 0.45 (C) 0.142 (C) 0.92 (0.89-0.95) 0 (0-41) 2.83e-07
rs12994598 chr2:169144350 STK39 [+39699bp] All: C 108,990 15 G vs. T - - 0.91 (0.88-0.95) 0 (0-9) 2.92e-07
rs2724176 chr2:169142042 STK39 [+37391bp] All: C 108,990 15 G vs. T 0.433 (G) 0.383 (G) 1.09 (1.05-1.12) 0 (0-10) 3.49e-07
rs12373660 chr2:169148282 STK39 [+43631bp] All: C 108,990 15 G vs. A 0.442 (G) 0.392 (G) 1.09 (1.05-1.12) 0 (0-7) 4.67e-07
rs2090462 chr2:169149135 STK39 [+44484bp] All: C 108,990 15 A vs. G 0.442 (A) 0.392 (A) 1.08 (1.05-1.12) 0 (0-12) 6.54e-07
rs2390644 chr2:169146960 STK39 [+42309bp] All: C 108,990 15 C vs. T 0.433 (C) 0.392 (C) 1.08 (1.05-1.12) 0 (0-10) 6.91e-07
rs1607179 chr2:169153615 STK39 [+48964bp] All: C 108,990 15 C vs. T 0.45 (C) 0.475 (C) 1.08 (1.05-1.12) 0 (0-18) 7.09e-07
rs6755949 chr2:169143079 STK39 [+38428bp] All: C 108,990 15 G vs. T 0.433 (G) 0.392 (G) 1.08 (1.05-1.12) 0 (0-11) 7.46e-07
rs7563871 chr2:169150589 STK39 [+45938bp] All: C 108,990 15 A vs. G 0.442 (A) 0.392 (A) 1.08 (1.05-1.12) 0 (0-13) 7.85e-07
rs974314 chr2:169149965 STK39 [+45314bp] All: C 108,990 15 G vs. A 0.442 (G) 0.392 (G) 1.08 (1.05-1.12) 0 (0-13) 7.86e-07
rs2203704 chr2:169150945 STK39 [+46294bp] All: C 108,990 15 C vs. T 0.442 (C) 0.4 (C) 1.08 (1.05-1.12) 0 (0-13) 7.88e-07
rs11686570 chr2:169144248 STK39 [+39597bp] All: C 108,990 15 T vs. G 0.433 (T) 0.392 (T) 1.08 (1.05-1.12) 0 (0-12) 8.05e-07
rs1517336 chr2:169152936 STK39 [+48285bp] All: C 108,990 15 G vs. A 0.442 (G) 0.392 (G) 1.08 (1.05-1.12) 0 (0-11) 8.86e-07
rs971899 chr2:169152291 STK39 [+47640bp] All: C 108,990 15 G vs. A 0.442 (G) 0.392 (G) 1.08 (1.05-1.12) 0 (0-12) 9.73e-07
rs10207387 chr2:169154232 STK39 [+49581bp] All: C 108,990 15 A vs. C 0.433 (A) 0.392 (A) 1.08 (1.05-1.12) 0 (0-6) 1.08e-06
rs2138754 chr2:169147533 STK39 [+42882bp] All: C 108,990 15 T vs. C - - 0.92 (0.89-0.95) 0 (0-7) 1.30e-06
rs2090461 chr2:169148999 STK39 [+44348bp] All: C 108,990 15 T vs. C - - 0.92 (0.90-0.95) 0 (0-20) 1.31e-06
rs72884554 chr2:169115613 STK39 [+10962bp] All: C 108,990 15 T vs. G 0.475 (T) 0.108 (T) 0.92 (0.89-0.95) 0 (0-32) 1.57e-06
rs72884569 chr2:169129478 STK39 [+24827bp] All: C 108,990 15 C vs. T 0.433 (C) 0.125 (C) 0.92 (0.89-0.95) 0 (0-26) 1.93e-06
rs6743239 chr2:169089246 STK39 All: C 108,990 15 C vs. T - - 0.91 (0.87-0.94) 24 (0-59) 2.37e-06
rs2677270 chr2:169152518 STK39 [+47867bp] All: C 108,990 15 G vs. A - - 0.93 (0.90-0.96) 0 (0-11) 2.53e-06
rs10176669 chr2:169084859 STK39 All: C 108,990 15 T vs. C 0.158 (T) 0.458 (T) 1.10 (1.05-1.14) 23 (0-58) 8.02e-06
rs12622375 chr2:169110621 STK39 [+5970bp] All: C 108,990 15 G vs. A 0.458 (G) 0.117 (G) 0.93 (0.90-0.96) 0 (0-22) 8.05e-06
rs950535 chr2:169095854 STK39 All: C 108,990 15 A vs. G 0.408 (A) 0.117 (A) 0.93 (0.90-0.96) 0 (0-17) 2.15e-05
rs10175790 chr2:169094746 STK39 All: C 108,990 15 C vs. T 0.4 (C) 0.117 (C) 0.93 (0.90-0.96) 0 (0-18) 2.31e-05
rs5007396 chr2:169095829 STK39 All: C 108,990 15 T vs. C 0.4 (T) 0.108 (T) 0.93 (0.90-0.96) 0 (0-15) 2.40e-05
rs13430810 chr2:169090774 STK39 All: C 108,990 15 C vs. T 0.417 (C) 0.108 (C) 0.93 (0.90-0.96) 0 (0-21) 2.46e-05
rs13401489 chr2:169096718 STK39 All: C 108,990 15 G vs. T 0.458 (G) 0.125 (G) 0.93 (0.90-0.96) 0 (0-27) 2.47e-05
rs10194006 chr2:169090562 STK39 All: C 108,990 15 C vs. T 0.417 (C) 0.117 (C) 0.93 (0.90-0.96) 0 (0-20) 3.65e-05
rs6747565 chr2:169090464 STK39 All: C 108,990 15 C vs. T 0.417 (C) 0.117 (C) 0.93 (0.90-0.97) 0 (0-20) 4.35e-05
rs4438452 chr2:169071348 STK39 All: C 108,990 15 T vs. C 0.133 (T) 0.267 (T) 1.09 (1.04-1.13) 25 (0-60) 8.27e-05
rs1517320 chr2:169082242 STK39 All: C 108,990 15 A vs. G 0.133 (A) 0.275 (A) 1.08 (1.04-1.13) 19 (0-56) 9.52e-05
rs4668048 chr2:169079350 STK39 All: C 108,990 15 G vs. T 0.133 (G) 0.275 (G) 1.08 (1.04-1.13) 20 (0-56) 1.23e-04
rs78405907 chr2:169105566 STK39 [+915bp] C - 11 T vs. C 0.025 (T) - >1 (-) 0 (-) <0.05

Association studies for this region [+]