AP3D1, chr19:2100988-2164464 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56747968 chr19:2059322 MKNK2 [+8079bp] C - 11 A vs. G 0.042 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs4807209 chr19:2173080 DOT1L C - 11 A vs. C 0.033 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs4807207 chr19:2170110 DOT1L C - 11 T vs. G - 0.0 (T) <1 (-) 0 (-) >0.05
rs62128371 chr19:2085826 MOB3A C - 11 A vs. T - - <1 (-) 34 (-) >0.05
rs77825851 chr19:2207386 DOT1L C - 11 C vs. G 0.025 (C) - >1 (-) 37 (-) >0.05
rs734931 chr19:2064016 MOB3A [-7021bp] C - 11 T vs. G 0.125 (G) - >1 (-) 17 (-) >0.05
rs72981462 chr19:2064457 MOB3A [-6580bp] C - 11 A vs. G 0.025 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs34656710 chr19:2131580 AP3D1 C - 12 A vs. G - - <1 (-) 30 (-) >0.05
rs62128363 chr19:2060349 MKNK2 [+9106bp] C - 11 T vs. C - 0.092 (T) <1 (-) 0 (-) >0.05
rs2240658 chr19:2137870 AP3D1 C - 12 T vs. C 0.433 (T) 0.292 (T) <1 (-) 32 (-) >0.05
rs9676420 chr19:2189209 DOT1L C - 11 A vs. G 0.025 (A) - >1 (-) 34 (-) >0.05
rs35792872 chr19:2206163 DOT1L C - 12 A vs. G - 0.475 (G) <1 (-) 0 (-) >0.05
rs2018890 chr19:2137495 AP3D1 C - 12 A vs. G - - >1 (-) 33 (-) >0.05
rs2238602 chr19:2144429 AP3D1 C - 12 A vs. G 0.425 (G) 0.308 (G) >1 (-) 34 (-) >0.05
rs2238603 chr19:2144471 AP3D1 C - 12 A vs. G 0.433 (G) 0.308 (G) >1 (-) 34 (-) >0.05
rs1859952 chr19:2142925 AP3D1 C - 12 A vs. G - - >1 (-) 34 (-) >0.05
rs35288362 chr19:2141982 AP3D1 C - 12 T vs. C 0.433 (C) - >1 (-) 34 (-) >0.05
rs12978179 chr19:2172378 DOT1L C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs10404242 chr19:2059585 MKNK2 [+8342bp] C - 11 T vs. C 0.3 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs12980238 chr19:2138848 AP3D1 C - 12 T vs. C - - <1 (-) 34 (-) >0.05
rs12172871 chr19:2084778 MOB3A C - 11 T vs. C - - <1 (-) 19 (-) >0.05
rs12981780 chr19:2133465 AP3D1 C - 12 T vs. C 0.433 (T) 0.283 (T) <1 (-) 31 (-) >0.05
rs2240657 chr19:2116833 AP3D1 C - 12 T vs. C - 0.183 (C) >1 (-) 12 (-) >0.05
rs8108461 chr19:2186757 DOT1L C - 12 T vs. C 0.408 (T) 0.45 (T) <1 (-) 0 (-) >0.05
rs12981497 chr19:2133332 AP3D1 C - 12 C vs. G 0.433 (G) 0.283 (G) >1 (-) 32 (-) >0.05
rs59447225 chr19:2057924 MKNK2 [+6681bp] C - 11 C vs. G 0.033 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs3786969 chr19:2141110 AP3D1 C - 12 A vs. C 0.433 (C) 0.292 (C) >1 (-) 35 (-) >0.05
rs2238605 chr19:2144804 AP3D1 C - 12 A vs. C - - >1 (-) 34 (-) >0.05
rs2238606 chr19:2144989 AP3D1 C - 12 T vs. C 0.433 (C) 0.3 (C) >1 (-) 34 (-) >0.05
rs2238608 chr19:2145330 AP3D1 C - 12 A vs. G 0.433 (G) 0.308 (G) >1 (-) 34 (-) >0.05
rs35500266 chr19:2131566 AP3D1 C - 12 T vs. C - - <1 (-) 31 (-) >0.05
rs62128400 chr19:2133831 AP3D1 C - 12 A vs. G - - <1 (-) 32 (-) >0.05
rs36065733 chr19:2163771 AP3D1 C - 12 T vs. G 0.458 (G) 0.492 (T) >1 (-) 0 (-) >0.05
rs2238597 chr19:2136379 AP3D1 C - 12 A vs. G - 0.183 (A) <1 (-) 33 (-) >0.05
rs12609327 chr19:2183000 DOT1L C - 12 A vs. C 0.483 (A) 0.45 (A) >1 (-) 0 (-) >0.05
rs1859953 chr19:2145450 AP3D1 C - 12 T vs. C 0.433 (C) 0.308 (C) >1 (-) 33 (-) >0.05
rs143776767 chr19:2070273 MOB3A [-764bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs7248941 chr19:2190690 DOT1L C - 12 T vs. C 0.45 (C) 0.442 (T) >1 (-) 0 (-) >0.05
rs140746784 chr19:2063925 MOB3A [-7112bp] C - 7 A vs. G - - >1 (-) 45 (-) >0.05
rs28559982 chr19:2084839 MOB3A C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs10404906 chr19:2059863 MKNK2 [+8620bp] C - 11 T vs. C 0.292 (C) 0.292 (C) >1 (-) 8 (-) >0.05
rs4806832 chr19:2184652 DOT1L C - 12 T vs. C 0.442 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs2238613 chr19:2149829 AP3D1 C - 10 A vs. G - 0.158 (G) >1 (-) 0 (-) >0.05
rs12986413 chr19:2170954 DOT1L C - 12 A vs. T 0.475 (T) 0.458 (A) >1 (-) 0 (-) >0.05
rs2074553 chr19:2190774 DOT1L C - 12 A vs. T 0.45 (A) 0.458 (T) <1 (-) 0 (-) >0.05
rs10423642 chr19:2058815 MKNK2 [+7572bp] C - 11 T vs. C 0.1 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs142070017 chr19:2139293 AP3D1 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs10417087 chr19:2119219 AP3D1 C - 12 T vs. C - 0.183 (C) >1 (-) 17 (-) >0.05
rs117891118 chr19:2058657 MKNK2 [+7414bp] C - 8 A vs. G 0.017 (A) - >1 (-) 2 (-) >0.05
rs143035114 chr19:2118354 AP3D1 C - 6 A vs. G - - <1 (-) 12 (-) >0.05

Association studies for this region [+]