ATP6V1G2, chr6:31512239-31516204 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3130062 chr6:31525912 NFKBIL1 All: C 103,235 14 C vs. T 0.1 (C) 0.0 (C) 1.18 (1.10-1.26) 17 (0-55) 1.52e-06
Meta_image?name=rs3130062

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3093990 chr6:31491826 MCCD1 [-4668bp] C - 12 A vs. G - - >1 (-) 11 (-) <0.05
rs3093995 chr6:31488904 MCCD1 [-7590bp] C - 12 T vs. C 0.208 (C) 0.067 (C) <1 (-) 11 (-) <0.05
rs3093950 chr6:31486901 MICB [+8000bp] C - 12 T vs. C 0.208 (T) 0.05 (T) >1 (-) 9 (-) <0.05
rs3130640 chr6:31487144 MICB [+8243bp] C - 12 A vs. G - - >1 (-) 8 (-) <0.05
rs3093982 chr6:31497244 MCCD1 C - 12 A vs. G 0.208 (A) 0.05 (A) >1 (-) 21 (-) <0.05
rs3130052 chr6:31495620 MCCD1 [-874bp] C - 12 T vs. C - - <1 (-) 12 (-) <0.05
rs3093984 chr6:31495370 MCCD1 [-1124bp] C - 12 A vs. G 0.175 (A) 0.067 (A) >1 (-) 12 (-) <0.05
rs144802800 chr6:31499402 DDX39B C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs3130054 chr6:31496776 MCCD1 C - 12 T vs. G 0.217 (T) 0.05 (T) >1 (-) 11 (-) <0.05
rs3093983 chr6:31496925 MCCD1 C - 12 A vs. G 0.208 (G) 0.067 (G) <1 (-) 11 (-) <0.05
rs3093979 chr6:31497744 MCCD1 C - 12 A vs. G 0.208 (G) 0.067 (G) <1 (-) 11 (-) <0.05
rs3093980 chr6:31497478 MCCD1 C - 12 A vs. G 0.233 (A) 0.067 (A) >1 (-) 11 (-) <0.05
rs3093981 chr6:31497457 MCCD1 C - 12 A vs. G 0.208 (A) 0.033 (A) >1 (-) 11 (-) <0.05
rs3115537 chr6:31497835 MCCD1 C - 12 C vs. G 0.208 (G) 0.067 (G) <1 (-) 11 (-) <0.05
rs3130056 chr6:31499354 DDX39B C - 12 T vs. C 0.208 (C) 0.067 (C) <1 (-) 11 (-) <0.05
rs3093978 chr6:31498497 DDX39B C - 12 A vs. C 0.208 (C) 0.067 (C) <1 (-) 11 (-) <0.05
rs3093948 chr6:31501413 DDX39B C - 12 A vs. G 0.208 (A) 0.067 (A) >1 (-) 9 (-) <0.05
rs3828916 chr6:31465915 MICB C - 12 C vs. G 0.275 (G) 0.1 (G) <1 (-) 34 (-) <0.05
rs3130051 chr6:31495588 MCCD1 [-906bp] C - 12 T vs. C - - >1 (-) 7 (-) <0.05
rs3093976 chr6:31502861 DDX39B C - 12 A vs. G 0.225 (A) 0.058 (A) >1 (-) 9 (-) <0.05
rs3130057 chr6:31504587 DDX39B C - 12 T vs. G 0.208 (G) 0.067 (G) <1 (-) 9 (-) <0.05
rs3131628 chr6:31502767 DDX39B C - 12 T vs. C 0.208 (C) 0.058 (C) <1 (-) 9 (-) <0.05
rs3130058 chr6:31505887 DDX39B C - 12 T vs. C 0.208 (T) 0.067 (T) >1 (-) 9 (-) <0.05
rs7769073 chr6:31554607 LST1 C - 12 A vs. T 0.017 (A) - <1 (-) 0 (-) <0.05
rs1129640 chr6:31506624 DDX39B C - 12 T vs. C 0.208 (T) 0.067 (T) >1 (-) 9 (-) <0.05
rs2523510 chr6:31507883 DDX39B C - 12 A vs. G 0.208 (G) 0.067 (G) <1 (-) 9 (-) <0.05
rs2286713 chr6:31473844 MICB C - 12 T vs. C 0.275 (T) 0.1 (T) >1 (-) 38 (-) <0.05
rs3093953 chr6:31474688 MICB C - 12 T vs. G 0.275 (T) 0.1 (T) >1 (-) 38 (-) <0.05
rs3093954 chr6:31474449 MICB C - 12 T vs. G 0.283 (T) 0.092 (T) >1 (-) 38 (-) <0.05
rs2523511 chr6:31506854 DDX39B C - 12 T vs. C 0.208 (C) 0.067 (C) <1 (-) 9 (-) <0.05
rs2844480 chr6:31564821 NCR3 [+4059bp] C - 12 T vs. C 0.2 (T) 0.142 (T) <1 (-) 0 (-) <0.05
rs3134899 chr6:31473286 MICB C - 12 T vs. C 0.275 (C) 0.1 (C) <1 (-) 38 (-) <0.05
rs3130925 chr6:31463621 MICB C - 12 A vs. G 0.275 (A) - >1 (-) 34 (-) <0.05
rs3134897 chr6:31466547 MICB C - 12 T vs. C 0.275 (T) 0.092 (T) >1 (-) 35 (-) <0.05
rs3131629 chr6:31501817 DDX39B C - 12 A vs. T 0.225 (T) - <1 (-) 10 (-) <0.05
rs3095234 chr6:31464571 MICB C - 12 T vs. C 0.275 (C) 0.1 (C) <1 (-) 34 (-) <0.05
rs3130927 chr6:31464992 MICB C - 12 A vs. G 0.283 (A) - >1 (-) 35 (-) <0.05
rs3093955 chr6:31469649 MICB C - 12 T vs. G 0.292 (G) - <1 (-) 36 (-) <0.05
rs3094003 chr6:31469251 MICB C - 12 C vs. G 0.275 (C) 0.1 (C) >1 (-) 36 (-) <0.05
rs3094002 chr6:31471222 MICB C - 12 A vs. G - - >1 (-) 36 (-) <0.05
rs35963002 chr6:31561548 NCR3 [+786bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs3095230 chr6:31470673 MICB C - 12 A vs. G 0.292 (G) 0.083 (G) <1 (-) 36 (-) <0.05
rs3095232 chr6:31470148 MICB C - 12 A vs. G 0.275 (G) 0.1 (G) <1 (-) 36 (-) <0.05
rs28732146 chr6:31561353 NCR3 [+591bp] C - 12 A vs. T - - <1 (-) 0 (-) <0.05
rs2429642 chr6:31486962 MICB [+8061bp] C - 12 A vs. G - 0.15 (A) <1 (-) 0 (-) <0.05
rs34816476 chr6:31557381 NCR3 C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs3130638 chr6:31487540 MICB [+8639bp] C - 12 T vs. C - - >1 (-) 22 (-) <0.05
rs2516489 chr6:31488038 MCCD1 [-8456bp] C - 12 T vs. C 0.167 (T) 0.167 (T) <1 (-) 0 (-) <0.05
rs1800610 chr6:31543827 TNF C - 12 A vs. G 0.042 (A) 0.217 (A) >1 (-) 0 (-) <0.05
rs769178 chr6:31547514 LTB [-788bp] C - 12 T vs. G 0.05 (T) 0.175 (T) >1 (-) 0 (-) <0.05

Association studies for this region [+]