HLA-DRB1, chr6:32546546-32557625 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs504594 - HLA-DRB1 All: C 104,595 13 C vs. A - - 1.24 (1.17-1.32) 36 (0-67) 5.73e-13
Meta_image?name=rs504594

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9271327 chr6:32582533 HLA-DQA1 [-13423bp] C - 4 C vs. G 0.283 (C) 0.367 (C) >1 (-) 8 (-) >0.05
rs9271289 chr6:32581305 HLA-DQA1 [-14651bp] C - 4 T vs. C 0.283 (T) 0.4 (T) >1 (-) 7 (-) >0.05
rs9271333 chr6:32582678 HLA-DQA1 [-13278bp] C - 4 T vs. C 0.15 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs9271334 chr6:32582711 HLA-DQA1 [-13245bp] C - 4 A vs. C 0.15 (C) 0.392 (C) <1 (-) 0 (-) >0.05
rs7756647 chr6:32582843 HLA-DQA1 [-13113bp] C - 4 A vs. G 0.15 (G) 0.383 (G) <1 (-) 0 (-) >0.05
rs9271302 chr6:32581621 HLA-DQA1 [-14335bp] C - 4 T vs. C 0.275 (C) 0.383 (C) <1 (-) 7 (-) >0.05
rs9271299 chr6:32581537 HLA-DQA1 [-14419bp] C - 4 C vs. G 0.283 (C) 0.383 (C) >1 (-) 6 (-) >0.05
rs641685 chr6:32582003 HLA-DQA1 [-13953bp] C - 4 A vs. G 0.283 (A) 0.408 (A) >1 (-) 6 (-) >0.05
rs521512 chr6:32581982 HLA-DQA1 [-13974bp] C - 4 T vs. C 0.283 (C) 0.408 (C) <1 (-) 6 (-) >0.05
rs9271324 chr6:32582482 HLA-DQA1 [-13474bp] C - 4 C vs. G 0.283 (G) 0.408 (G) <1 (-) 8 (-) >0.05
rs9271377 chr6:32587165 HLA-DQA1 [-8791bp] C - 3 T vs. G 0.275 (G) 0.233 (G) >1 (-) 3 (-) >0.05
rs35826015 chr6:32590669 HLA-DQA1 [-5287bp] C - 8 A vs. T 0.142 (A) - >1 (-) 67 (-) >0.05
rs9272232 chr6:32602630 HLA-DQA1 C - 6 T vs. C 0.4 (T) 0.458 (T) >1 (-) 48 (-) >0.05
rs9272163 chr6:32601146 HLA-DQA1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs28383307 chr6:32586755 HLA-DQA1 [-9201bp] C - 3 T vs. C 0.133 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs28752515 chr6:32583603 HLA-DQA1 [-12353bp] C - 4 A vs. G 0.375 (G) 0.417 (A) <1 (-) 0 (-) >0.05
rs9271489 chr6:32589051 HLA-DQA1 [-6905bp] C - 4 A vs. C 0.192 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs17533167 chr6:32590844 HLA-DQA1 [-5112bp] C - 8 C vs. G 0.142 (C) - >1 (-) 67 (-) >0.05
rs28752520 chr6:32584739 HLA-DQA1 [-11217bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs28752523 chr6:32584772 HLA-DQA1 [-11184bp] C - 3 T vs. C - 0.042 (T) <1 (-) 0 (-) >0.05
rs9272071 chr6:32599487 HLA-DQA1 C - 3 C vs. G 0.383 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs9272121 chr6:32600556 HLA-DQA1 C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs9271535 chr6:32589959 HLA-DQA1 [-5997bp] C - 4 T vs. C 0.183 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs9271612 chr6:32591654 HLA-DQA1 [-4302bp] C - 11 A vs. G 0.108 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs28675927 chr6:32603488 HLA-DQA1 C - 5 A vs. G 0.242 (G) 0.275 (G) >1 (-) 68 (-) >0.05
rs28407322 chr6:32603355 HLA-DQA1 C - 5 T vs. C 0.258 (C) 0.275 (C) >1 (-) 69 (-) >0.05
rs9271613 chr6:32591666 HLA-DQA1 [-4290bp] C - 11 T vs. C 0.108 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs9271633 chr6:32592072 HLA-DQA1 [-3884bp] C - 11 T vs. G 0.117 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs9271626 chr6:32591944 HLA-DQA1 [-4012bp] C - 11 A vs. C 0.108 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs9271627 chr6:32591949 HLA-DQA1 [-4007bp] C - 11 T vs. C 0.108 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs28383241 chr6:32584319 HLA-DQA1 [-11637bp] C - 4 A vs. C 0.442 (C) - <1 (-) 0 (-) >0.05
rs9270806 chr6:32569563 HLA-DRB1 [+11938bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs3135003 chr6:32591476 HLA-DQA1 [-4480bp] C - 11 T vs. C 0.117 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs9271524 chr6:32589820 HLA-DQA1 [-6136bp] C - 11 A vs. C 0.117 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs9271528 chr6:32589923 HLA-DQA1 [-6033bp] C - 11 T vs. C 0.117 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs9272242 chr6:32602790 HLA-DQA1 C - 5 T vs. C 0.4 (C) 0.45 (C) <1 (-) 54 (-) >0.05
rs62404084 chr6:32603321 HLA-DQA1 C - 5 T vs. C 0.242 (T) 0.158 (T) <1 (-) 65 (-) >0.05
rs3129763 chr6:32590925 HLA-DQA1 [-5031bp] C - 11 A vs. G 0.117 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs9271541 chr6:32590070 HLA-DQA1 [-5886bp] C - 11 A vs. C 0.117 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs9272062 chr6:32599265 HLA-DQA1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs28864514 chr6:32569431 HLA-DRB1 [+11806bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs9272150 chr6:32601000 HLA-DQA1 C - 3 A vs. T 0.308 (A) 0.35 (A) >1 (-) 44 (-) >0.05
rs9272043 chr6:32598946 HLA-DQA1 C - 3 T vs. G 0.4 (G) 0.467 (G) >1 (-) 0 (-) >0.05
rs17599077 chr6:32591058 HLA-DQA1 [-4898bp] C - 8 A vs. C 0.142 (C) 0.025 (C) <1 (-) 67 (-) >0.05
rs2647060 chr6:32569667 HLA-DRB1 [+12042bp] C - 4 T vs. G 0.1 (T) - <1 (-) 0 (-) >0.05
rs642093 chr6:32582075 HLA-DQA1 [-13881bp] C - 4 A vs. G 0.117 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs28383259 chr6:32585702 HLA-DQA1 [-10254bp] C - 3 A vs. T 0.108 (T) - <1 (-) 0 (-) >0.05
rs28383258 chr6:32585701 HLA-DQA1 [-10255bp] C - 3 A vs. T 0.117 (T) - <1 (-) 0 (-) >0.05
rs9272122 chr6:32600562 HLA-DQA1 C - 4 T vs. C 0.483 (T) 0.333 (T) <1 (-) 44 (-) >0.05
rs2856724 chr6:32585161 HLA-DQA1 [-10795bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]