IZUMO4, chr19:2096380-2099592 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs142519375 chr19:2142215 AP3D1 C - 10 A vs. T - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78080533 chr19:2113909 AP3D1 C - 11 A vs. G 0.025 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs149339216 chr19:2144046 AP3D1 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs117562745 chr19:2136149 AP3D1 C - 12 T vs. C 0.05 (T) - <1 (-) 35 (-) >0.05
rs117443676 chr19:2141943 AP3D1 C - 11 A vs. G 0.025 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs77962077 chr19:2109480 AP3D1 C - 10 A vs. G 0.025 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs74482686 chr19:2140449 AP3D1 C - 12 T vs. C 0.05 (C) - >1 (-) 35 (-) >0.05
rs142841907 chr19:2140514 AP3D1 C - 12 A vs. G - - <1 (-) 35 (-) >0.05
rs75337979 chr19:2111063 AP3D1 C - 11 T vs. C 0.025 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs117962373 chr19:2134936 AP3D1 C - 12 A vs. C 0.05 (A) - <1 (-) 34 (-) >0.05
rs7256023 chr19:2080051 MOB3A C - 11 T vs. C 0.058 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs1106861 chr19:2149000 AP3D1 C - 11 A vs. G - 0.083 (A) <1 (-) 0 (-) >0.05
rs75138150 chr19:2149215 AP3D1 C - 11 A vs. G 0.017 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs2240656 chr19:2116281 AP3D1 C - 11 T vs. C - 0.367 (C) >1 (-) 37 (-) >0.05
rs6510639 chr19:2053669 MKNK2 [+2426bp] C - 12 T vs. C 0.308 (T) 0.392 (T) >1 (-) 27 (-) >0.05
rs145038180 chr19:2143438 AP3D1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs141094497 chr19:2142073 AP3D1 C - 12 A vs. G - - <1 (-) 36 (-) >0.05
rs117731829 chr19:2143716 AP3D1 C - 12 T vs. C 0.05 (T) - <1 (-) 36 (-) >0.05
rs10424965 chr19:2083173 MOB3A C - 11 T vs. C 0.242 (C) 0.175 (C) >1 (-) 12 (-) >0.05
rs2238604 chr19:2144758 AP3D1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs80308009 chr19:2145324 AP3D1 C - 12 A vs. G 0.05 (A) - <1 (-) 36 (-) >0.05
rs1859954 chr19:2145481 AP3D1 C - 12 T vs. G 0.492 (G) 0.408 (T) >1 (-) 0 (-) >0.05
rs117056253 chr19:2129680 AP3D1 C - 12 A vs. G 0.042 (A) - <1 (-) 19 (-) >0.05
rs12610177 chr19:2048281 MKNK2 C - 11 T vs. G 0.3 (T) 0.358 (G) >1 (-) 12 (-) >0.05
rs35391608 chr19:2146066 AP3D1 C - 12 C vs. G 0.05 (G) - >1 (-) 37 (-) >0.05
rs3746101 chr19:2050823 MKNK2 C - 11 T vs. G 0.1 (T) 0.142 (T) >1 (-) 31 (-) >0.05
rs34352198 chr19:2131820 AP3D1 C - 9 A vs. G - - >1 (-) 9 (-) >0.05
rs7255038 chr19:2131790 AP3D1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs2007874 chr19:2131363 AP3D1 C - 12 T vs. C - - <1 (-) 10 (-) >0.05
rs55808750 chr19:2086790 MOB3A C - 11 A vs. T 0.058 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs3786968 chr19:2107663 AP3D1 C - 11 A vs. G - - >1 (-) 29 (-) >0.05
rs72983408 chr19:2089089 MOB3A C - 11 A vs. G 0.042 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs146668143 chr19:2069689 MOB3A [-1348bp] C - 5 T vs. C - - >1 (-) 45 (-) >0.05
rs12460442 chr19:2074594 MOB3A C - 11 C vs. G 0.208 (G) 0.142 (G) >1 (-) 33 (-) >0.05
rs4807203 chr19:2127272 AP3D1 C - 12 A vs. G 0.225 (G) 0.35 (G) >1 (-) 11 (-) >0.05
rs10403078 chr19:2081523 MOB3A C - 11 T vs. G - - >1 (-) 17 (-) >0.05
rs79777512 chr19:2107385 AP3D1 C - 10 T vs. C 0.025 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs2072305 chr19:2123712 AP3D1 C - 12 C vs. G 0.217 (C) 0.367 (C) <1 (-) 13 (-) >0.05
rs4807201 chr19:2120314 AP3D1 C - 12 T vs. C 0.217 (C) 0.383 (C) >1 (-) 13 (-) >0.05
rs734727 chr19:2116466 AP3D1 C - 12 C vs. G 0.217 (C) 0.367 (C) <1 (-) 13 (-) >0.05
rs9676693 chr19:2116400 AP3D1 C - 12 T vs. C 0.217 (T) 0.367 (T) <1 (-) 14 (-) >0.05
rs62129538 chr19:2053795 MKNK2 [+2552bp] C - 10 A vs. G - - >1 (-) 30 (-) >0.05
rs62128365 chr19:2070785 MOB3A [-252bp] C - 11 C vs. G - - >1 (-) 8 (-) >0.05
rs10416900 chr19:2058694 MKNK2 [+7451bp] C - 11 T vs. C 0.233 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs12461951 chr19:2082582 MOB3A C - 11 A vs. G 0.083 (A) 0.075 (A) <1 (-) 7 (-) >0.05
rs2074959 chr19:2111649 AP3D1 C - 12 T vs. C 0.217 (C) 0.367 (C) >1 (-) 18 (-) >0.05
rs4476281 chr19:2072599 MOB3A C - 11 A vs. G 0.333 (A) 0.217 (A) <1 (-) 8 (-) >0.05
rs20567 chr19:2110746 AP3D1 C - 12 A vs. G 0.217 (A) 0.367 (A) <1 (-) 18 (-) >0.05
rs2074958 chr19:2110019 AP3D1 C - 12 T vs. C 0.192 (C) 0.367 (C) >1 (-) 16 (-) >0.05
rs10413398 chr19:2106696 AP3D1 C - 12 T vs. C 0.217 (C) 0.367 (C) >1 (-) 19 (-) >0.05
rs12104154 chr19:2097832 IZUMO4 C - 11 T vs. C 0.083 (T) 0.042 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.