KANSL1, chr17:44107282-44302733 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62062279 chr17:44093964 MAPT All: C 103,235 14 T vs. C - - 1.59 (1.48-1.71) 0 (0-54) 2.31e-35
Meta_image?name=rs62062279

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2696708 chr17:44264943 KANSL1 C - 8 T vs. C 0.217 (C) - >1 (-) 22 (-) <5.00e-08
rs2532247 chr17:44262403 KANSL1 C - 8 T vs. C 0.225 (T) - <1 (-) 24 (-) <5.00e-08
rs1529537 chr17:44064799 MAPT All: C 24,132 9 C vs. T 0.017 (C) - 0.46 (0.38-0.55) 0 (0-62) 1.61e-16
rs2435201 chr17:44078982 MAPT All: C 103,235 14 T vs. A 0.333 (T) 0.467 (T) 0.87 (0.84-0.90) 1 (0-55) 2.46e-16
rs713522 chr17:44065263 MAPT All: C 103,235 14 C vs. T 0.375 (C) 0.4 (T) 0.88 (0.85-0.90) 0 (0-53) 9.62e-16
rs2471737 chr17:44070583 MAPT All: C 103,235 14 G vs. A 0.367 (G) 0.425 (G) 0.88 (0.85-0.91) 0 (0-54) 1.78e-15
rs2732588 chr17:44262950 KANSL1 All: C 88,826 10 G vs. A 0.408 (G) 0.117 (G) 1.23 (1.16-1.29) 6 (0-65) 1.07e-14
rs1528075 chr17:44220454 KANSL1 C - 8 T vs. G 0.217 (G) - >1 (-) 2 (-) <5.00e-08
rs144416125 chr17:44296523 KANSL1 All: C 21,058 7 G vs. A - - 1.60 (1.42-1.81) 2 (0-71) 2.98e-14
rs2668646 chr17:44296522 KANSL1 All: C 21,058 7 T vs. C - - 1.60 (1.42-1.80) 2 (0-71) 2.98e-14
rs2732591 chr17:44266975 KANSL1 All: C 21,058 7 A vs. G 0.167 (A) - 0.60 (0.53-0.68) 7 (0-73) 4.05e-14
rs11652924 chr17:44182267 KANSL1 All: C 103,235 14 C vs. T - - 0.88 (0.85-0.92) 0 (0-42) 1.49e-12
rs9904766 chr17:44186952 KANSL1 All: C 103,235 14 T vs. C 0.417 (T) 0.117 (T) 1.13 (1.09-1.17) 0 (0-40) 6.37e-12
rs62060951 chr17:44271512 KANSL1 C - 5 C vs. G 0.117 (C) - <1 (-) 0 (-) <5.00e-08
rs7521 chr17:44105395 MAPT All: C 103,235 14 A vs. G 0.417 (A) 0.117 (A) 1.12 (1.08-1.15) 0 (0-37) 1.60e-11
rs112000727 chr17:44297236 KANSL1 C - 4 T vs. G - - <1 (-) 44 (-) <5.00e-08
rs8064986 chr17:44119367 KANSL1 All: C 103,235 14 G vs. A - - 0.90 (0.87-0.93) 0 (0-35) 3.74e-11
rs2907489 chr17:44296937 KANSL1 C - 3 T vs. C - - >1 (-) 60 (-) <5.00e-08
rs78442340 chr17:44297049 KANSL1 C - 3 A vs. G - - <1 (-) 60 (-) <5.00e-08
rs2435200 chr17:44071851 MAPT C - 12 A vs. G 0.358 (A) 0.417 (A) <1 (-) 8 (-) <5.00e-08
rs56807059 chr17:44189270 KANSL1 All: C 103,235 14 C vs. A 0.4 (C) 0.1 (C) 1.11 (1.07-1.15) 0 (0-33) 1.87e-09
rs8065825 chr17:44175489 KANSL1 All: C 103,235 14 A vs. G - - 0.90 (0.87-0.93) 0 (0-30) 2.98e-09
rs2732592 chr17:44266982 KANSL1 C - 7 T vs. C 0.433 (T) 0.117 (T) >1 (-) 26 (-) <5.00e-08
rs11653367 chr17:44191483 KANSL1 All: C 97,715 13 G vs. A 0.375 (G) 0.008 (G) 1.12 (1.07-1.16) 0 (0-43) 7.47e-08
rs2532329 chr17:44350090 ARL17B [-2060bp] All: C 8,333 3 A vs. G 0.217 (A) - 0.63 (0.53-0.75) 36 (0-80) 1.01e-07
rs2532330 chr17:44349867 ARL17B [-2283bp] All: C 8,333 3 G vs. A - - 1.58 (1.33-1.87) 44 (0-83) 1.33e-07
rs2696546 chr17:44350919 ARL17B [-1231bp] All: C 8,333 3 C vs. A 0.217 (C) - 0.64 (0.54-0.75) 48 (0-85) 1.47e-07
rs2668617 chr17:44351285 ARL17B [-865bp] All: C 8,333 3 A vs. G - - 1.57 (1.33-1.85) 48 (0-85) 1.54e-07
rs2696542 chr17:44351533 ARL17B [-617bp] All: C 8,333 3 G vs. A 0.217 (G) - 0.64 (0.54-0.76) 48 (0-85) 1.56e-07
rs2732708 chr17:44351387 ARL17B [-763bp] All: C 8,333 3 T vs. C 0.208 (T) - 0.64 (0.54-0.76) 48 (0-85) 1.57e-07
rs8068300 chr17:44202690 KANSL1 C - 11 T vs. C 0.417 (T) 0.117 (T) >1 (-) 0 (-) <1.00e-06
rs2732705 chr17:44351929 ARL17B [-221bp] C - 3 T vs. G 0.217 (G) - >1 (-) 51 (-) <1.00e-06
rs2732706 chr17:44351686 ARL17B [-464bp] All: C 8,333 3 T vs. C 0.217 (T) - 0.64 (0.54-0.76) 51 (0-86) 1.66e-07
rs2732712 chr17:44348932 ARL17B [-3218bp] All: C 8,333 3 G vs. T 0.217 (G) - 0.61 (0.51-0.73) 52 (0-86) 1.69e-07
rs2016034 chr17:44189598 KANSL1 C - 12 A vs. G - - >1 (-) 0 (-) <1.00e-06
rs2668622 chr17:44352131 ARL17B [-19bp] All: C 8,333 3 T vs. G 0.217 (T) - 0.64 (0.54-0.76) 53 (0-86) 1.77e-07
rs2732713 chr17:44348593 ARL17B [-3557bp] All: C 8,333 3 G vs. A 0.217 (G) - 0.61 (0.51-0.73) 54 (0-87) 1.82e-07
rs2158258 chr17:44163809 KANSL1 C - 12 A vs. C 0.417 (A) 0.117 (A) >1 (-) 0 (-) <1.00e-06
rs2429439 chr17:44348221 ARL17B [-3929bp] All: C 8,333 3 A vs. G - - 1.65 (1.36-1.99) 56 (0-88) 2.00e-07
rs2429438 chr17:44348265 ARL17B [-3885bp] C - 3 C vs. G 0.233 (C) - <1 (-) 55 (-) <1.00e-06
rs2696555 chr17:44348370 ARL17B [-3780bp] All: C 8,333 3 G vs. A 0.217 (G) - 0.61 (0.50-0.73) 56 (0-87) 2.02e-07
rs2696557 chr17:44347218 ARL17B [-4932bp] All: C 8,333 3 A vs. C 0.208 (A) - 0.60 (0.50-0.73) 57 (0-88) 2.04e-07
rs11654640 chr17:44162230 KANSL1 C - 12 A vs. G 0.4 (G) 0.117 (G) <1 (-) 0 (-) <1.00e-06
rs2696537 chr17:44352621 ARL17B All: C 8,333 3 G vs. A 0.217 (G) - 0.65 (0.55-0.76) 58 (0-88) 2.69e-07
rs2668623 chr17:44352361 ARL17B All: C 8,333 3 C vs. T - - 1.56 (1.31-1.84) 58 (0-88) 2.74e-07
rs11079732 chr17:44161581 KANSL1 C - 12 T vs. C - - >1 (-) 0 (-) <1.00e-06
rs2696588 chr17:44222424 KANSL1 C - 9 C vs. G 0.425 (G) 0.108 (G) <1 (-) 10 (-) <1.00e-06
rs9674888 chr17:44224272 KANSL1 C - 9 A vs. G 0.442 (G) 0.117 (G) <1 (-) 5 (-) <1.00e-06
rs74521229 chr17:44173215 KANSL1 All: C 97,715 13 C vs. T 0.242 (C) - 1.15 (1.09-1.21) 0 (0-53) 5.63e-07
rs4792827 chr17:44131305 KANSL1 C - 12 T vs. C 0.408 (T) 0.117 (T) >1 (-) 0 (-) <1.00e-06

Association studies for this region [+]