LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7971935 chr12:40670394 LRRK2 C - 13 A vs. G 0.075 (A) - <1 (-) 0 (-) <0.05
rs11175454 chr12:40566925 LRRK2 [-23621bp] C - 13 T vs. C 0.15 (T) 0.083 (T) <1 (-) 0 (-) <0.05
rs11175769 chr12:40656179 LRRK2 C - 13 A vs. G 0.433 (A) 0.333 (G) <1 (-) 20 (-) <0.05
rs117224507 chr12:40754102 LRRK2 C - 8 A vs. G 0.017 (G) - <1 (-) 12 (-) <0.05
rs10784461 chr12:40657537 LRRK2 C - 13 A vs. G 0.433 (A) 0.333 (G) <1 (-) 21 (-) <0.05
rs17443064 chr12:40568463 LRRK2 [-22083bp] C - 9 A vs. G - - <1 (-) 8 (-) <0.05
rs1388590 chr12:40547709 LRRK2 [-42837bp] C - 13 T vs. C 0.483 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs10784462 chr12:40657771 LRRK2 C - 13 C vs. G 0.433 (C) 0.333 (G) <1 (-) 20 (-) >0.05
rs111341533 chr12:40660738 LRRK2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2638262 chr12:40547046 LRRK2 [-43500bp] C - 13 A vs. G 0.458 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs4293189 chr12:40657225 LRRK2 C - 13 A vs. G 0.458 (G) 0.325 (A) >1 (-) 22 (-) >0.05
rs2638263 chr12:40546800 LRRK2 [-43746bp] C - 13 A vs. T 0.467 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs2708493 chr12:40568206 LRRK2 [-22340bp] C - 13 A vs. G 0.475 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs1388589 chr12:40553285 LRRK2 [-37261bp] C - 13 A vs. T 0.483 (T) 0.317 (T) >1 (-) 0 (-) >0.05
rs2638257 chr12:40553558 LRRK2 [-36988bp] C - 13 A vs. G 0.467 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs716231 chr12:40552202 LRRK2 [-38344bp] C - 13 C vs. G 0.483 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs2708464 chr12:40552264 LRRK2 [-38282bp] C - 13 T vs. C 0.475 (T) 0.283 (T) <1 (-) 0 (-) >0.05
rs2638258 chr12:40552256 LRRK2 [-38290bp] C - 13 A vs. G 0.475 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs2708473 chr12:40556860 LRRK2 [-33686bp] C - 13 A vs. G 0.483 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs11564149 chr12:40702164 LRRK2 C - 13 T vs. C 0.083 (T) - <1 (-) 0 (-) >0.05
rs41286474 chr12:40704557 LRRK2 C - 13 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs4363681 chr12:40554055 LRRK2 [-36491bp] C - 13 T vs. C 0.458 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs11564214 chr12:40554016 LRRK2 [-36530bp] C - 8 A vs. G - 0.05 (A) >1 (-) 0 (-) >0.05
rs2708466 chr12:40554859 LRRK2 [-35687bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2708474 chr12:40557238 LRRK2 [-33308bp] C - 13 A vs. C 0.483 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs1491931 chr12:40545096 SLC2A13 [+45205bp] C - 13 T vs. C 0.467 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs17444089 chr12:40719806 LRRK2 C - 13 C vs. G 0.067 (C) - <1 (-) 0 (-) >0.05
rs76680676 chr12:40562530 LRRK2 [-28016bp] C - 13 A vs. T 0.158 (A) - <1 (-) 11 (-) >0.05
rs17465400 chr12:40565168 LRRK2 [-25378bp] C - 13 A vs. C 0.142 (A) - <1 (-) 11 (-) >0.05
rs1491926 chr12:40564921 LRRK2 [-25625bp] C - 13 A vs. C 0.158 (C) - >1 (-) 6 (-) >0.05
rs2708480 chr12:40558756 LRRK2 [-31790bp] C - 13 A vs. G 0.475 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs113772607 chr12:40701831 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs140522254 chr12:40699521 LRRK2 C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs2708485 chr12:40560203 LRRK2 [-30343bp] C - 13 A vs. G 0.483 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs2638245 chr12:40572147 LRRK2 [-18399bp] C - 13 T vs. C 0.483 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs17466500 chr12:40723342 LRRK2 C - 5 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs728622 chr12:40561679 LRRK2 [-28867bp] C - 13 A vs. G 0.483 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs17461492 chr12:40579900 LRRK2 [-10646bp] C - 13 A vs. T 0.158 (A) - <1 (-) 12 (-) >0.05
rs55993200 chr12:40582704 LRRK2 [-7842bp] C - 13 A vs. G 0.158 (A) 0.008 (A) <1 (-) 12 (-) >0.05
rs117549742 chr12:40584971 LRRK2 [-5575bp] C - 13 T vs. G 0.15 (T) - <1 (-) 12 (-) >0.05
rs117862713 chr12:40585056 LRRK2 [-5490bp] C - 13 T vs. C 0.158 (T) - <1 (-) 12 (-) >0.05
rs10506145 chr12:40545618 LRRK2 [-44928bp] C - 12 T vs. G 0.167 (T) - <1 (-) 11 (-) >0.05
rs1948380 chr12:40562906 LRRK2 [-27640bp] C - 13 T vs. C 0.492 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs17443112 chr12:40573629 LRRK2 [-16917bp] C - 13 T vs. C 0.158 (C) - >1 (-) 12 (-) >0.05
rs17465540 chr12:40587700 LRRK2 [-2846bp] C - 13 A vs. G 0.158 (G) - >1 (-) 12 (-) >0.05
rs74567731 chr12:40554668 LRRK2 [-35878bp] C - 13 C vs. G 0.158 (G) - >1 (-) 7 (-) >0.05
rs1491927 chr12:40564874 LRRK2 [-25672bp] C - 13 A vs. G 0.483 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs11176053 chr12:40724030 LRRK2 C - 13 T vs. C 0.258 (T) 0.125 (T) >1 (-) 22 (-) >0.05
rs11176052 chr12:40723900 LRRK2 C - 13 T vs. C 0.258 (T) 0.125 (T) >1 (-) 22 (-) >0.05
rs2638249 chr12:40565298 LRRK2 [-25248bp] C - 13 A vs. C 0.483 (A) 0.267 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]