LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs728623 chr12:40562013 LRRK2 [-28533bp] C - 13 A vs. G 0.483 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs1844922 chr12:40583099 LRRK2 [-7447bp] C - 13 T vs. G 0.483 (G) 0.267 (G) >1 (-) 0 (-) >0.05
rs12423566 chr12:40807398 MUC19 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs144326430 chr12:40644433 LRRK2 C - 13 T vs. G - - >1 (-) 12 (-) >0.05
rs144576541 chr12:40592695 LRRK2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2708492 chr12:40566850 LRRK2 [-23696bp] C - 13 A vs. G 0.483 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs2708491 chr12:40566219 LRRK2 [-24327bp] C - 13 T vs. G 0.483 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs147543751 chr12:40542870 SLC2A13 [+42979bp] C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs17461387 chr12:40551390 LRRK2 [-39156bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs17466486 chr12:40722549 LRRK2 C - 13 A vs. C 0.058 (A) - <1 (-) 0 (-) >0.05
rs11564129 chr12:40669939 LRRK2 C - 13 T vs. C 0.075 (C) - >1 (-) 0 (-) >0.05
rs11564117 chr12:40551564 LRRK2 [-38982bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs75748985 chr12:40546878 LRRK2 [-43668bp] C - 13 A vs. T 0.167 (T) - >1 (-) 6 (-) >0.05
rs10506152 chr12:40723475 LRRK2 C - 13 A vs. T 0.05 (A) - <1 (-) 0 (-) >0.05
rs4604959 chr12:40590338 LRRK2 [-208bp] C - 12 C vs. G - - <1 (-) 13 (-) >0.05
rs78801254 chr12:40549663 LRRK2 [-40883bp] C - 13 T vs. C 0.158 (T) - <1 (-) 8 (-) >0.05
rs1352876 chr12:40549708 LRRK2 [-40838bp] C - 13 T vs. C 0.483 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs11175766 chr12:40655016 LRRK2 C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs1873612 chr12:40552451 LRRK2 [-38095bp] C - 13 C vs. G 0.475 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs11175780 chr12:40659096 LRRK2 C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs17483919 chr12:40555574 LRRK2 [-34972bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs112402829 chr12:40571290 LRRK2 [-19256bp] C - 9 A vs. T - - <1 (-) 0 (-) >0.05
rs75923620 chr12:40778389 MUC19 [-8808bp] C - 4 A vs. C 0.008 (A) - >1 (-) 0 (-) >0.05
rs17442805 chr12:40541876 SLC2A13 [+41985bp] C - 13 A vs. C 0.158 (C) - >1 (-) 6 (-) >0.05
rs113943383 chr12:40574814 LRRK2 [-15732bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs17443345 chr12:40609885 LRRK2 C - 13 T vs. C 0.142 (T) - <1 (-) 0 (-) >0.05
rs2046928 chr12:40652394 LRRK2 C - 13 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs12426643 chr12:40560267 LRRK2 [-30279bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs7132073 chr12:40711094 LRRK2 C - 12 A vs. T 0.067 (T) - >1 (-) 0 (-) >0.05
rs17466185 chr12:40684622 LRRK2 C - 13 T vs. G 0.075 (G) - >1 (-) 0 (-) >0.05
rs35507033 chr12:40707778 LRRK2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs1844921 chr12:40587702 LRRK2 [-2844bp] C - 13 T vs. C 0.475 (C) 0.3 (C) >1 (-) 0 (-) >0.05
chr12:40639679 chr12:40639679 LRRK2 C - 11 T vs. C - - >1 (-) 26 (-) >0.05
rs144476873 chr12:40566094 LRRK2 [-24452bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs17519881 chr12:40682197 LRRK2 C - 13 C vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs1491922 chr12:40591173 LRRK2 C - 13 T vs. C 0.342 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs148931749 chr12:40687005 LRRK2 C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs145871599 chr12:40599507 LRRK2 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs1388599 chr12:40640160 LRRK2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4767975 chr12:40795865 MUC19 C - 13 A vs. C 0.233 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs4767974 chr12:40795852 MUC19 C - 13 T vs. G 0.233 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs4768250 chr12:40796351 MUC19 C - 13 T vs. G 0.25 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs118076169 chr12:40653993 LRRK2 C - 10 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs79723855 chr12:40586532 LRRK2 [-4014bp] C - 11 T vs. G 0.008 (T) - >1 (-) 44 (-) >0.05
rs77184916 chr12:40584452 LRRK2 [-6094bp] C - 11 A vs. C 0.033 (A) - <1 (-) 0 (-) >0.05
rs10784444 chr12:40633488 LRRK2 C - 12 A vs. G 0.358 (G) 0.367 (A) >1 (-) 0 (-) >0.05
rs116911375 chr12:40679388 LRRK2 C - 12 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs17465751 chr12:40620881 LRRK2 C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs12581617 chr12:40575092 LRRK2 [-15454bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs10878434 chr12:40758291 LRRK2 C - 13 A vs. G 0.183 (A) 0.242 (A) >1 (-) 56 (-) >0.05

Association studies for this region [+]