LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs144319082 chr12:40728630 LRRK2 C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs138152936 chr12:40569786 LRRK2 [-20760bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs10878340 chr12:40695095 LRRK2 C - 13 A vs. G - - <1 (-) 3 (-) >0.05
rs10878245 chr12:40631791 LRRK2 C - 13 T vs. C 0.383 (T) 0.367 (C) <1 (-) 0 (-) >0.05
rs2404834 chr12:40729007 LRRK2 C - 13 T vs. C 0.108 (T) - <1 (-) 0 (-) >0.05
rs10784587 chr12:40790363 MUC19 C - 13 A vs. G 0.233 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs2217148 chr12:40789725 MUC19 C - 13 A vs. T 0.233 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs17466044 chr12:40675346 LRRK2 C - 13 A vs. G 0.033 (G) - <1 (-) 8 (-) >0.05
rs139309093 chr12:40570870 LRRK2 [-19676bp] C - 7 A vs. C - - >1 (-) 0 (-) >0.05
rs113553365 chr12:40588898 LRRK2 [-1648bp] C - 12 A vs. C 0.017 (A) - <1 (-) 11 (-) >0.05
rs73107108 chr12:40746073 LRRK2 C - 13 T vs. C 0.108 (C) - >1 (-) 0 (-) >0.05
rs4768242 chr12:40774662 LRRK2 [+11575bp] C - 13 C vs. G 0.117 (C) - <1 (-) 0 (-) >0.05
rs74590475 chr12:40571951 LRRK2 [-18595bp] C - 7 T vs. C - 0.042 (C) <1 (-) 0 (-) >0.05
rs73107145 chr12:40773804 LRRK2 [+10717bp] C - 12 A vs. T 0.117 (A) - <1 (-) 0 (-) >0.05
rs73107146 chr12:40773852 LRRK2 [+10765bp] C - 12 A vs. G 0.117 (G) - >1 (-) 0 (-) >0.05
rs114392445 chr12:40622501 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17443234 chr12:40589829 LRRK2 [-717bp] C - 11 T vs. G 0.033 (T) - <1 (-) 0 (-) >0.05
rs1019709 chr12:40802150 MUC19 C - 13 A vs. G 0.367 (G) 0.458 (A) >1 (-) 18 (-) >0.05
rs10878224 chr12:40614601 LRRK2 C - 13 T vs. C 0.467 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs78774467 chr12:40711634 LRRK2 C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs954884 chr12:40632958 LRRK2 C - 13 T vs. G 0.358 (G) 0.367 (T) >1 (-) 0 (-) >0.05
chr12:40601800 chr12:40601800 LRRK2 C - 11 A vs. G - - >1 (-) 2 (-) >0.05
rs148601012 chr12:40572530 LRRK2 [-18016bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs79400217 chr12:40690517 LRRK2 C - 13 A vs. C 0.033 (A) - >1 (-) 20 (-) >0.05
rs78084641 chr12:40759896 LRRK2 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs4768221 chr12:40597545 LRRK2 C - 13 T vs. G 0.458 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs2723261 chr12:40601808 LRRK2 C - 13 T vs. C 0.333 (C) 0.358 (C) >1 (-) 0 (-) >0.05
rs4767967 chr12:40597869 LRRK2 C - 13 T vs. C 0.467 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs17491466 chr12:40731853 LRRK2 C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs1602578 chr12:40613997 LRRK2 C - 13 T vs. G 0.467 (G) - >1 (-) 0 (-) >0.05
rs12425561 chr12:40574355 LRRK2 [-16191bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs149545691 chr12:40721409 LRRK2 C - 9 A vs. G - - >1 (-) 33 (-) >0.05
rs11175656 chr12:40623755 LRRK2 C - 13 A vs. G - 0.167 (A) <1 (-) 0 (-) >0.05
rs150606290 chr12:40667467 LRRK2 C - 9 A vs. G - - <1 (-) 29 (-) >0.05
rs17444368 chr12:40775736 MUC19 [-11461bp] C - 13 A vs. G 0.117 (G) - >1 (-) 0 (-) >0.05
rs17466886 chr12:40783158 MUC19 [-4039bp] C - 13 T vs. C 0.233 (T) - >1 (-) 0 (-) >0.05
rs144463374 chr12:40660880 LRRK2 C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs147973391 chr12:40595721 LRRK2 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs73107149 chr12:40776460 MUC19 [-10737bp] C - 13 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs117825255 chr12:40549128 LRRK2 [-41418bp] C - 11 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs10784599 chr12:40802840 MUC19 C - 13 T vs. C 0.117 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs117018477 chr12:40667853 LRRK2 C - 11 A vs. C 0.008 (A) - >1 (-) 0 (-) >0.05
rs73107147 chr12:40775244 MUC19 [-11953bp] C - 13 T vs. C 0.117 (C) - >1 (-) 0 (-) >0.05
rs4768241 chr12:40774519 LRRK2 [+11432bp] C - 13 T vs. C 0.117 (C) - >1 (-) 0 (-) >0.05
rs1491940 chr12:40598344 LRRK2 C - 13 A vs. T 0.333 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs17466745 chr12:40772927 LRRK2 [+9840bp] C - 13 T vs. C 0.117 (C) - >1 (-) 0 (-) >0.05
rs17466724 chr12:40772342 LRRK2 [+9255bp] C - 13 T vs. G 0.117 (T) - <1 (-) 0 (-) >0.05
rs10748014 chr12:40615069 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs111418867 chr12:40555821 LRRK2 [-34725bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs17443958 chr12:40711889 LRRK2 C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]